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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAEA is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
67.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
57.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
57.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
55.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
53.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
50.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
49.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
47.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
46.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
45.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
44.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
44.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
43.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
43.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
42.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
41.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
40.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
40.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
39.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
38.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
37.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
37.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
37.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
36.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
35.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
34.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
34.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
34.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
33.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
33.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
33.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
33.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
32.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
32.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
32.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
32.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
32.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
32.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
30.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
29.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
29.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
29.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
29.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
29.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
29.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
29.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
29.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
28.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
28.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
28.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
28.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
28.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
28.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
27.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
27.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
27.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
27.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
27.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
26.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
26.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
25.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
25.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
25.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
25.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
24.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
24.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
24.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
24.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
23.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
23.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
23.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
23.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
22.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
22.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
22.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
22.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
22.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
22.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
21.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
21.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
21.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
21.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
21.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
21.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
21.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
21.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
21.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
21.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
21.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
20.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
20.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
20.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
20.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
20.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
20.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
20.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
20.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
20.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
20.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
20.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
20.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
20.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
20.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
19.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
19.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
19.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
19.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
19.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
19.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
19.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
19.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
19.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
19.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
18.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
18.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
18.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
18.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
18.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
18.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
18.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
18.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
18.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
18.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
18.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
18.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
18.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
17.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
17.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
17.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
17.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
17.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
17.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
17.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
17.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
17.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
16.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
16.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
16.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
16.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
16.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
16.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
16.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
16.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
16.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
16.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
15.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
15.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
15.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
15.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
15.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
15.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
15.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
15.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
15.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
15.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
15.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
15.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
14.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
14.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
14.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
14.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
14.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
14.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
14.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
14.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
14.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
14.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
13.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
13.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
13.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
13.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
12.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
12.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
12.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
12.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
11.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
11.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAEA is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
60.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
57.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
54.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
51.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
45.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
45.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
45.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
40.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
38.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
38.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
34.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
34.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
33.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
32.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
31.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
31.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
30.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
30.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
30.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
29.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
29.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
29.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
29.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
29.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
29.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
29.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
28.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
28.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
28.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
28.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
27.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
27.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
26.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
26.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
26.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
26.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
26.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
26.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
26.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
25.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
25.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
24.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
24.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
24.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
23.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
23.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
23.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
23.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
23.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
23.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
23.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
22.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
22.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
22.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
22.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
22.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
22.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
22.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
22.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
21.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
21.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
21.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
21.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
21.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
21.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
21.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
21.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
20.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
20.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
20.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
20.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
19.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
19.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
19.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
19.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
19.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
18.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
18.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
18.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
18.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
17.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
17.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
17.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
17.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
17.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
17.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
17.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
17.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
17.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
16.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
16.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
16.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
16.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
16.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
16.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
16.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
16.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
15.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
15.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
15.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
15.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
15.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
14.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
14.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
14.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
14.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
14.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
14.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
14.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
14.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
12.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
11.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
473
Tumor
0.8
283
Tumor
0.8
147
Tumor
0.7
685
Tumor
0.7
141
Tumor
0.6
777
Tumor
0.6
357
Tumor
0.6
745
Tumor
0.6
491
Tumor
0.6
951
Tumor
0.6
1025
Tumor
0.5
211
Tumor
0.5
387
Tumor
0.5
131
Tumor
0.5
713
Tumor
0.4
863
Tumor
0.4
517
Tumor
0.4
1041
Tumor
0.4
553
Tumor
0.4
557
Tumor
0.4
977
Tumor
0.4
1027
Tumor
0.4
375
Tumor
0.4
965
Tumor
0.4
343
Tumor
0.4
1013
Tumor
0.4
497
Tumor
0.4
957
Tumor
0.4
817
Tumor
0.4
785
Tumor
0.4
743
Tumor
0.4
1031
Tumor
0.4
385
Tumor
0.4
285
Tumor
0.4
661
Tumor
0.4
715
Tumor
0.4
277
Tumor
0.3
471
Tumor
0.3
493
Tumor
0.3
724
Normal
0.3
917
Tumor
0.3
823
Tumor
0.3
911
Tumor
0.3
665
Tumor
0.3
861
Tumor
0.3
865
Tumor
0.3
627
Tumor
0.3
953
Tumor
0.3
395
Tumor
0.3
641
Tumor
0.3
487
Tumor
0.3
313
Tumor
0.3
443
Tumor
0.3
135
Tumor
0.3
1015
Tumor
0.3
967
Tumor
0.3
663
Tumor
0.3
461
Tumor
0.3
445
Tumor
0.3
355
Tumor
0.3
963
Tumor
0.3
515
Tumor
0.2
975
Tumor
0.2
367
Tumor
0.2
271
Tumor
0.2
411
Tumor
0.2
145
Tumor
0.2
227
Tumor
0.2
257
Tumor
0.2
983
Tumor
0.2
877
Tumor
0.2
171
Tumor
0.2
477
Tumor
0.2
161
Tumor
0.2
213
Tumor
0.2
648
Normal
0.2
697
Tumor
0.2
483
Tumor
0.2
635
Tumor
0.2
125
Tumor
0.2
513
Tumor
0.2
742
Normal
0.2
721
Tumor
0.2
956
Normal
0.2
571
Tumor
0.2
433
Tumor
0.2
492
Normal
0.2
923
Tumor
0.2
525
Tumor
0.2
567
Tumor
0.2
261
Tumor
0.2
391
Tumor
0.2
132
Normal
0.2
113
Tumor
0.2
728
Normal
0.2
393
Tumor
0.2
231
Tumor
0.2
361
Tumor
0.1
137
Tumor
0.1
671
Tumor
0.1
755
Tumor
0.1
427
Tumor
0.1
857
Tumor
0.1
1028
Normal
0.1
212
Normal
0.1
136
Normal
0.1
722
Normal
0.1
332
Normal
0.1
365
Tumor
0.1
955
Tumor
0.1
146
Normal
0.1
191
Tumor
0.1
518
Normal
0.1
221
Tumor
0.1
864
Normal
0.1
1026
Normal
0.1
112
Tumor
0.1
966
Normal
0.1
1021
Tumor
0.1
123
Tumor
0.1
425
Tumor
0.1
327
Tumor
0.1
943
Tumor
0.1
523
Tumor
0.1
921
Tumor
0.1
873
Tumor
0.1
185
Tumor
0.1
383
Tumor
0.1
813
Tumor
0.1
664
Normal
0.1
127
Tumor
0.1
138
Normal
0.1
666
Normal
0.1
616
Normal
0.1
925
Tumor
0.1
741
Tumor
0.1
723
Tumor
0.1
647
Tumor
0.1
737
Tumor
0.1
642
Normal
0.1
878
Normal
0.1
867
Tumor
0.1
738
Normal
0.1
286
Normal
0.1
298
Normal
0.1
852
Normal
0.1
913
Tumor
0.0
573
Tumor
0.0
976
Normal
0.0
716
Normal
0.0
314
Normal
0.0
474
Normal
0.0
416
Normal
0.0
114
Normal
0.0
628
Normal
0.0
455
Tumor
0.0
815
Tumor
0.0
746
Normal
0.0
124
Normal
0.0
484
Normal
0.0
756
Normal
0.0
851
Tumor
0.0
142
Normal
0.0
881
Tumor
0.0
331
Tumor
0.0
498
Normal
0.0
128
Normal
0.0
1022
Normal
0.0
297
Tumor
0.0
312
Normal
0.0
686
Normal
0.0
617
Tumor
0.0
426
Normal
0.0
472
Normal
0.0
278
Normal
0.0
662
Normal
0.0
744
Normal
0.0
351
Tumor
0.0
368
Normal
0.0
451
Tumor
0.0
272
Normal
0.0
415
Tumor
0.0
223
Tumor
0.0
311
Tumor
0.0
1043
Tumor
0.0
224
Normal
0.0
696
Normal
0.0
388
Normal
0.0
695
Tumor
0.0
434
Normal
0.0
422
Normal
0.0
463
Tumor
0.0
672
Normal
0.0
465
Tumor
0.0
814
Normal
0.0
196
Normal
0.0
533
Tumor
0.0
356
Normal
0.0
412
Normal
0.0
527
Tumor
0.0
431
Tumor
0.0
466
Normal
0.0
618
Normal
0.0
914
Normal
-0.1
944
Normal
-0.1
615
Tumor
-0.1
228
Normal
-0.1
824
Normal
-0.1
924
Normal
-0.1
786
Normal
-0.1
188
Normal
-0.1
187
Tumor
-0.1
524
Normal
-0.1
452
Normal
-0.1
818
Normal
-0.1
344
Normal
-0.1
462
Normal
-0.1
423
Tumor
-0.1
816
Normal
-0.1
937
Tumor
-0.1
968
Normal
-0.1
494
Normal
-0.1
866
Normal
-0.1
964
Normal
-0.1
714
Normal
-0.1
874
Normal
-0.1
636
Normal
-0.1
537
Tumor
-0.1
394
Normal
-0.1
481
Tumor
-0.1
396
Normal
-0.1
727
Tumor
-0.1
572
Normal
-0.1
342
Normal
-0.1
376
Normal
-0.1
448
Normal
-0.1
488
Normal
-0.1
435
Tumor
-0.1
366
Normal
-0.1
428
Normal
-0.1
424
Normal
-0.1
478
Normal
-0.1
938
Normal
-0.1
362
Normal
-0.1
267
Tumor
-0.1
111
Normal
-0.1
413
Tumor
-0.1
172
Normal
-0.1
126
Normal
-0.1
386
Normal
-0.1
218
Normal
-0.1
217
Tumor
-0.1
526
Normal
-0.1
954
Normal
-0.1
414
Normal
-0.1
883
Tumor
-0.1
258
Normal
-0.1
568
Normal
-0.1
467
Tumor
-0.1
698
Normal
-0.1
538
Normal
-0.1
392
Normal
-0.1
546
Normal
-0.1
778
Normal
-0.1
222
Normal
-0.1
328
Normal
-0.1
918
Normal
-0.1
284
Normal
-0.1
1032
Normal
-0.1
162
Normal
-0.2
558
Normal
-0.2
862
Normal
-0.2
545
Tumor
-0.2
214
Normal
-0.2
516
Normal
-0.2
186
Normal
-0.2
1042
Normal
-0.2
981
Tumor
-0.2
482
Normal
-0.2
262
Normal
-0.2
574
Normal
-0.2
958
Normal
-0.2
268
Normal
-0.2
858
Normal
-0.2
952
Normal
-0.2
456
Normal
-0.2
468
Normal
-0.2
554
Normal
-0.2
446
Normal
-0.2
915
Tumor
-0.2
916
Normal
-0.2
922
Normal
-0.2
436
Normal
-0.2
363
Tumor
-0.3
148
Normal
-0.3
232
Normal
-0.3
563
Tumor
-0.3
535
Tumor
-0.3
464
Normal
-0.3
514
Normal
-0.3
882
Normal
-0.3
384
Normal
-0.3
421
Tumor
-0.3
447
Tumor
-0.3
358
Normal
-0.3
536
Normal
-0.3
364
Normal
-0.3
926
Normal
-0.3
564
Normal
-0.3
353
Tumor
-0.3
1045
Tumor
-0.3
982
Normal
-0.3
432
Normal
-0.3
868
Normal
-0.3
1016
Normal
-0.4
195
Tumor
-0.4
192
Normal
-0.4
1046
Normal
-0.4
352
Normal
-0.4
534
Normal
-0.4
354
Normal
-0.5
341
Tumor
-0.5
444
Normal
-0.5
1014
Normal
-0.5
884
Normal
-0.5
1044
Normal
-0.6
912
Normal
-0.6
984
Normal
-0.6
528
Normal
-0.6
978
Normal
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
