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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCN1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
43.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
42.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
37.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
29.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
28.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
25.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
25.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
24.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
23.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
17.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
17.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
15.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCN1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
35.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
35.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
30.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
30.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
27.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
27.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
25.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
25.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
22.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
22.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
20.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
20.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
20.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
19.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
19.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
18.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
18.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
17.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
17.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
9.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
26.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
22.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
20.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
15.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GCN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
54.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
51.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
43.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
41.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
41.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
38.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
34.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
34.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
33.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
31.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
30.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
29.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
29.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
29.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
28.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
28.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
27.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
26.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
25.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
22.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
22.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
21.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
20.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
20.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
20.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
20.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
19.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
19.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
19.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
16.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
14.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
13.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
6.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
1.0
CPT0001340003
Tumor
0.8
CPT0078800003
Tumor
0.6
CPT0023350003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0001180009
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0012550003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0088690003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0017450001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0088710001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0078990003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0084560003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0086030003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0066480003
Tumor
-0.4
CPT0017410003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
