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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
112.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
80.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
72.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
67.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
65.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
59.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
57.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
52.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
52.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
52.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
50.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
48.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
47.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
46.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
46.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
44.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
43.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
43.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
43.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
42.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
38.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
38.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
38.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
37.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
36.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
35.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
35.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
35.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
34.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
32.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
31.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
29.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
26.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
23.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
23.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
1.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
143.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
126.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
114.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
113.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
110.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
109.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
108.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
104.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
104.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
100.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
99.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
99.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
97.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
97.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
97.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
96.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
96.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
96.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
95.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
94.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
94.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
92.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
91.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
91.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
90.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
89.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
88.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
88.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
88.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
87.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
87.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
85.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
85.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
85.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
84.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
84.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
84.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
83.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
82.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
82.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
81.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
81.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
81.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
80.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
80.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
79.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
79.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
78.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
77.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
77.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
77.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
76.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
76.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
76.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
76.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
76.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
76.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
76.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
75.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
74.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
74.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
74.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
74.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
73.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
73.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
72.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
72.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
72.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
72.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
72.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
72.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
71.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
71.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
71.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
71.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
70.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
70.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
70.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
70.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
70.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
70.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
70.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
70.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
70.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
69.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
69.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
69.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
69.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
69.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
69.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
69.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
68.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
68.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
68.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
68.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
67.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
67.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
67.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
67.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
67.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
67.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
66.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
66.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
66.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
66.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
65.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
65.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
65.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
65.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
65.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
65.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
65.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
65.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
64.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
64.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
64.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
64.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
64.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
64.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
63.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
63.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
63.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
63.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
63.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
63.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
63.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
63.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
63.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
62.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
62.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
62.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
62.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
62.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
62.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
62.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
62.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
62.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
62.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
62.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
61.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
61.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
61.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
61.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
61.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
61.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
61.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
60.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
60.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
60.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
60.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
60.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
60.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
60.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
60.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
60.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
59.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
59.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
59.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
59.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
59.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
59.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
59.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
59.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
59.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
58.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
58.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
58.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
58.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
58.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
58.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
58.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
58.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
58.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
58.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
58.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
57.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
57.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
57.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
57.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
57.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
57.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
57.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
57.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
57.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
57.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
57.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
57.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
56.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
56.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
56.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
56.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
56.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
56.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
56.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
56.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
55.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
55.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
55.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
55.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
55.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
55.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
55.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
55.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
55.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
54.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
54.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
54.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
54.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
54.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
54.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
54.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
54.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
53.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
53.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
53.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
53.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
53.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
53.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
53.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
53.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
52.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
52.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
52.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
52.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
52.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
52.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
52.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
52.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
51.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
51.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
51.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
51.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
51.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
51.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
51.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
51.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
50.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
50.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
50.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
50.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
50.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
50.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
50.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
49.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
49.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
49.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
49.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
49.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
49.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
49.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
49.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
48.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
48.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
48.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
48.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
48.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
48.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
47.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
47.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
47.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
47.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
47.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
47.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
47.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
47.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
47.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
47.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
47.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
47.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
47.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
46.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
46.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
46.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
46.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
46.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
46.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
46.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
46.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
46.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
46.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
46.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
45.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
45.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
45.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
45.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
45.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
45.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
44.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
44.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
44.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
44.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
44.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
44.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
44.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
44.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
43.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
43.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
43.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
43.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
42.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
42.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
42.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
42.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
42.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
41.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
41.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
41.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
41.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
41.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
41.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
40.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
40.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
40.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
40.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
40.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
40.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
39.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
39.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
39.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
39.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
39.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
38.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
38.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
38.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
38.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
38.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
37.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
37.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
36.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
36.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
36.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
36.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
36.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
36.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
36.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
36.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
35.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
35.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
35.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
35.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
35.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
35.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
34.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
34.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
34.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
34.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
34.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
34.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
33.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
33.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
33.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
33.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
33.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
32.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
32.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
32.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
32.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
32.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
32.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
31.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
31.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
30.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
30.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
29.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
27.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
27.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
26.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
26.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
25.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
25.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
25.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
25.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
25.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
24.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
24.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
20.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
19.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
130.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
117.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
112.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
112.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
106.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
104.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
104.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
103.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
102.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
101.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
101.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
99.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
99.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
96.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
96.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
95.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
94.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
94.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
93.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
90.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
88.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
87.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
87.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
87.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
85.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
84.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
83.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
83.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
82.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
78.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
78.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
77.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
77.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
76.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
76.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
75.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
75.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
74.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
74.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
74.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
73.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
72.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
70.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
70.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
68.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
66.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
66.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
66.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
65.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
65.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
65.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
65.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
64.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
64.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
64.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
61.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
60.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
60.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
60.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
60.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
60.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
59.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
59.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
59.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
58.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
57.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
56.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
55.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
54.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
53.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
53.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
52.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
52.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
51.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
47.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
45.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
45.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
39.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
38.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
37.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
33.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
33.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
28.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
288.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
278.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
208.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
198.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
173.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
158.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
153.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
130.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
129.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
127.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
126.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
120.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
119.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
117.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
111.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
109.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
109.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
108.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
106.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
104.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
104.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
104.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
103.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
103.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
103.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
102.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
100.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
99.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
98.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
98.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
98.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
96.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
96.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
96.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
95.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
93.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
93.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
92.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
92.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
91.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
90.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
90.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
89.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
88.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
88.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
87.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
87.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
86.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
86.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
85.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
85.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
85.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
84.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
84.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
84.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
84.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
84.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
83.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
83.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
83.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
83.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
82.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
82.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
82.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
81.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
81.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
81.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
80.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
80.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
80.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
79.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
79.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
79.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
78.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
78.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
77.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
77.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
77.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
77.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
76.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
76.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
76.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
76.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
75.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
75.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
75.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
75.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
74.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
74.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
74.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
74.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
74.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
74.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
73.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
73.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
72.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
71.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
70.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
70.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
70.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
70.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
70.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
70.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
70.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
69.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
69.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
69.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
68.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
68.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
68.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
67.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
67.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
67.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
67.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
67.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
67.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
67.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
66.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
65.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
64.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
64.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
64.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
64.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
63.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
63.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
62.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
62.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
62.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
62.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
61.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
61.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
61.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
61.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
61.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
60.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
60.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
59.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
59.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
59.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
59.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
58.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
58.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
58.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
58.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
58.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
57.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
57.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
57.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
56.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
56.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
56.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
56.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
56.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
55.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
55.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
55.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
55.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
54.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
54.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
54.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
54.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
54.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
54.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
54.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
54.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
53.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
53.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
52.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
52.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
52.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
52.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
51.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
51.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
50.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
50.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
50.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
50.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
49.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
49.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
49.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
49.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
49.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
49.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
49.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
48.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
48.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
48.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
48.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
48.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
48.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
47.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
47.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
47.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
47.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
47.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
45.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
45.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
45.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
45.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
44.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
43.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
43.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
42.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
42.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
42.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
41.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
41.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
41.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
41.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
40.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
40.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
40.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
38.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
38.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
38.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
37.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
37.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
37.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
36.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
35.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
35.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
32.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
31.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
29.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
28.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
27.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
27.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
27.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
27.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
27.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
26.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
23.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
21.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
