HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:14.8 nTPM
HPA Brain:8.7 nTPM
GTEx:14.8 nTPM
FANTOM5:353.5 Scaled Tags Per Million
Pig:80.1 nTPM
Mouse:136.5 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002554
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 8.7
Sample id Sample description nTPM
Hippocampus
nTPM: 5.9
1898 Male, age 80, left hemisphere 7.4
2621 Female, age 67, right hemisphere 6.7
2148 Female, age 91, left hemisphere 6.2
1855 Male, age 76, left hemisphere 5.3
1911 Female, age 85, right hemisphere 4.9
2529 Female, age 94, left hemisphere 4.9
Dentate gyrus
nTPM: 7.3
1927 Female, age 91, both hemispheres 9.3
2531 Female, age 67, both hemispheres 8.5
2530 Female, age 94, left hemisphere 7.2
2010 Male, age 76, both hemispheres 6.7
2528 Male, age 74, both hemispheres 6.2
2246 Female, age 85, both hemispheres 6.0
Entorhinal gyrus
nTPM: 6.3
2613 Female, age 94, left hemisphere 7.1
2764 Male, age 80, right hemisphere 7.1
1938 Female, age 85, left hemisphere 6.7
2686 Male, age 75, right hemisphere 6.1
2117 Female, age 91, right hemisphere 5.4
1787 Male, age 76, left hemisphere 5.3
Hippocampus, CA1
nTPM: 7.3
1873 Female, age 85, both hemispheres 9.4
2749 Male, age 80, left hemisphere 8.4
2045 Male, age 76, both hemispheres 7.0
2082 Female, age 91, right hemisphere 6.5
2527 Male, age 74, both hemispheres 5.5
Hippocampus, CA2
nTPM: 5.8
2249 Male, age 74, both hemispheres 7.1
1892 Male, age 76, both hemispheres 6.7
2113 Female, age 91, right hemisphere 6.5
2437 Female, age 94, left hemisphere 6.1
1940 Female, age 85, left hemisphere 4.5
1963 Male, age 80, left hemisphere 4.2
Hippocampus, CA3
nTPM: 8.7
2620 Female, age 94, left hemisphere 14.4
2137 Male, age 80, left hemisphere 11.3
2861 Female, age 67, both hemispheres 9.1
1867 Male, age 76, both hemispheres 6.5
1891 Female, age 85, both hemispheres 5.8
2436 Male, age 74, both hemispheres 5.1
Parahippocampal cortex
nTPM: 6.1
1850 Male, age 80, both hemispheres 9.0
2622 Female, age 67, right hemisphere 7.2
2250 Female, age 67, right hemisphere 6.7
1990 Female, age 91, right hemisphere 5.9
2532 Female, age 72, left hemisphere 5.9
2018 Male, age 76, both hemispheres 5.7
2692 Male, age 74, both hemispheres 5.7
1933 Female, age 85, both hemispheres 5.4
2245 Female, age 91, both hemispheres 5.1
2693 Female, age 94, both hemispheres 4.6
Perirhinal gyrus
nTPM: 7.6
1847 Female, age 91, left hemisphere 8.7
2848 Male, age 76, right hemisphere 8.7
1841 Female, age 85, right hemisphere 7.9
1794 Male, age 80, right hemisphere 6.5
2521 Female, age 94, right hemisphere 6.4
Subiculum
nTPM: 6.1
2438 Female, age 94, left hemisphere 7.8
1977 Female, age 85, both hemispheres 6.6
2619 Male, age 74, both hemispheres 6.2
2729 Female, age 91, right hemisphere 6.2
2042 Male, age 76, both hemispheres 5.1
1901 Male, age 80, both hemispheres 4.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 197

Max nTPM: 38.8
Min nTPM: 1.1
Std nTPM: 7.5
Median nTPM: 13.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 38.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 33.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 33.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 32.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 32.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 31.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 30.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 29.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 29.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 29.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 353.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 353.5
FF:10169-103B7 60 years, female 482.9
FF:10153-102I9 76 years, female 224.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 80.1
Pig sample Sample description nTPM
Subiculum
nTPM: 71.3
Samples: 4

Max nTPM: 84.9
Min nTPM: 59.8
Sample A Female 84.9
Sample B Female 67.9
Sample C Male 72.7
Sample D Male 59.8
Dorsal hippocampus
nTPM: 80.1
Samples: 4

Max nTPM: 91.0
Min nTPM: 69.7
Sample A Female 91.0
Sample B Female 89.8
Sample C Male 69.8
Sample D Male 69.7
Entorhinal cortex
nTPM: 70.6
Samples: 4

Max nTPM: 74.2
Min nTPM: 65.9
Sample A Female 71.1
Sample B Female 74.2
Sample C Male 71.0
Sample D Male 65.9
Ventral hippocampus
nTPM: 77.5
Samples: 4

Max nTPM: 86.7
Min nTPM: 59.3
Sample A Female 79.8
Sample B Female 59.3
Sample C Male 86.7
Sample D Male 84.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 136.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.5
Samples: 4

Max nTPM: 133.7
Min nTPM: 124.9
Sample A Male 127.7
Sample B Male 124.9
Sample C Female 133.7
Sample D Female 131.7
Hippocampal formation
nTPM: 136.5
Samples: 4

Max nTPM: 141.6
Min nTPM: 126.9
Sample A Male 140.9
Sample B Male 136.4
Sample C Female 141.6
Sample D Female 126.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
69014542 Antisense, RP_050310_01_C10, Mouse strain C57BL/6J (56 days, male) 17.0

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