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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TYRO3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
17.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
16.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
12.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
7.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
6.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
6.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
6.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
5.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
5.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
5.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
4.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
4.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
4.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
4.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
3.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
3.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
3.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
3.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
3.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
2.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
2.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
2.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
2.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
2.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
0.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
0.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
0.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
0.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
0.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
0.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
0.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
0.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
0.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
0.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
0.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
0.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
0.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
0.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
0.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
0.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
0.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
0.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
0.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
0.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
0.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
0.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
0.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
0.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
0.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
0.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
0.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
0.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
0.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
0.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
0.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
0.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
0.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
0.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
0.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
0.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
0.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
0.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
0.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
0.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TYRO3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.0
Number of samples
231
Samples
Sample
Description
TPM
DO45277
0 years, male, NA, stage:3, alive, 600 days
23.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
13.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
13.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
12.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
11.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
9.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
5.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
5.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
4.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
4.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
4.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
3.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
3.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
2.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
2.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
2.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
2.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
2.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
2.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
2.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
2.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
2.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
2.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
1.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
1.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
1.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
1.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
1.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
1.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
1.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
1.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
1.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
1.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
1.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
1.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
1.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
1.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
1.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
1.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
1.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
1.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
1.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
1.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
1.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
1.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
1.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
1.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
1.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
1.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
1.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
1.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
0.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
0.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
0.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
0.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
0.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
0.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
0.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
0.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
0.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
0.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
0.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
0.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
0.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
0.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
0.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
0.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
0.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
0.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
0.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
0.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
0.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
0.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
0.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
0.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
0.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
0.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
0.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
0.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
0.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
0.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
0.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
0.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
0.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
0.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
0.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
0.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
0.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
0.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
0.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
0.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
277
Tumor
1.0
983
Tumor
0.9
147
Tumor
0.8
536
Normal
0.8
494
Normal
0.8
257
Tumor
0.8
915
Tumor
0.7
271
Tumor
0.7
884
Normal
0.7
131
Tumor
0.7
818
Normal
0.7
497
Tumor
0.6
484
Normal
0.6
488
Normal
0.6
285
Tumor
0.6
1045
Tumor
0.6
435
Tumor
0.5
358
Normal
0.5
573
Tumor
0.5
944
Normal
0.5
231
Tumor
0.5
535
Tumor
0.5
912
Normal
0.5
367
Tumor
0.5
428
Normal
0.5
954
Normal
0.5
938
Normal
0.5
352
Normal
0.5
467
Tumor
0.5
1046
Normal
0.5
487
Tumor
0.5
297
Tumor
0.5
823
Tumor
0.4
882
Normal
0.4
715
Tumor
0.4
492
Normal
0.4
331
Tumor
0.4
313
Tumor
0.4
952
Normal
0.4
878
Normal
0.4
361
Tumor
0.4
395
Tumor
0.4
491
Tumor
0.4
956
Normal
0.4
227
Tumor
0.4
913
Tumor
0.4
172
Normal
0.4
526
Normal
0.3
1044
Normal
0.3
914
Normal
0.3
343
Tumor
0.3
473
Tumor
0.3
867
Tumor
0.3
685
Tumor
0.3
344
Normal
0.3
498
Normal
0.3
877
Tumor
0.3
267
Tumor
0.3
976
Normal
0.3
493
Tumor
0.3
671
Tumor
0.3
917
Tumor
0.3
951
Tumor
0.3
911
Tumor
0.3
874
Normal
0.3
354
Normal
0.3
567
Tumor
0.3
862
Normal
0.3
861
Tumor
0.3
342
Normal
0.3
444
Normal
0.3
514
Normal
0.3
448
Normal
0.3
452
Normal
0.3
661
Tumor
0.3
816
Normal
0.3
964
Normal
0.3
518
Normal
0.3
924
Normal
0.3
958
Normal
0.2
357
Tumor
0.2
385
Tumor
0.2
863
Tumor
0.2
963
Tumor
0.2
311
Tumor
0.2
341
Tumor
0.2
524
Normal
0.2
868
Normal
0.2
365
Tumor
0.2
817
Tumor
0.2
443
Tumor
0.2
916
Normal
0.2
866
Normal
0.2
926
Normal
0.2
713
Tumor
0.2
464
Normal
0.2
824
Normal
0.2
883
Tumor
0.2
1025
Tumor
0.2
186
Normal
0.2
375
Tumor
0.2
857
Tumor
0.2
918
Normal
0.2
953
Tumor
0.2
463
Tumor
0.2
446
Normal
0.2
1041
Tumor
0.2
451
Tumor
0.2
698
Normal
0.2
161
Tumor
0.1
124
Normal
0.1
1028
Normal
0.1
447
Tumor
0.1
135
Tumor
0.1
466
Normal
0.1
434
Normal
0.1
923
Tumor
0.1
977
Tumor
0.1
666
Normal
0.1
881
Tumor
0.1
424
Normal
0.1
456
Normal
0.1
858
Normal
0.1
141
Tumor
0.1
362
Normal
0.1
384
Normal
0.1
376
Normal
0.1
966
Normal
0.1
943
Tumor
0.1
394
Normal
0.1
955
Tumor
0.1
921
Tumor
0.1
672
Normal
0.1
516
Normal
0.1
212
Normal
0.1
146
Normal
0.1
436
Normal
0.1
286
Normal
0.1
185
Tumor
0.1
483
Tumor
0.1
366
Normal
0.1
525
Tumor
0.1
478
Normal
0.1
368
Normal
0.1
455
Tumor
0.1
383
Tumor
0.1
864
Normal
0.1
432
Normal
0.1
162
Normal
0.1
922
Normal
0.1
968
Normal
0.1
468
Normal
0.1
571
Tumor
0.0
188
Normal
0.0
128
Normal
0.0
224
Normal
0.0
1026
Normal
0.0
284
Normal
0.0
433
Tumor
0.0
852
Normal
0.0
142
Normal
0.0
228
Normal
0.0
851
Tumor
0.0
1022
Normal
0.0
662
Normal
0.0
967
Tumor
0.0
1042
Normal
0.0
353
Tumor
0.0
665
Tumor
0.0
697
Tumor
0.0
984
Normal
0.0
557
Tumor
0.0
1032
Normal
0.0
664
Normal
0.0
127
Tumor
0.0
982
Normal
0.0
171
Tumor
0.0
111
Normal
0.0
145
Tumor
0.0
1013
Tumor
0.0
925
Tumor
-0.1
445
Tumor
-0.1
312
Normal
-0.1
393
Tumor
-0.1
148
Normal
-0.1
223
Tumor
-0.1
471
Tumor
-0.1
965
Tumor
-0.1
716
Normal
-0.1
283
Tumor
-0.1
937
Tumor
-0.1
126
Normal
-0.1
714
Normal
-0.1
722
Normal
-0.1
187
Tumor
-0.1
686
Normal
-0.1
515
Tumor
-0.1
482
Normal
-0.1
396
Normal
-0.1
477
Tumor
-0.1
112
Tumor
-0.1
211
Tumor
-0.1
574
Normal
-0.1
648
Normal
-0.1
332
Normal
-0.1
1031
Tumor
-0.1
268
Normal
-0.1
123
Tumor
-0.1
351
Tumor
-0.2
138
Normal
-0.2
461
Tumor
-0.2
1016
Normal
-0.2
462
Normal
-0.2
132
Normal
-0.2
696
Normal
-0.2
517
Tumor
-0.2
1014
Normal
-0.2
663
Tumor
-0.2
523
Tumor
-0.2
388
Normal
-0.2
392
Normal
-0.2
272
Normal
-0.2
425
Tumor
-0.2
865
Tumor
-0.2
136
Normal
-0.2
232
Normal
-0.2
386
Normal
-0.2
472
Normal
-0.2
262
Normal
-0.2
125
Tumor
-0.2
474
Normal
-0.2
278
Normal
-0.2
114
Normal
-0.3
391
Tumor
-0.3
258
Normal
-0.3
981
Tumor
-0.3
873
Tumor
-0.3
647
Tumor
-0.3
298
Normal
-0.3
721
Tumor
-0.3
137
Tumor
-0.3
978
Normal
-0.3
431
Tumor
-0.3
815
Tumor
-0.3
261
Tumor
-0.3
558
Normal
-0.3
314
Normal
-0.3
387
Tumor
-0.3
572
Normal
-0.4
1015
Tumor
-0.4
481
Tumor
-0.4
957
Tumor
-0.4
422
Normal
-0.4
564
Normal
-0.4
1043
Tumor
-0.4
465
Tumor
-0.4
113
Tumor
-0.4
568
Normal
-0.4
563
Tumor
-0.4
975
Tumor
-0.5
427
Tumor
-0.5
413
Tumor
-0.5
414
Normal
-0.5
1021
Tumor
-0.5
513
Tumor
-0.6
1027
Tumor
-0.6
423
Tumor
-0.6
421
Tumor
-0.7
426
Normal
-0.8
695
Tumor
-0.8
355
Tumor
N/A
356
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
737
Tumor
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
534
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
785
Tumor
N/A
786
Normal
N/A
545
Tumor
N/A
546
Normal
N/A
553
Tumor
N/A
554
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
