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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TESC is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
74.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
61.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
22.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TESC is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
229.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
171.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
165.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
132.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
123.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
121.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
103.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
102.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
101.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
98.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
89.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
89.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
87.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
85.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
85.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
79.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
63.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
52.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
50.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
49.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
49.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
45.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
43.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
43.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
42.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
42.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
42.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
41.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
41.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
40.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
40.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
40.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
39.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
39.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
38.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
38.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
38.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
37.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
36.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
36.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
35.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
35.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
34.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
32.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
30.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
30.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
28.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
27.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
26.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
23.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
22.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
21.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
20.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
20.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
9.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
9.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
8.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
7.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
7.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
7.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
6.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
6.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
6.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
6.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
5.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
5.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
5.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
5.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
5.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
5.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
5.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
5.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
5.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
5.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
5.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
5.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
5.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
4.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
4.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
4.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
4.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
4.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
4.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
4.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
4.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
4.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
4.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
4.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
4.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
4.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
4.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
4.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
4.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
4.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
4.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
4.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
4.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
3.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
3.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
3.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
3.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
3.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
3.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
3.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
3.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
3.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
3.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
3.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
3.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
3.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
3.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
3.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
3.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
3.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
3.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
3.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
3.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
3.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
3.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
3.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
3.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
3.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
3.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
3.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
3.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
3.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
3.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
3.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
3.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
3.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
2.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
2.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
2.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
2.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
2.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
2.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
2.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
2.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
2.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
2.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
2.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
2.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
2.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
2.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
2.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
2.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
2.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
2.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
2.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
2.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
2.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
1.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
1.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
1.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
1.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
1.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
1.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
1.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
1.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
1.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
1.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
1.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
0.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TESC is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
116.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
79.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
77.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
68.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
48.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
45.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
37.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
33.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
26.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
26.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
12.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
10.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
9.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
8.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
7.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
7.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
7.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
7.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
7.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
6.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
6.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
5.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
5.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
5.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
5.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
5.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
5.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
4.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
4.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
3.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
3.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
3.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
3.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
3.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
3.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
3.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
2.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
2.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
2.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
2.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
1.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
1.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
1.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
1.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
0.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
0.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TESC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
667.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
576.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
451.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
437.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
387.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
359.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
347.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
293.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
280.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
272.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
265.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
263.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
240.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
239.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
236.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
229.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
221.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
211.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
206.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
190.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
188.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
188.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
187.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
178.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
167.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
166.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
161.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
155.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
154.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
138.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
138.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
136.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
134.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
133.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
132.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
131.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
127.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
126.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
124.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
121.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
119.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
117.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
117.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
115.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
113.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
112.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
111.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
108.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
106.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
105.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
105.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
104.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
104.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
104.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
104.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
103.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
102.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
100.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
100.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
99.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
99.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
97.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
97.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
95.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
94.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
93.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
93.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
92.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
90.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
89.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
88.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
88.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
87.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
87.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
86.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
85.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
85.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
81.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
80.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
79.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
79.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
78.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
78.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
77.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
77.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
76.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
76.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
76.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
76.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
73.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
72.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
72.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
71.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
71.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
70.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
69.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
68.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
68.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
68.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
67.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
66.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
66.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
66.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
65.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
64.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
62.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
62.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
61.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
60.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
59.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
59.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
58.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
58.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
58.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
58.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
57.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
57.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
56.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
55.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
53.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
53.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
51.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
51.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
51.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
51.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
51.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
51.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
51.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
50.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
50.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
49.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
49.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
48.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
48.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
47.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
47.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
46.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
43.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
43.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
41.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
41.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
40.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
40.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
39.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
38.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
38.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
38.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
37.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
34.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
34.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
34.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
33.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
33.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
32.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
31.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
30.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
30.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
30.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
28.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
28.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
23.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
22.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
14.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
12.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
8.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
8.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
7.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
5.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
4.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
2.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
2.0
CPT0092290003
Tumor
1.6
CPT0079410003
Tumor
1.6
CPT0065870003
Tumor
1.4
CPT0006630003
Tumor
1.3
CPT0065810003
Tumor
1.2
CPT0017850003
Tumor
1.2
CPT0069000003
Tumor
1.1
CPT0078930003
Tumor
1.0
CPT0069160003
Tumor
1.0
CPT0012370003
Tumor
0.9
CPT0078830003
Tumor
0.9
CPT0069190001
Normal
0.8
CPT0012640003
Normal
0.7
CPT0092790003
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0086870003
Tumor
0.6
CPT0063330001
Normal
0.6
CPT0079300001
Normal
0.6
CPT0092160003
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0011410003
Tumor
0.4
CPT0025920001
Normal
0.4
CPT0002370001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0088640003
Normal
0.4
CPT0009020003
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0020130001
Normal
0.3
CPT0092190003
Normal
0.3
CPT0025110003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0019160001
Normal
0.2
CPT0001510001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0011240003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0079000001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0018250001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0007470001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0014160003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0087050003
Normal
-0.4
CPT0010160003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0086370003
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0001270001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0088630003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0065750003
Tumor
-0.5
CPT0001350001
Normal
-0.5
CPT0079380003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0063640001
Normal
-0.5
CPT0086030003
Tumor
-0.5
CPT0078660003
Tumor
-0.6
CPT0023360001
Normal
-0.6
CPT0012670003
Tumor
-0.6
CPT0014470001
Normal
-0.6
CPT0019130003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0025290003
Tumor
-0.7
CPT0002350011
Tumor
-0.8
CPT0012900004
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0020120003
Tumor
-0.8
CPT0021240003
Tumor
-0.8
CPT0079180003
Tumor
-0.8
CPT0092740003
Normal
-0.8
CPT0078990003
Tumor
-0.9
CPT0085670003
Tumor
-0.9
CPT0088920001
Normal
-0.9
CPT0025230003
Tumor
-0.9
CPT0025880003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0086950003
Tumor
-1.1
CPT0014450004
Tumor
-1.1
CPT0001340003
Tumor
-1.2
CPT0002270011
Tumor
-1.2
CPT0024670003
Tumor
-1.2
CPT0088550004
Tumor
-1.2
CPT0086820003
Tumor
-1.3
CPT0007320003
Tumor
-1.3
CPT0023350003
Tumor
-1.4
CPT0001180009
Tumor
-1.5
CPT0000640003
Tumor
-1.6
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0010110003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0006950001
Normal
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0081600003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0025580004
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.