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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFB2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
280.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
916.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
735.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
733.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
719.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
694.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
641.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
580.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
580.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
538.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
518.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
514.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
512.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
511.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
498.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
495.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
483.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
481.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
479.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
478.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
476.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
474.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
466.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
466.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
461.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
450.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
447.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
446.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
446.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
437.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
437.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
436.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
436.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
435.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
434.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
433.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
433.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
431.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
431.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
430.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
429.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
425.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
424.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
423.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
419.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
418.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
411.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
409.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
409.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
409.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
407.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
406.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
404.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
399.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
398.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
395.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
390.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
388.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
385.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
383.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
382.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
381.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
376.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
369.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
368.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
367.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
364.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
358.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
357.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
356.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
353.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
353.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
352.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
351.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
351.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
350.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
349.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
347.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
346.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
345.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
345.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
341.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
340.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
338.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
337.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
336.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
335.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
334.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
332.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
332.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
331.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
331.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
331.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
330.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
328.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
328.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
327.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
327.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
327.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
324.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
324.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
324.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
324.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
323.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
323.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
323.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
319.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
317.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
315.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
314.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
313.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
313.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
309.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
308.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
308.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
308.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
307.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
307.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
304.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
303.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
302.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
302.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
299.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
299.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
299.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
297.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
297.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
297.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
297.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
296.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
294.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
294.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
294.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
293.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
292.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
291.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
289.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
289.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
287.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
287.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
287.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
284.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
284.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
283.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
282.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
281.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
281.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
280.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
280.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
278.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
277.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
276.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
276.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
274.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
273.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
270.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
269.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
268.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
267.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
267.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
267.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
267.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
266.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
264.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
264.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
264.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
263.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
263.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
262.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
262.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
261.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
261.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
260.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
260.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
259.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
257.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
257.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
256.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
256.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
254.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
252.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
252.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
252.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
251.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
250.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
250.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
248.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
248.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
247.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
246.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
246.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
246.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
246.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
245.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
244.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
244.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
244.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
243.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
243.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
243.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
242.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
242.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
241.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
240.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
239.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
239.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
239.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
238.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
238.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
237.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
237.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
237.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
237.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
236.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
236.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
236.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
235.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
234.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
233.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
233.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
232.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
232.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
232.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
232.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
230.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
230.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
230.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
229.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
229.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
228.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
227.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
225.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
225.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
225.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
225.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
224.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
224.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
223.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
222.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
222.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
221.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
221.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
221.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
220.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
220.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
220.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
219.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
217.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
217.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
217.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
217.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
217.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
217.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
216.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
215.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
214.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
212.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
212.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
211.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
211.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
211.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
210.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
209.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
209.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
208.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
207.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
206.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
205.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
205.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
205.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
205.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
203.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
203.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
203.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
203.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
203.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
202.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
202.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
200.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
200.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
200.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
200.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
200.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
199.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
199.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
198.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
198.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
197.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
195.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
194.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
193.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
192.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
191.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
191.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
191.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
191.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
190.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
190.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
190.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
189.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
187.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
187.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
186.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
186.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
185.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
184.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
184.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
184.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
184.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
184.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
183.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
183.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
182.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
180.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
179.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
178.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
177.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
177.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
175.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
171.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
171.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
170.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
169.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
168.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
168.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
167.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
166.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
165.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
163.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
162.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
161.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
161.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
158.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
158.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
157.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
156.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
156.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
154.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
153.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
152.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
152.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
151.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
149.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
148.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
146.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
145.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
144.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
143.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
140.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
137.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
137.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
133.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
133.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
130.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
122.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
121.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
119.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
118.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
116.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
109.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
106.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
89.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFB2 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
147.0
Number of samples
231
Samples
Sample
Description
TPM
DO48741
0 years, male, NA, stage:3, alive, 240 days
644.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
617.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
560.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
539.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
423.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
405.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
384.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
371.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
349.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
306.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
303.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
300.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
293.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
266.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
266.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
252.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
251.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
250.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
249.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
246.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
235.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
233.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
225.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
223.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
222.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
221.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
213.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
211.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
210.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
208.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
204.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
200.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
200.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
190.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
189.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
188.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
185.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
182.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
181.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
181.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
180.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
177.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
176.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
176.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
175.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
174.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
173.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
173.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
173.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
172.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
172.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
171.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
169.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
168.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
167.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
167.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
166.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
164.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
164.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
163.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
163.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
163.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
162.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
162.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
161.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
161.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
159.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
156.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
156.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
154.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
153.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
153.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
152.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
152.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
152.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
150.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
149.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
149.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
148.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
147.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
147.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
147.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
146.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
145.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
145.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
144.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
144.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
144.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
143.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
142.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
141.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
141.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
141.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
139.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
139.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
139.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
139.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
138.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
138.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
138.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
137.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
137.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
135.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
135.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
134.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
134.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
132.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
132.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
131.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
130.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
130.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
130.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
129.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
128.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
128.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
127.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
127.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
127.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
127.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
125.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
125.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
125.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
124.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
124.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
124.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
123.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
123.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
123.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
123.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
122.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
122.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
121.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
121.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
120.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
119.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
119.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
118.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
116.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
115.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
115.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
115.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
114.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
114.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
113.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
112.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
111.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
111.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
111.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
110.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
110.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
109.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
108.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
107.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
107.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
106.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
106.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
105.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
105.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
104.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
103.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
103.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
102.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
102.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
102.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
101.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
101.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
101.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
100.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
99.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
99.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
98.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
98.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
98.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
97.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
97.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
96.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
96.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
95.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
94.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
94.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
94.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
93.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
93.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
93.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
92.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
92.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
92.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
91.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
90.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
90.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
89.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
89.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
88.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
88.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
86.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
86.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
86.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
85.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
85.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
85.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
83.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
83.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
83.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
83.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
79.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
79.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
79.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
79.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
79.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
78.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
77.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
77.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
75.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
75.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
75.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
74.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
73.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
73.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
72.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
72.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
71.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
67.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
63.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
57.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
56.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
56.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
56.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
55.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
50.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
44.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
43.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1031
Tumor
1.3
958
Normal
1.2
473
Tumor
1.2
968
Normal
1.0
1041
Tumor
0.9
664
Normal
0.9
162
Normal
0.9
944
Normal
0.9
388
Normal
0.9
648
Normal
0.8
722
Normal
0.8
975
Tumor
0.8
482
Normal
0.8
516
Normal
0.8
148
Normal
0.8
466
Normal
0.8
172
Normal
0.8
728
Normal
0.8
878
Normal
0.8
666
Normal
0.7
212
Normal
0.7
286
Normal
0.7
981
Tumor
0.7
713
Tumor
0.7
396
Normal
0.7
518
Normal
0.7
278
Normal
0.7
472
Normal
0.7
1025
Tumor
0.7
628
Normal
0.7
866
Normal
0.6
462
Normal
0.6
514
Normal
0.6
394
Normal
0.6
864
Normal
0.6
456
Normal
0.6
642
Normal
0.6
526
Normal
0.6
358
Normal
0.6
1022
Normal
0.6
616
Normal
0.6
564
Normal
0.6
132
Normal
0.6
314
Normal
0.6
494
Normal
0.6
716
Normal
0.6
636
Normal
0.6
662
Normal
0.6
188
Normal
0.6
696
Normal
0.6
1021
Tumor
0.6
954
Normal
0.6
478
Normal
0.5
756
Normal
0.5
742
Normal
0.5
446
Normal
0.5
912
Normal
0.5
481
Tumor
0.5
432
Normal
0.5
738
Normal
0.5
1032
Normal
0.5
915
Tumor
0.5
617
Tumor
0.5
474
Normal
0.5
861
Tumor
0.5
128
Normal
0.5
171
Tumor
0.5
342
Normal
0.5
723
Tumor
0.5
984
Normal
0.5
426
Normal
0.5
228
Normal
0.5
414
Normal
0.5
1014
Normal
0.5
484
Normal
0.5
284
Normal
0.5
464
Normal
0.5
572
Normal
0.5
355
Tumor
0.4
714
Normal
0.4
424
Normal
0.4
451
Tumor
0.4
138
Normal
0.4
312
Normal
0.4
686
Normal
0.4
963
Tumor
0.4
436
Normal
0.4
618
Normal
0.4
366
Normal
0.4
224
Normal
0.4
524
Normal
0.4
938
Normal
0.4
528
Normal
0.4
1028
Normal
0.4
136
Normal
0.4
491
Tumor
0.4
956
Normal
0.4
386
Normal
0.4
672
Normal
0.4
913
Tumor
0.4
344
Normal
0.4
868
Normal
0.4
327
Tumor
0.4
778
Normal
0.4
571
Tumor
0.4
546
Normal
0.4
376
Normal
0.4
492
Normal
0.4
392
Normal
0.3
452
Normal
0.3
786
Normal
0.3
568
Normal
0.3
952
Normal
0.3
328
Normal
0.3
977
Tumor
0.3
823
Tumor
0.3
146
Normal
0.3
558
Normal
0.3
858
Normal
0.3
112
Tumor
0.3
982
Normal
0.3
955
Tumor
0.3
824
Normal
0.3
911
Tumor
0.3
232
Normal
0.3
918
Normal
0.3
422
Normal
0.3
882
Normal
0.3
114
Normal
0.3
926
Normal
0.3
145
Tumor
0.3
298
Normal
0.3
267
Tumor
0.3
444
Normal
0.3
1042
Normal
0.3
356
Normal
0.3
914
Normal
0.3
111
Normal
0.3
557
Tumor
0.3
554
Normal
0.3
1016
Normal
0.3
412
Normal
0.3
874
Normal
0.3
493
Tumor
0.3
746
Normal
0.3
966
Normal
0.2
434
Normal
0.2
364
Normal
0.2
352
Normal
0.2
362
Normal
0.2
538
Normal
0.2
1026
Normal
0.2
488
Normal
0.2
142
Normal
0.2
615
Tumor
0.2
272
Normal
0.2
978
Normal
0.2
647
Tumor
0.2
924
Normal
0.2
258
Normal
0.2
415
Tumor
0.2
262
Normal
0.2
368
Normal
0.2
483
Tumor
0.2
867
Tumor
0.2
393
Tumor
0.2
715
Tumor
0.2
721
Tumor
0.2
341
Tumor
0.1
124
Normal
0.1
354
Normal
0.1
695
Tumor
0.1
384
Normal
0.1
468
Normal
0.1
818
Normal
0.1
223
Tumor
0.1
231
Tumor
0.1
416
Normal
0.1
881
Tumor
0.1
127
Tumor
0.1
852
Normal
0.1
857
Tumor
0.1
113
Tumor
0.1
395
Tumor
0.1
126
Normal
0.1
816
Normal
0.1
873
Tumor
0.1
361
Tumor
0.1
477
Tumor
0.1
423
Tumor
0.1
533
Tumor
0.1
257
Tumor
0.1
498
Normal
0.1
217
Tumor
0.1
435
Tumor
0.0
428
Normal
0.0
218
Normal
0.0
744
Normal
0.0
525
Tumor
0.0
135
Tumor
0.0
862
Normal
0.0
471
Tumor
0.0
922
Normal
0.0
884
Normal
0.0
964
Normal
0.0
534
Normal
0.0
574
Normal
0.0
527
Tumor
0.0
755
Tumor
0.0
196
Normal
0.0
445
Tumor
0.0
161
Tumor
0.0
627
Tumor
0.0
1015
Tumor
-0.1
268
Normal
-0.1
663
Tumor
-0.1
214
Normal
-0.1
487
Tumor
-0.1
186
Normal
-0.1
332
Normal
-0.1
943
Tumor
-0.1
976
Normal
-0.1
191
Tumor
-0.1
863
Tumor
-0.1
431
Tumor
-0.1
641
Tumor
-0.1
261
Tumor
-0.1
573
Tumor
-0.1
567
Tumor
-0.1
467
Tumor
-0.1
1027
Tumor
-0.2
635
Tumor
-0.2
357
Tumor
-0.2
545
Tumor
-0.2
211
Tumor
-0.2
497
Tumor
-0.2
367
Tumor
-0.2
851
Tumor
-0.2
523
Tumor
-0.2
413
Tumor
-0.2
375
Tumor
-0.2
222
Normal
-0.2
383
Tumor
-0.2
743
Tumor
-0.2
814
Normal
-0.2
131
Tumor
-0.2
883
Tumor
-0.2
877
Tumor
-0.2
461
Tumor
-0.3
195
Tumor
-0.3
923
Tumor
-0.3
313
Tumor
-0.3
443
Tumor
-0.3
465
Tumor
-0.3
517
Tumor
-0.3
387
Tumor
-0.3
141
Tumor
-0.3
353
Tumor
-0.3
192
Normal
-0.3
813
Tumor
-0.3
427
Tumor
-0.3
433
Tumor
-0.3
724
Normal
-0.3
277
Tumor
-0.4
365
Tumor
-0.4
227
Tumor
-0.4
213
Tumor
-0.4
865
Tumor
-0.4
553
Tumor
-0.4
385
Tumor
-0.4
741
Tumor
-0.4
463
Tumor
-0.4
185
Tumor
-0.4
311
Tumor
-0.4
785
Tumor
-0.4
363
Tumor
-0.4
917
Tumor
-0.4
187
Tumor
-0.5
285
Tumor
-0.5
391
Tumor
-0.5
123
Tumor
-0.5
563
Tumor
-0.5
297
Tumor
-0.5
221
Tumor
-0.5
137
Tumor
-0.5
515
Tumor
-0.5
271
Tumor
-0.5
283
Tumor
-0.6
331
Tumor
-0.6
537
Tumor
-0.6
125
Tumor
-0.6
965
Tumor
-0.6
421
Tumor
-0.6
937
Tumor
-0.6
817
Tumor
-0.6
351
Tumor
-0.6
951
Tumor
-0.7
815
Tumor
-0.7
953
Tumor
-0.7
425
Tumor
-0.7
727
Tumor
-0.7
983
Tumor
-0.8
661
Tumor
-0.8
147
Tumor
-0.8
916
Normal
-0.8
665
Tumor
-0.8
343
Tumor
-0.9
737
Tumor
-0.9
671
Tumor
-1.0
925
Tumor
-1.0
411
Tumor
-1.1
513
Tumor
-1.1
745
Tumor
-1.1
777
Tumor
-1.2
957
Tumor
-1.2
685
Tumor
-1.3
921
Tumor
-1.3
455
Tumor
-1.4
1013
Tumor
-1.4
967
Tumor
-1.7
1044
Normal
N/A
1043
Tumor
N/A
1046
Normal
N/A
1045
Tumor
N/A
535
Tumor
N/A
536
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.