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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.2
nTPM
HPA Brain:
63.4
nTPM
GTEx:
40.2
nTPM
FANTOM5:
128.3
Scaled Tags Per Million
Pig:
38.6
nTPM
Mouse:
44.3
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
63.4
Sample id
Sample description
nTPM
Amygdala nTPM: 63.4
2695
Female, age 67, right hemisphere
74.1
2814
Male, age 76, right hemisphere
69.2
2514
Male, age 75, right hemisphere
64.5
1987
Female, age 91, left hemisphere
58.9
2517
Female, age 94, left hemisphere
50.1
Basal amygdala nTPM: 52.3
2609
Male, age 75, right hemisphere
61.6
1955
Male, age 76, both hemispheres
56.8
2827
Female, age 67, right hemisphere
53.9
2110
Male, age 80, left hemisphere
50.6
2243
Female, age 91, right hemisphere
47.0
2685
Female, age 94, left hemisphere
44.2
Central amygdala nTPM: 55.6
2515
Male, age 75, right hemisphere
62.4
1905
Male, age 76, both hemispheres
61.1
2826
Female, age 94, left hemisphere
59.6
2239
Male, age 80, left hemisphere
50.2
2701
Female, age 91, right hemisphere
44.9
Corticomedial amygdala nTPM: 53.0
2428
Male, age 75, right hemisphere
59.2
2240
Male, age 76, both hemispheres
57.6
2829
Male, age 80, left hemisphere
54.5
2242
Female, age 91, right hemisphere
51.1
2429
Female, age 94, left hemisphere
48.6
2535
Female, age 67, right hemisphere
46.9
Lateral amygdala nTPM: 55.8
2516
Male, age 75, right hemisphere
64.9
2830
Female, age 67, right hemisphere
63.7
1883
Male, age 76, both hemispheres
58.9
2534
Female, age 94, left hemisphere
55.6
2256
Male, age 80, left hemisphere
50.1
2255
Female, age 91, right hemisphere
41.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
40.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.2
Samples: 152
Max nTPM: 75.6
Min nTPM: 25.4
Std nTPM: 8.6
Median nTPM: 38.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
75.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
71.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
66.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
64.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
64.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
58.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
57.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
56.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
54.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
54.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
53.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
52.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
52.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
52.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
50.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
49.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
49.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
48.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
48.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
46.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
46.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
46.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
46.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
46.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
45.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
45.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
45.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
45.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
45.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
45.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
44.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
44.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
44.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
44.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
43.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
43.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
43.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
43.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
43.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
43.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
43.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
43.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
42.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
42.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
42.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
42.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
41.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
41.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
40.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
40.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
40.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
40.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
40.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
40.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
40.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
40.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
40.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
39.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
39.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
39.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
39.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
39.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
39.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
39.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
39.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
38.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
38.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
38.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
38.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
38.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
38.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
38.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
38.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
38.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
38.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
38.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
38.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
37.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
37.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
37.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
37.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
37.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
37.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
37.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
36.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
36.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
36.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
36.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
36.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
36.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
36.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
35.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
35.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
35.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
35.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
35.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
35.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
35.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
35.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
34.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
34.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
34.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
34.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
34.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
33.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
33.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
33.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
33.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
33.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
33.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
33.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
33.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
32.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
32.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
32.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
32.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
32.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
31.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
31.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
31.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
30.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
30.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
30.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
30.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
30.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
30.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
30.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
29.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
29.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
29.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
27.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
27.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
26.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
25.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
