HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:8.7 nTPM
HPA Brain:23.7 nTPM
GTEx:8.7 nTPM
FANTOM5:42.1 Scaled Tags Per Million
Pig:34.1 nTPM
Mouse:29.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067097
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.7
1898 Male, age 80, left hemisphere 23.6
2621 Female, age 67, right hemisphere 22.6
1855 Male, age 76, left hemisphere 20.5
1911 Female, age 85, right hemisphere 20.1
2529 Female, age 94, left hemisphere 18.7
2148 Female, age 91, left hemisphere 18.5
Dentate gyrus
nTPM: 21.3
2010 Male, age 76, both hemispheres 25.2
2528 Male, age 74, both hemispheres 22.5
1927 Female, age 91, both hemispheres 22.0
2246 Female, age 85, both hemispheres 21.4
2531 Female, age 67, both hemispheres 18.5
2530 Female, age 94, left hemisphere 18.1
Entorhinal gyrus
nTPM: 18.6
2764 Male, age 80, right hemisphere 22.2
1938 Female, age 85, left hemisphere 21.9
1787 Male, age 76, left hemisphere 19.5
2613 Female, age 94, left hemisphere 18.6
2117 Female, age 91, right hemisphere 15.5
2686 Male, age 75, right hemisphere 13.9
Hippocampus, CA1
nTPM: 23.7
2749 Male, age 80, left hemisphere 32.8
1873 Female, age 85, both hemispheres 24.5
2082 Female, age 91, right hemisphere 20.5
2045 Male, age 76, both hemispheres 20.4
2527 Male, age 74, both hemispheres 20.2
Hippocampus, CA2
nTPM: 20.8
1892 Male, age 76, both hemispheres 24.8
1963 Male, age 80, left hemisphere 24.2
2249 Male, age 74, both hemispheres 23.7
2113 Female, age 91, right hemisphere 18.0
1940 Female, age 85, left hemisphere 16.9
2437 Female, age 94, left hemisphere 16.9
Hippocampus, CA3
nTPM: 21.8
2137 Male, age 80, left hemisphere 25.7
2436 Male, age 74, both hemispheres 24.3
1867 Male, age 76, both hemispheres 24.0
2620 Female, age 94, left hemisphere 20.6
1891 Female, age 85, both hemispheres 20.0
2861 Female, age 67, both hemispheres 15.9
Parahippocampal cortex
nTPM: 19.4
1850 Male, age 80, both hemispheres 22.8
2018 Male, age 76, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.0
1990 Female, age 91, right hemisphere 21.0
2250 Female, age 67, right hemisphere 20.4
2693 Female, age 94, both hemispheres 19.7
2532 Female, age 72, left hemisphere 19.1
2245 Female, age 91, both hemispheres 18.5
2692 Male, age 74, both hemispheres 15.9
2622 Female, age 67, right hemisphere 14.1
Perirhinal gyrus
nTPM: 20.8
1847 Female, age 91, left hemisphere 23.7
1841 Female, age 85, right hemisphere 22.7
1794 Male, age 80, right hemisphere 21.1
2521 Female, age 94, right hemisphere 19.3
2848 Male, age 76, right hemisphere 17.0
Subiculum
nTPM: 18.4
1901 Male, age 80, both hemispheres 21.1
1977 Female, age 85, both hemispheres 20.1
2619 Male, age 74, both hemispheres 17.9
2438 Female, age 94, left hemisphere 17.6
2042 Male, age 76, both hemispheres 17.0
2729 Female, age 91, right hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.7
Samples: 197

Max nTPM: 16.9
Min nTPM: 5.2
Std nTPM: 2.0
Median nTPM: 8.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 16.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 16.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 15.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 13.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 13.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 12.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 12.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 12.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 12.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 12.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.1
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 41.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 34.1
Pig sample Sample description nTPM
Subiculum
nTPM: 31.2
Samples: 4

Max nTPM: 39.1
Min nTPM: 27.6
Sample A Female 39.1
Sample B Female 30.0
Sample C Male 27.6
Sample D Male 28.2
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 34.3
Min nTPM: 24.6
Sample A Female 34.3
Sample B Female 32.0
Sample C Male 33.8
Sample D Male 24.6
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 41.5
Min nTPM: 28.3
Sample A Female 31.9
Sample B Female 41.5
Sample C Male 34.7
Sample D Male 28.3
Ventral hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 30.6
Min nTPM: 25.6
Sample A Female 30.6
Sample B Female 27.3
Sample C Male 25.6
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 29.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 31.7
Min nTPM: 26.5
Sample A Male 26.5
Sample B Male 29.2
Sample C Female 29.3
Sample D Female 31.7
Hippocampal formation
nTPM: 29.0
Samples: 4

Max nTPM: 29.8
Min nTPM: 27.5
Sample A Male 29.8
Sample B Male 29.6
Sample C Female 28.9
Sample D Female 27.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68196916 Antisense, RP_041116_01_D11, Mouse strain C57BL/6J (56 days, male) 0.7

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