HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:19.3 nTPM
HPA Brain:27.6 nTPM
GTEx:19.3 nTPM
FANTOM5:10.7 Scaled Tags Per Million
Pig:52.4 nTPM
Mouse:26.7 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010860Antibody CAB018747
Glial cells LowMedium
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
1898 Male, age 80, left hemisphere 30.9
2529 Female, age 94, left hemisphere 29.5
1911 Female, age 85, right hemisphere 28.3
1855 Male, age 76, left hemisphere 27.8
2621 Female, age 67, right hemisphere 24.1
2148 Female, age 91, left hemisphere 19.8
Dentate gyrus
nTPM: 27.6
2246 Female, age 85, both hemispheres 30.0
2010 Male, age 76, both hemispheres 29.1
2528 Male, age 74, both hemispheres 29.0
1927 Female, age 91, both hemispheres 28.0
2530 Female, age 94, left hemisphere 27.5
2531 Female, age 67, both hemispheres 22.1
Entorhinal gyrus
nTPM: 23.9
1938 Female, age 85, left hemisphere 30.1
2117 Female, age 91, right hemisphere 28.1
1787 Male, age 76, left hemisphere 24.9
2764 Male, age 80, right hemisphere 22.7
2613 Female, age 94, left hemisphere 20.2
2686 Male, age 75, right hemisphere 17.2
Hippocampus, CA1
nTPM: 27.6
2749 Male, age 80, left hemisphere 32.7
1873 Female, age 85, both hemispheres 27.5
2527 Male, age 74, both hemispheres 27.3
2082 Female, age 91, right hemisphere 26.1
2045 Male, age 76, both hemispheres 24.5
Hippocampus, CA2
nTPM: 27.4
2249 Male, age 74, both hemispheres 33.8
1892 Male, age 76, both hemispheres 30.3
1940 Female, age 85, left hemisphere 27.3
2113 Female, age 91, right hemisphere 26.7
1963 Male, age 80, left hemisphere 25.2
2437 Female, age 94, left hemisphere 21.1
Hippocampus, CA3
nTPM: 26.3
2436 Male, age 74, both hemispheres 34.2
1891 Female, age 85, both hemispheres 29.5
2137 Male, age 80, left hemisphere 29.0
1867 Male, age 76, both hemispheres 26.5
2620 Female, age 94, left hemisphere 20.8
2861 Female, age 67, both hemispheres 17.6
Parahippocampal cortex
nTPM: 25.2
1933 Female, age 85, both hemispheres 28.1
2250 Female, age 67, right hemisphere 27.9
1850 Male, age 80, both hemispheres 27.0
2532 Female, age 72, left hemisphere 27.0
1990 Female, age 91, right hemisphere 26.0
2018 Male, age 76, both hemispheres 25.8
2245 Female, age 91, both hemispheres 24.4
2692 Male, age 74, both hemispheres 23.6
2693 Female, age 94, both hemispheres 23.6
2622 Female, age 67, right hemisphere 18.4
Perirhinal gyrus
nTPM: 26.0
2521 Female, age 94, right hemisphere 29.0
1847 Female, age 91, left hemisphere 27.2
1841 Female, age 85, right hemisphere 25.8
2848 Male, age 76, right hemisphere 24.4
1794 Male, age 80, right hemisphere 23.7
Subiculum
nTPM: 26.5
1901 Male, age 80, both hemispheres 29.9
1977 Female, age 85, both hemispheres 28.0
2042 Male, age 76, both hemispheres 27.3
2438 Female, age 94, left hemisphere 25.4
2729 Female, age 91, right hemisphere 24.7
2619 Male, age 74, both hemispheres 23.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 32.2
Min nTPM: 7.5
Std nTPM: 4.4
Median nTPM: 19.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 32.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 29.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 28.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 27.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 26.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 25.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.7
FF:10153-102I9 76 years, female 12.0
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 52.4
Pig sample Sample description nTPM
Subiculum
nTPM: 48.6
Samples: 4

Max nTPM: 52.6
Min nTPM: 44.3
Sample A Female 52.6
Sample B Female 44.3
Sample C Male 48.2
Sample D Male 49.2
Dorsal hippocampus
nTPM: 52.4
Samples: 4

Max nTPM: 68.7
Min nTPM: 40.0
Sample A Female 58.3
Sample B Female 42.7
Sample C Male 68.7
Sample D Male 40.0
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 44.4
Min nTPM: 37.0
Sample A Female 44.2
Sample B Female 40.0
Sample C Male 44.4
Sample D Male 37.0
Ventral hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 54.8
Min nTPM: 38.2
Sample A Female 54.8
Sample B Female 38.2
Sample C Male 52.9
Sample D Male 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 26.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 20.9
Sample A Male 21.2
Sample B Male 20.9
Sample C Female 25.4
Sample D Female 22.9
Hippocampal formation
nTPM: 26.8
Samples: 4

Max nTPM: 30.3
Min nTPM: 25.0
Sample A Male 26.5
Sample B Male 25.0
Sample C Female 30.3
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68745588 Antisense, RP_050210_02_C07, Mouse strain C57BL/6J (56 days, male) 2.6

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