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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIP6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
167.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
136.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
135.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
127.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
126.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
126.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
122.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
122.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
118.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
117.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
115.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
111.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
109.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
106.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
101.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
100.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
99.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
98.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
97.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
96.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
93.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
91.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
89.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
88.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
87.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
85.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
85.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
84.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
84.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
84.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
84.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
84.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
84.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
83.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
82.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
81.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
79.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
78.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
78.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
77.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
76.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
75.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
75.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
74.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
73.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
73.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
73.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
72.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
71.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
70.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
69.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
69.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
68.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
68.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
67.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
67.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
66.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
66.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
65.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
64.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
63.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
63.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
63.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
62.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
62.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
62.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
62.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
61.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
61.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
60.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
60.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
60.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
60.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
60.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
59.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
59.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
59.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
59.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
59.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
58.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
58.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
58.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
58.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
58.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
58.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
58.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
58.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
58.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
57.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
57.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
57.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
56.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
55.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
55.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
54.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
54.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
54.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
54.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
53.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
53.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
53.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
53.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
53.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
52.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
52.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
52.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
52.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
51.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
51.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
51.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
51.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
51.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
51.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
51.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
51.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
50.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
50.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
50.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
50.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
50.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
49.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
49.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
49.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
49.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
49.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
49.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
48.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
48.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
48.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
48.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
48.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
48.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
47.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
47.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
47.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
47.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
47.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
46.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
46.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
46.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
46.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
46.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
45.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
45.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
45.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
45.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
45.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
45.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
45.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
45.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
45.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
45.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
44.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
44.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
44.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
44.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
44.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
43.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
43.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
43.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
43.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
43.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
43.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
43.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
43.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
42.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
42.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
42.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
42.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
42.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
42.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
42.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
42.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
42.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
41.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
41.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
41.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
41.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
41.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
41.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
41.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
41.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
40.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
40.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
39.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
39.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
39.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
39.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
38.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
38.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
38.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
37.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
37.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
37.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
37.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
37.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
37.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
36.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
36.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
36.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
36.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
36.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
35.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
35.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
35.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
34.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
34.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
34.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
34.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
34.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
34.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
34.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
34.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
34.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
34.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
33.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
33.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
33.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
33.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
33.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
32.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
32.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
32.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
32.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
32.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
32.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
32.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
31.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
31.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
31.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
31.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
30.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
30.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
30.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
30.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
30.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
29.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
29.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
29.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
29.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
29.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
29.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
28.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
28.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
28.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
28.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
28.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
28.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
27.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
27.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
27.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
27.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
27.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
27.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
27.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
27.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
27.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
26.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
26.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
26.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
26.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
26.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
26.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
26.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
26.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
24.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
24.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
24.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
24.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
24.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
24.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
23.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
23.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
23.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
23.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
23.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
23.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
23.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
22.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
22.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
22.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
21.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
21.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
21.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
21.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
21.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
21.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
20.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
20.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
20.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
20.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
20.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
20.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
20.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
19.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
19.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
18.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
18.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
18.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
17.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
17.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
17.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
16.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
16.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
15.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
15.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
14.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
13.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
13.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
11.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
11.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
11.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
11.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
6.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
6.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
6.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
3.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
2.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIP6 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.9
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
200.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
157.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
135.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
125.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
107.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
97.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
96.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
95.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
93.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
93.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
92.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
91.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
87.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
85.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
82.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
79.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
79.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
78.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
73.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
72.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
72.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
71.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
70.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
70.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
69.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
68.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
67.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
67.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
66.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
65.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
65.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
65.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
65.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
64.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
63.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
63.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
62.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
62.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
59.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
59.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
57.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
57.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
57.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
56.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
56.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
56.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
56.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
56.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
55.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
55.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
55.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
55.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
55.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
55.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
54.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
54.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
54.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
54.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
54.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
53.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
53.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
53.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
52.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
52.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
52.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
51.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
51.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
51.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
51.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
51.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
51.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
50.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
50.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
50.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
49.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
49.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
47.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
47.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
47.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
47.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
47.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
46.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
45.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
45.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
45.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
45.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
45.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
45.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
45.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
44.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
44.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
44.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
43.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
43.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
43.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
43.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
42.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
42.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
42.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
42.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
42.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
41.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
41.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
40.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
40.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
40.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
40.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
40.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
39.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
39.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
39.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
38.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
38.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
38.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
38.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
38.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
37.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
37.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
37.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
37.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
37.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
36.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
35.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
35.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
35.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
35.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
35.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
35.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
35.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
35.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
34.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
34.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
33.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
33.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
33.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
33.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
33.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
32.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
32.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
32.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
32.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
32.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
32.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
31.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
31.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
31.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
31.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
30.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
30.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
30.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
30.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
30.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
30.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
30.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
30.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
29.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
29.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
29.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
29.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
28.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
28.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
28.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
28.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
27.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
27.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
26.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
26.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
26.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
26.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
26.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
25.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
25.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
25.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
25.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
24.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
24.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
23.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
23.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
22.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
22.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
22.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
22.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
21.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
18.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
17.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
17.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
17.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
16.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
15.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
14.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
11.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
11.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
10.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
5.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
2.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.0
967
Tumor
0.9
951
Tumor
0.9
387
Tumor
0.8
131
Tumor
0.8
533
Tumor
0.7
445
Tumor
0.7
327
Tumor
0.7
737
Tumor
0.7
483
Tumor
0.7
755
Tumor
0.7
271
Tumor
0.7
1025
Tumor
0.6
455
Tumor
0.6
363
Tumor
0.6
635
Tumor
0.6
343
Tumor
0.6
137
Tumor
0.6
1021
Tumor
0.6
921
Tumor
0.6
393
Tumor
0.6
365
Tumor
0.5
523
Tumor
0.5
615
Tumor
0.5
357
Tumor
0.5
375
Tumor
0.5
124
Normal
0.5
515
Tumor
0.5
851
Tumor
0.5
425
Tumor
0.5
185
Tumor
0.4
452
Normal
0.4
745
Tumor
0.4
883
Tumor
0.4
257
Tumor
0.4
434
Normal
0.4
297
Tumor
0.4
146
Normal
0.4
135
Tumor
0.4
361
Tumor
0.4
283
Tumor
0.4
785
Tumor
0.4
952
Normal
0.4
1013
Tumor
0.4
223
Tumor
0.4
214
Normal
0.4
331
Tumor
0.4
113
Tumor
0.4
491
Tumor
0.3
777
Tumor
0.3
461
Tumor
0.3
963
Tumor
0.3
138
Normal
0.3
192
Normal
0.3
525
Tumor
0.3
538
Normal
0.3
188
Normal
0.3
746
Normal
0.3
817
Tumor
0.3
1031
Tumor
0.3
456
Normal
0.3
385
Tumor
0.3
477
Tumor
0.3
497
Tumor
0.3
881
Tumor
0.3
344
Normal
0.3
816
Normal
0.3
221
Tumor
0.3
421
Tumor
0.3
136
Normal
0.3
917
Tumor
0.3
132
Normal
0.3
823
Tumor
0.3
213
Tumor
0.3
386
Normal
0.3
313
Tumor
0.3
423
Tumor
0.3
498
Normal
0.3
874
Normal
0.3
554
Normal
0.3
852
Normal
0.3
567
Tumor
0.3
395
Tumor
0.2
924
Normal
0.2
977
Tumor
0.2
312
Normal
0.2
465
Tumor
0.2
672
Normal
0.2
268
Normal
0.2
744
Normal
0.2
545
Tumor
0.2
493
Tumor
0.2
492
Normal
0.2
553
Tumor
0.2
436
Normal
0.2
311
Tumor
0.2
162
Normal
0.2
224
Normal
0.2
923
Tumor
0.2
666
Normal
0.2
391
Tumor
0.2
392
Normal
0.2
913
Tumor
0.2
426
Normal
0.2
957
Tumor
0.2
642
Normal
0.2
982
Normal
0.2
466
Normal
0.2
1028
Normal
0.2
278
Normal
0.2
111
Normal
0.2
464
Normal
0.2
878
Normal
0.2
956
Normal
0.2
911
Tumor
0.2
187
Tumor
0.2
355
Tumor
0.2
478
Normal
0.2
537
Tumor
0.2
662
Normal
0.2
473
Tumor
0.2
664
Normal
0.2
863
Tumor
0.2
413
Tumor
0.2
114
Normal
0.2
126
Normal
0.2
222
Normal
0.1
955
Tumor
0.1
422
Normal
0.1
261
Tumor
0.1
564
Normal
0.1
444
Normal
0.1
572
Normal
0.1
943
Tumor
0.1
953
Tumor
0.1
925
Tumor
0.1
195
Tumor
0.1
558
Normal
0.1
298
Normal
0.1
535
Tumor
0.1
627
Tumor
0.1
424
Normal
0.1
411
Tumor
0.1
362
Normal
0.1
161
Tumor
0.1
527
Tumor
0.1
966
Normal
0.1
916
Normal
0.1
414
Normal
0.1
536
Normal
0.1
574
Normal
0.1
471
Tumor
0.1
472
Normal
0.1
983
Tumor
0.1
884
Normal
0.1
186
Normal
0.1
428
Normal
0.1
618
Normal
0.1
716
Normal
0.1
714
Normal
0.1
342
Normal
0.1
617
Tumor
0.1
912
Normal
0.1
412
Normal
0.1
354
Normal
0.1
262
Normal
0.1
468
Normal
0.1
671
Tumor
0.1
128
Normal
0.1
648
Normal
0.1
218
Normal
0.1
332
Normal
0.1
125
Tumor
0.1
1032
Normal
0.1
446
Normal
0.1
914
Normal
0.1
516
Normal
0.1
873
Tumor
0.1
416
Normal
0.1
978
Normal
0.1
1045
Tumor
0.1
882
Normal
0.1
147
Tumor
0.1
1022
Normal
0.1
448
Normal
0.1
563
Tumor
0.1
968
Normal
0.1
415
Tumor
0.1
984
Normal
0.1
314
Normal
0.1
145
Tumor
0.1
1044
Normal
0.1
857
Tumor
0.1
685
Tumor
0.1
494
Normal
0.1
474
Normal
0.0
217
Tumor
0.0
818
Normal
0.0
447
Tumor
0.0
394
Normal
0.0
277
Tumor
0.0
518
Normal
0.0
211
Tumor
0.0
285
Tumor
0.0
1026
Normal
0.0
172
Normal
0.0
868
Normal
0.0
351
Tumor
0.0
528
Normal
0.0
944
Normal
0.0
368
Normal
0.0
918
Normal
0.0
358
Normal
0.0
1041
Tumor
0.0
715
Tumor
0.0
858
Normal
0.0
228
Normal
0.0
272
Normal
0.0
366
Normal
0.0
513
Tumor
0.0
148
Normal
0.0
451
Tumor
0.0
142
Normal
0.0
396
Normal
0.0
824
Normal
0.0
568
Normal
0.0
433
Tumor
0.0
258
Normal
0.0
352
Normal
0.0
862
Normal
0.0
534
Normal
0.0
432
Normal
0.0
1014
Normal
0.0
695
Tumor
0.0
742
Normal
0.0
813
Tumor
0.0
573
Tumor
0.0
463
Tumor
0.0
728
Normal
0.0
364
Normal
0.0
713
Tumor
0.0
286
Normal
0.0
227
Tumor
0.0
741
Tumor
0.0
976
Normal
0.0
958
Normal
0.0
722
Normal
0.0
1027
Tumor
0.0
864
Normal
0.0
738
Normal
0.0
482
Normal
0.0
721
Tumor
0.0
376
Normal
0.0
328
Normal
0.0
427
Tumor
0.0
636
Normal
-0.1
975
Tumor
-0.1
212
Normal
-0.1
778
Normal
-0.1
435
Tumor
-0.1
1015
Tumor
-0.1
232
Normal
-0.1
141
Tumor
-0.1
353
Tumor
-0.1
1016
Normal
-0.1
284
Normal
-0.1
546
Normal
-0.1
628
Normal
-0.1
383
Tumor
-0.1
388
Normal
-0.1
488
Normal
-0.1
663
Tumor
-0.1
686
Normal
-0.1
696
Normal
-0.1
524
Normal
-0.1
723
Tumor
-0.1
462
Normal
-0.1
866
Normal
-0.1
698
Normal
-0.1
526
Normal
-0.1
356
Normal
-0.1
647
Tumor
-0.1
443
Tumor
-0.1
938
Normal
-0.1
481
Tumor
-0.1
964
Normal
-0.1
922
Normal
-0.1
484
Normal
-0.1
926
Normal
-0.1
867
Tumor
-0.1
196
Normal
-0.1
384
Normal
-0.1
514
Normal
-0.1
616
Normal
-0.2
661
Tumor
-0.2
665
Tumor
-0.2
954
Normal
-0.2
697
Tumor
-0.2
467
Tumor
-0.2
727
Tumor
-0.2
861
Tumor
-0.2
815
Tumor
-0.2
1042
Normal
-0.2
191
Tumor
-0.2
981
Tumor
-0.2
786
Normal
-0.2
1046
Normal
-0.2
267
Tumor
-0.2
341
Tumor
-0.2
756
Normal
-0.2
517
Tumor
-0.2
814
Normal
-0.2
431
Tumor
-0.3
557
Tumor
-0.3
865
Tumor
-0.3
641
Tumor
-0.3
367
Tumor
-0.3
877
Tumor
-0.3
1043
Tumor
-0.4
965
Tumor
-0.4
915
Tumor
-0.4
231
Tumor
-0.4
127
Tumor
-0.5
571
Tumor
-0.5
724
Normal
-0.6
112
Tumor
-0.6
171
Tumor
-0.8
487
Tumor
-0.9
937
Tumor
-1.1
123
Tumor
-1.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.