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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPNE3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
101.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
65.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
58.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
55.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
55.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
55.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
53.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
53.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
51.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
51.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
49.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
48.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
43.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
40.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
38.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
37.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
35.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
34.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
29.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
29.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
24.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
23.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
23.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPNE3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
103.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
99.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
98.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
84.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
77.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
72.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
71.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
66.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
66.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
65.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
64.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
63.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
63.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
62.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
61.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
61.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
61.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
61.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
60.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
60.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
60.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
59.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
58.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
58.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
57.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
56.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
56.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
56.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
56.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
56.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
55.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
55.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
55.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
55.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
54.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
54.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
54.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
54.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
54.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
54.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
54.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
53.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
53.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
53.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
52.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
52.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
52.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
52.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
52.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
51.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
51.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
51.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
50.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
50.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
50.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
50.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
50.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
49.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
49.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
49.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
49.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
49.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
49.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
49.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
49.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
48.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
48.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
48.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
48.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
48.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
48.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
48.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
48.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
47.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
47.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
47.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
47.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
47.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
47.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
47.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
46.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
46.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
46.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
46.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
46.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
45.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
45.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
45.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
45.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
44.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
44.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
44.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
44.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
44.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
44.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
43.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
43.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
43.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
43.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
43.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
42.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
41.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
41.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
41.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
41.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
41.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
41.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
41.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
41.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
41.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
41.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
41.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
40.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
40.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
40.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
40.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
40.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
40.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
40.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
40.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
40.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
40.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
39.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
39.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
39.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
39.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
39.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
39.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
38.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
38.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
38.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
37.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
37.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
37.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
37.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
37.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
37.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
37.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
37.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
37.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
37.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
37.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
37.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
36.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
36.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
36.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
36.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
36.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
35.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
35.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
35.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
35.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
35.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
35.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
35.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
35.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
35.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
34.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
34.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
34.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
33.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
33.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
33.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
33.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
33.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
33.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
32.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
32.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
32.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
32.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
31.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
31.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
31.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
31.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
31.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
31.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
31.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
30.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
30.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
30.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
29.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
29.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
29.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
28.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
28.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
28.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
28.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
26.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
26.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
26.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
26.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
26.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
26.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
25.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
24.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
24.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
24.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
24.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
21.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
20.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
20.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPNE3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
69.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
62.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
61.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
61.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
60.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
60.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
60.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
57.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
56.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
55.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
54.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
54.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
54.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
53.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
53.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
53.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
50.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
50.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
49.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
47.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
45.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
45.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
44.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
44.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
44.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
41.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
40.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
39.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
39.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
38.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
38.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
38.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
37.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
33.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
32.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
28.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
25.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
25.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
22.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
22.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPNE3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
93.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
72.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
66.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
64.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
62.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
62.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
61.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
54.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
53.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
52.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
51.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
51.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
51.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
48.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
47.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
45.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
43.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
41.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
40.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
40.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
40.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
39.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
38.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
36.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
36.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
34.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
33.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
31.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
31.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
30.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
29.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
29.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
28.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
28.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
27.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
26.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
25.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
24.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
24.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
23.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
23.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
23.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
21.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
7.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
5.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
5.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.3
CPT0023350003
Tumor
0.9
CPT0000640003
Tumor
0.8
CPT0012550003
Tumor
0.6
CPT0025230003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0077110003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0025580004
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0065430003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0012090003
Normal
0.2
CPT0065450001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0014350001
Normal
0.2
CPT0012670003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0000890001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0012640003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0065810003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0075170001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0017850003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0084560003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0066480003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0085670003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0075560003
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0066520001
Normal
-0.6
CPT0075570001
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
