HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.3 nTPM
HPA Brain:26.2 nTPM
GTEx:39.3 nTPM
FANTOM5:24.3 Scaled Tags Per Million
Pig:35.2 nTPM
Mouse:52.8 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044518
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.2
Sample id Sample description nTPM
Hippocampus
nTPM: 24.4
1898 Male, age 80, left hemisphere 27.6
2529 Female, age 94, left hemisphere 25.1
2621 Female, age 67, right hemisphere 24.4
1911 Female, age 85, right hemisphere 23.5
1855 Male, age 76, left hemisphere 23.2
2148 Female, age 91, left hemisphere 22.2
Dentate gyrus
nTPM: 24.4
2530 Female, age 94, left hemisphere 33.2
2010 Male, age 76, both hemispheres 24.8
2528 Male, age 74, both hemispheres 22.4
2531 Female, age 67, both hemispheres 22.2
2246 Female, age 85, both hemispheres 22.1
1927 Female, age 91, both hemispheres 21.6
Entorhinal gyrus
nTPM: 26.2
2117 Female, age 91, right hemisphere 30.0
2764 Male, age 80, right hemisphere 28.3
1938 Female, age 85, left hemisphere 27.0
1787 Male, age 76, left hemisphere 24.9
2686 Male, age 75, right hemisphere 23.6
2613 Female, age 94, left hemisphere 23.4
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 29.4
2527 Male, age 74, both hemispheres 25.8
1873 Female, age 85, both hemispheres 21.4
2082 Female, age 91, right hemisphere 18.8
2045 Male, age 76, both hemispheres 16.5
Hippocampus, CA2
nTPM: 26.2
1892 Male, age 76, both hemispheres 34.1
2249 Male, age 74, both hemispheres 27.2
1963 Male, age 80, left hemisphere 26.3
2437 Female, age 94, left hemisphere 25.7
1940 Female, age 85, left hemisphere 22.0
2113 Female, age 91, right hemisphere 21.5
Hippocampus, CA3
nTPM: 24.5
1867 Male, age 76, both hemispheres 29.2
2137 Male, age 80, left hemisphere 27.5
2436 Male, age 74, both hemispheres 27.2
1891 Female, age 85, both hemispheres 25.9
2861 Female, age 67, both hemispheres 23.3
2620 Female, age 94, left hemisphere 13.7
Parahippocampal cortex
nTPM: 24.0
1933 Female, age 85, both hemispheres 27.5
1850 Male, age 80, both hemispheres 26.5
2692 Male, age 74, both hemispheres 26.5
2532 Female, age 72, left hemisphere 25.2
2245 Female, age 91, both hemispheres 25.1
1990 Female, age 91, right hemisphere 24.0
2250 Female, age 67, right hemisphere 23.4
2693 Female, age 94, both hemispheres 22.2
2622 Female, age 67, right hemisphere 21.3
2018 Male, age 76, both hemispheres 18.1
Perirhinal gyrus
nTPM: 25.7
2521 Female, age 94, right hemisphere 30.0
1794 Male, age 80, right hemisphere 26.9
1847 Female, age 91, left hemisphere 25.4
1841 Female, age 85, right hemisphere 23.7
2848 Male, age 76, right hemisphere 22.5
Subiculum
nTPM: 25.2
1901 Male, age 80, both hemispheres 31.3
2042 Male, age 76, both hemispheres 28.6
1977 Female, age 85, both hemispheres 26.4
2619 Male, age 74, both hemispheres 23.7
2438 Female, age 94, left hemisphere 21.0
2729 Female, age 91, right hemisphere 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 197

Max nTPM: 97.1
Min nTPM: 19.5
Std nTPM: 9.0
Median nTPM: 38.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 97.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 66.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 66.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 66.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 63.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 58.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 57.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 55.2
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 53.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 52.6
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 52.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.3
FF:10153-102I9 76 years, female 31.0
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 35.2
Pig sample Sample description nTPM
Subiculum
nTPM: 31.4
Samples: 4

Max nTPM: 41.6
Min nTPM: 25.1
Sample A Female 41.6
Sample B Female 29.8
Sample C Male 29.2
Sample D Male 25.1
Dorsal hippocampus
nTPM: 35.2
Samples: 4

Max nTPM: 42.9
Min nTPM: 24.1
Sample A Female 42.9
Sample B Female 34.3
Sample C Male 39.4
Sample D Male 24.1
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 36.5
Min nTPM: 28.3
Sample A Female 33.8
Sample B Female 32.6
Sample C Male 36.5
Sample D Male 28.3
Ventral hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 38.9
Min nTPM: 25.5
Sample A Female 32.4
Sample B Female 25.5
Sample C Male 38.9
Sample D Male 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 52.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.9
Samples: 4

Max nTPM: 52.2
Min nTPM: 49.5
Sample A Male 49.9
Sample B Male 52.0
Sample C Female 52.2
Sample D Female 49.5
Hippocampal formation
nTPM: 52.8
Samples: 4

Max nTPM: 58.8
Min nTPM: 48.6
Sample A Male 51.1
Sample B Male 48.6
Sample C Female 52.8
Sample D Female 58.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
532651 Antisense, RP_040825_01_A07, Mouse strain C57BL/6J (56 days, male) 5.5

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