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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPLP0 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1662.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6881.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5869.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5136.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4992.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4918.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4905.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4719.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4431.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4400.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4290.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4177.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4071.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3993.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3883.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3699.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3659.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3495.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3469.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
3412.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3406.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3402.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3351.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3333.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3330.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3306.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3274.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3193.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3143.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3139.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3126.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
3120.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
3116.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
3099.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3060.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
3056.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3039.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3013.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2976.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2958.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2800.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2779.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2775.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
2761.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2728.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2704.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2692.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2623.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2617.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2572.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2556.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2537.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2515.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2511.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2486.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2474.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2466.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2421.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2404.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2392.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2381.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2376.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2366.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2361.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2326.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2323.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2311.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
2309.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2303.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2294.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2291.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2287.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2279.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2279.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2265.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2253.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2227.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2212.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2196.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2192.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2147.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2135.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2129.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2128.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2111.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2104.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2104.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2093.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2088.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2078.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2061.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2054.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2020.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2019.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2016.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2008.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1986.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1965.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1949.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1945.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1936.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1935.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1930.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1928.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1918.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1915.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1913.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1899.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1898.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1892.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1888.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1876.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1872.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1841.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1833.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1830.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1829.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1783.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1761.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1752.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1750.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1748.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1741.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1738.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1735.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1731.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1729.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1726.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1723.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1685.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1672.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1666.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1663.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1657.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1649.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1649.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1645.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1639.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1624.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1612.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1611.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1610.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1591.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1576.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1562.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1557.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1554.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1549.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1541.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1537.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1534.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1532.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1528.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1526.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1525.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1524.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1521.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1502.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1497.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1485.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1479.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1475.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1473.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1468.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1465.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1455.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1437.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1436.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1426.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1426.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1423.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1411.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1408.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1406.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1404.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1401.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1397.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1397.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1390.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1390.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1387.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1384.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1383.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1374.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1372.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1370.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1361.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1360.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1358.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1355.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1354.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1343.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1343.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1342.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1338.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1336.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1319.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1315.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1315.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1314.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1310.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1307.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1306.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1304.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1290.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1270.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1269.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1268.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1268.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1267.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1264.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1264.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1264.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1259.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1254.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1253.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1249.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1245.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1233.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1233.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1230.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1225.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1217.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1214.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1205.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1198.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1196.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1196.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1194.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1187.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1186.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1182.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1180.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1178.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1172.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1168.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1168.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1168.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1160.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1157.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1157.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1157.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1155.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1151.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1149.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1142.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1138.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1136.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1135.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1135.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1134.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1129.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1124.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1120.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1119.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1113.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1108.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1104.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1102.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1102.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1099.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1093.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1086.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1078.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1074.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1067.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1066.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1065.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1065.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1057.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1040.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1017.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1010.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
994.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
992.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
984.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
982.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
981.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
979.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
975.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
971.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
971.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
970.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
958.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
956.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
951.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
950.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
948.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
943.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
922.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
922.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
920.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
919.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
919.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
914.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
911.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
911.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
908.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
908.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
907.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
897.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
893.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
890.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
887.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
884.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
884.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
884.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
882.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
868.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
856.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
852.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
851.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
845.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
843.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
841.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
839.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
832.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
829.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
820.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
814.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
813.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
808.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
806.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
803.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
801.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
794.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
792.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
790.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
783.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
778.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
774.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
771.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
761.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
747.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
745.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
742.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
742.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
741.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
735.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
723.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
722.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
720.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
716.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
679.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
660.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
651.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
648.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
639.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
632.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
625.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
623.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
616.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
616.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
600.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
583.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
582.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
580.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
552.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
524.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
485.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
440.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
379.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPLP0 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1093.2
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
5701.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
3681.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3358.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
3048.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
3040.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
2926.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
2820.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
2640.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
2639.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
2534.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
2501.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
2314.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
2236.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2222.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
2102.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
2077.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
2059.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
2045.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
2033.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
1985.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1974.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
1921.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
1868.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
1852.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
1851.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
1837.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
1801.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
1718.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
1702.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
1699.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
1682.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
1668.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
1656.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1629.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
1622.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
1615.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
1608.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1583.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
1579.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1577.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1546.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1539.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1515.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
1506.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
1497.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
1494.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
1487.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
1484.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1483.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1474.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
1433.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
1428.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1427.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
1422.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1421.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
1416.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
1412.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
1395.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
1395.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1391.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1387.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
1373.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
1367.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
1350.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
1348.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
1347.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
1341.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
1312.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
1300.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
1291.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1284.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
1268.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
1264.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
1257.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1254.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1251.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
1235.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
1226.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
1221.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1220.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
1207.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1195.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1173.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1160.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
1149.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1146.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1143.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
1139.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
1137.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
1128.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
1108.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1107.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
1104.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
1068.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
1066.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1064.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
1062.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
1044.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
1043.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
1021.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
1019.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
1018.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
1017.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
1012.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
1006.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
991.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
990.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
983.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
977.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
973.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
966.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
960.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
960.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
955.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
949.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
932.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
930.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
929.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
927.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
920.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
909.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
904.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
901.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
896.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
892.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
885.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
881.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
876.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
874.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
871.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
860.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
848.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
846.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
841.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
836.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
831.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
809.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
802.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
800.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
797.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
794.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
776.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
776.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
772.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
764.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
764.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
764.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
764.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
756.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
748.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
747.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
745.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
742.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
737.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
727.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
725.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
719.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
714.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
711.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
707.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
702.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
701.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
701.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
681.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
671.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
670.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
664.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
639.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
636.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
632.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
630.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
630.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
625.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
622.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
619.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
615.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
609.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
609.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
599.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
592.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
589.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
588.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
585.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
583.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
579.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
559.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
559.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
554.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
548.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
546.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
543.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
540.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
530.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
520.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
513.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
507.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
497.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
495.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
489.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
484.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
483.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
475.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
470.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
463.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
460.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
457.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
454.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
448.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
441.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
431.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
424.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
422.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
403.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
400.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
396.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
392.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
360.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
359.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
355.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
337.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
330.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
318.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
304.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
304.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
299.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
284.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
284.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
271.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
258.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
244.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
199.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.5
567
Tumor
0.4
113
Tumor
0.3
223
Tumor
0.3
467
Tumor
0.3
395
Tumor
0.3
443
Tumor
0.3
685
Tumor
0.2
815
Tumor
0.2
393
Tumor
0.2
636
Normal
0.2
414
Normal
0.2
436
Normal
0.2
661
Tumor
0.2
432
Normal
0.2
358
Normal
0.2
851
Tumor
0.2
573
Tumor
0.2
433
Tumor
0.2
135
Tumor
0.2
353
Tumor
0.2
571
Tumor
0.2
367
Tumor
0.2
172
Normal
0.2
332
Normal
0.2
196
Normal
0.2
413
Tumor
0.2
394
Normal
0.2
446
Normal
0.2
376
Normal
0.2
314
Normal
0.2
422
Normal
0.2
162
Normal
0.2
392
Normal
0.2
466
Normal
0.1
327
Tumor
0.1
331
Tumor
0.1
385
Tumor
0.1
111
Normal
0.1
285
Tumor
0.1
721
Tumor
0.1
452
Normal
0.1
214
Normal
0.1
145
Tumor
0.1
278
Normal
0.1
186
Normal
0.1
428
Normal
0.1
352
Normal
0.1
464
Normal
0.1
434
Normal
0.1
187
Tumor
0.1
648
Normal
0.1
227
Tumor
0.1
232
Normal
0.1
267
Tumor
0.1
222
Normal
0.1
426
Normal
0.1
286
Normal
0.1
421
Tumor
0.1
743
Tumor
0.1
451
Tumor
0.1
424
Normal
0.1
147
Tumor
0.1
388
Normal
0.1
195
Tumor
0.1
387
Tumor
0.1
777
Tumor
0.1
128
Normal
0.1
746
Normal
0.1
258
Normal
0.1
664
Normal
0.1
342
Normal
0.1
468
Normal
0.1
444
Normal
0.1
568
Normal
0.1
351
Tumor
0.1
662
Normal
0.1
132
Normal
0.1
724
Normal
0.1
738
Normal
0.1
114
Normal
0.1
298
Normal
0.1
1027
Tumor
0.1
257
Tumor
0.1
124
Normal
0.1
368
Normal
0.1
344
Normal
0.1
218
Normal
0.1
362
Normal
0.1
745
Tumor
0.1
435
Tumor
0.1
136
Normal
0.1
713
Tumor
0.1
425
Tumor
0.1
778
Normal
0.1
445
Tumor
0.1
138
Normal
0.1
671
Tumor
0.1
955
Tumor
0.0
1021
Tumor
0.0
462
Normal
0.0
272
Normal
0.0
742
Normal
0.0
188
Normal
0.0
864
Normal
0.0
148
Normal
0.0
221
Tumor
0.0
191
Tumor
0.0
354
Normal
0.0
786
Normal
0.0
728
Normal
0.0
262
Normal
0.0
126
Normal
0.0
672
Normal
0.0
628
Normal
0.0
396
Normal
0.0
384
Normal
0.0
528
Normal
0.0
666
Normal
0.0
463
Tumor
0.0
983
Tumor
0.0
423
Tumor
0.0
228
Normal
0.0
862
Normal
0.0
696
Normal
0.0
366
Normal
0.0
723
Tumor
0.0
465
Tumor
0.0
564
Normal
0.0
213
Tumor
0.0
112
Tumor
0.0
558
Normal
0.0
481
Tumor
0.0
813
Tumor
0.0
824
Normal
0.0
137
Tumor
0.0
284
Normal
0.0
858
Normal
0.0
271
Tumor
0.0
217
Tumor
N/A
431
Tumor
0.0
618
Normal
0.0
171
Tumor
0.0
356
Normal
0.0
456
Normal
0.0
665
Tumor
0.0
386
Normal
0.0
617
Tumor
0.0
1026
Normal
0.0
572
Normal
0.0
686
Normal
0.0
865
Tumor
0.0
642
Normal
0.0
427
Tumor
0.0
978
Normal
0.0
715
Tumor
0.0
185
Tumor
0.0
912
Normal
0.0
212
Normal
0.0
574
Normal
0.0
268
Normal
0.0
375
Tumor
0.0
818
Normal
0.0
161
Tumor
0.0
312
Normal
0.0
937
Tumor
0.0
866
Normal
0.0
868
Normal
0.0
447
Tumor
0.0
277
Tumor
0.0
455
Tumor
0.0
663
Tumor
0.0
698
Normal
0.0
125
Tumor
0.0
142
Normal
0.0
343
Tumor
0.0
537
Tumor
0.0
1044
Normal
0.0
877
Tumor
-0.1
365
Tumor
-0.1
722
Normal
-0.1
938
Normal
-0.1
756
Normal
-0.1
755
Tumor
-0.1
448
Normal
-0.1
123
Tumor
-0.1
261
Tumor
-0.1
744
Normal
-0.1
391
Tumor
-0.1
816
Normal
-0.1
341
Tumor
-0.1
814
Normal
-0.1
1016
Normal
-0.1
127
Tumor
-0.1
361
Tumor
-0.1
412
Normal
-0.1
1022
Normal
-0.1
146
Normal
-0.1
1043
Tumor
-0.1
231
Tumor
-0.1
852
Normal
-0.1
926
Normal
-0.1
737
Tumor
-0.1
968
Normal
-0.1
956
Normal
-0.1
914
Normal
-0.1
563
Tumor
-0.1
714
Normal
-0.1
411
Tumor
-0.1
526
Normal
-0.1
224
Normal
-0.1
534
Normal
-0.1
514
Normal
-0.1
647
Tumor
-0.1
716
Normal
-0.1
944
Normal
-0.1
727
Tumor
-0.1
635
Tumor
-0.1
517
Tumor
-0.1
313
Tumor
-0.1
474
Normal
-0.1
488
Normal
-0.1
1028
Normal
-0.1
878
Normal
-0.1
984
Normal
-0.1
884
Normal
-0.1
952
Normal
-0.1
494
Normal
-0.1
357
Tumor
-0.1
131
Tumor
-0.1
1015
Tumor
-0.1
981
Tumor
-0.1
482
Normal
-0.1
966
Normal
-0.1
976
Normal
-0.1
922
Normal
-0.1
1014
Normal
-0.1
461
Tumor
-0.1
982
Normal
-0.1
192
Normal
-0.1
785
Tumor
-0.1
873
Tumor
-0.1
535
Tumor
-0.1
918
Normal
-0.1
964
Normal
-0.1
867
Tumor
-0.1
882
Normal
-0.1
913
Tumor
-0.1
881
Tumor
-0.1
416
Normal
-0.2
497
Tumor
-0.2
515
Tumor
-0.2
546
Normal
-0.2
817
Tumor
-0.2
328
Normal
-0.2
874
Normal
-0.2
472
Normal
-0.2
518
Normal
-0.2
527
Tumor
-0.2
141
Tumor
-0.2
1032
Normal
-0.2
923
Tumor
-0.2
297
Tumor
-0.2
967
Tumor
-0.2
695
Tumor
-0.2
924
Normal
-0.2
1042
Normal
-0.2
363
Tumor
-0.2
883
Tumor
-0.2
616
Normal
-0.2
965
Tumor
-0.2
861
Tumor
-0.2
953
Tumor
-0.2
615
Tumor
-0.2
916
Normal
-0.2
513
Tumor
-0.2
523
Tumor
-0.2
383
Tumor
-0.2
823
Tumor
-0.2
641
Tumor
-0.2
1046
Normal
-0.2
283
Tumor
-0.2
524
Normal
-0.2
516
Normal
-0.2
951
Tumor
-0.2
311
Tumor
-0.2
954
Normal
-0.2
975
Tumor
-0.3
943
Tumor
-0.3
925
Tumor
-0.3
364
Normal
-0.3
958
Normal
-0.3
536
Normal
-0.3
484
Normal
-0.3
554
Normal
-0.3
863
Tumor
-0.3
627
Tumor
-0.3
857
Tumor
-0.3
493
Tumor
-0.3
545
Tumor
-0.3
977
Tumor
-0.3
697
Tumor
-0.3
741
Tumor
-0.3
915
Tumor
-0.3
415
Tumor
-0.3
917
Tumor
-0.3
921
Tumor
-0.3
525
Tumor
-0.3
471
Tumor
-0.3
963
Tumor
-0.4
1045
Tumor
-0.4
1025
Tumor
-0.4
492
Normal
-0.4
911
Tumor
-0.4
478
Normal
-0.4
1041
Tumor
-0.4
487
Tumor
-0.4
211
Tumor
-0.4
483
Tumor
-0.4
477
Tumor
-0.4
538
Normal
-0.4
957
Tumor
-0.4
1031
Tumor
-0.4
498
Normal
-0.4
355
Tumor
-0.5
533
Tumor
-0.5
491
Tumor
-0.5
553
Tumor
-0.5
1013
Tumor
-0.6
473
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.