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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF13 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
118.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
96.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
96.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
93.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
88.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
86.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
84.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
77.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
73.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
72.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
72.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
65.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
62.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
60.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
59.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
57.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
57.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
56.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
55.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
55.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
55.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
53.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
53.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
52.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
51.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
50.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
49.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
49.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
47.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
44.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
43.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
43.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
41.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
41.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
39.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
38.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
35.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
35.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
34.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
34.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
31.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
30.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
30.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
28.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
28.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
27.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
27.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
23.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
22.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
22.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF13 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
242.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
198.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
137.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
123.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
122.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
111.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
111.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
106.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
103.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
102.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
101.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
100.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
96.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
96.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
94.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
94.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
94.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
93.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
93.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
92.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
91.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
91.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
90.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
90.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
90.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
90.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
89.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
88.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
88.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
88.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
88.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
87.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
87.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
85.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
85.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
84.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
84.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
84.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
84.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
84.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
83.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
83.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
83.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
83.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
83.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
83.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
83.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
83.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
83.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
82.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
82.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
82.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
82.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
82.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
82.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
82.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
81.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
81.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
81.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
80.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
80.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
80.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
80.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
80.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
80.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
79.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
79.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
79.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
79.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
79.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
78.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
78.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
78.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
78.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
78.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
78.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
77.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
77.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
77.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
77.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
77.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
77.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
76.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
76.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
76.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
76.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
76.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
76.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
76.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
75.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
75.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
75.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
75.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
75.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
75.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
75.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
75.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
75.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
75.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
75.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
74.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
74.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
74.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
74.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
74.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
73.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
73.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
73.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
73.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
73.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
73.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
73.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
72.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
72.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
71.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
71.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
71.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
71.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
71.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
71.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
71.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
70.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
70.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
70.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
70.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
70.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
70.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
70.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
70.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
70.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
69.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
69.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
69.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
69.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
69.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
69.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
69.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
69.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
68.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
68.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
68.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
68.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
68.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
68.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
68.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
68.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
68.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
68.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
67.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
67.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
67.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
67.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
67.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
67.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
67.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
67.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
67.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
67.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
67.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
66.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
66.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
66.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
66.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
66.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
65.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
65.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
65.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
65.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
65.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
65.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
65.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
64.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
64.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
64.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
64.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
64.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
64.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
63.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
63.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
63.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
63.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
63.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
63.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
63.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
63.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
63.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
63.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
62.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
62.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
62.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
62.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
62.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
62.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
62.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
61.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
61.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
61.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
61.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
61.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
61.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
61.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
61.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
61.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
61.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
61.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
60.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
60.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
60.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
60.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
60.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
60.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
60.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
60.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
60.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
59.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
59.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
59.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
59.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
59.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
59.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
59.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
59.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
59.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
58.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
58.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
58.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
58.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
58.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
58.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
58.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
58.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
58.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
58.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
57.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
57.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
57.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
57.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
57.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
57.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
57.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
57.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
57.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
57.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
57.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
56.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
56.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
56.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
56.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
56.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
56.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
56.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
56.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
55.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
55.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
55.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
55.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
55.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
54.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
54.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
54.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
54.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
54.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
54.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
54.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
54.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
53.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
53.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
53.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
53.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
53.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
53.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
53.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
53.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
53.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
52.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
52.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
52.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
52.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
52.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
52.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
52.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
52.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
52.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
52.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
52.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
51.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
51.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
51.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
51.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
51.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
50.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
50.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
50.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
50.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
50.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
50.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
50.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
49.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
49.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
49.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
49.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
49.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
49.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
49.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
49.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
49.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
49.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
48.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
48.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
48.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
47.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
47.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
47.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
47.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
46.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
46.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
46.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
45.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
45.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
45.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
45.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
45.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
45.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
45.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
45.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
45.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
45.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
44.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
44.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
44.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
44.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
44.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
44.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
43.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
43.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
43.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
43.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
43.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
43.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
43.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
42.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
42.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
42.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
42.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
42.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
41.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
41.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
41.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
41.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
41.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
41.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
41.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
41.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
40.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
40.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
40.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
40.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
40.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
39.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
39.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
38.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
38.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
38.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
38.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
38.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
38.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
38.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
37.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
37.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
37.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
37.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
37.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
37.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
37.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
37.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
37.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
36.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
36.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
36.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
36.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
36.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
36.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
36.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
36.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
35.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
35.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
35.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
35.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
35.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
35.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
34.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
33.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
33.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
33.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
32.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
32.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
31.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
31.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
30.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
30.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
29.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
29.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
28.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
28.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
26.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
26.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
24.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
24.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
23.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
22.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
21.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF13 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
74.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
180.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
112.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
110.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
109.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
107.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
105.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
103.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
102.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
102.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
101.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
101.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
99.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
99.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
98.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
98.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
98.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
98.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
97.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
97.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
96.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
96.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
94.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
94.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
94.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
93.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
91.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
91.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
90.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
88.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
88.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
88.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
86.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
86.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
86.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
85.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
85.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
85.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
84.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
84.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
84.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
83.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
82.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
81.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
81.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
81.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
79.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
79.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
79.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
77.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
76.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
75.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
75.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
70.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
68.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
67.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
66.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
66.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
63.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
62.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
61.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
61.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
60.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
59.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
58.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
57.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
57.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
55.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
55.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
55.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
55.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
54.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
54.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
54.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
52.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
52.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
52.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
51.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
50.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
50.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
49.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
46.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
43.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
42.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
41.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
30.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF13 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
155.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
123.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
111.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
103.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
99.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
99.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
95.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
92.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
92.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
91.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
91.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
91.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
91.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
89.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
89.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
87.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
87.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
86.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
85.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
85.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
85.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
84.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
84.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
84.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
83.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
82.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
81.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
81.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
80.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
80.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
79.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
79.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
78.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
77.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
77.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
77.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
76.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
76.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
75.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
75.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
73.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
73.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
72.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
72.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
71.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
71.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
71.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
70.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
70.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
69.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
69.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
69.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
68.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
68.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
68.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
67.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
67.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
66.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
66.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
66.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
63.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
63.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
63.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
63.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
62.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
62.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
61.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
61.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
61.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
61.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
61.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
60.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
59.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
58.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
57.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
57.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
57.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
57.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
57.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
57.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
57.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
56.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
56.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
56.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
55.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
55.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
55.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
55.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
55.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
55.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
55.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
54.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
54.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
54.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
54.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
54.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
53.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
53.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
52.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
52.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
52.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
52.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
52.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
52.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
51.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
51.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
51.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
51.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
51.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
50.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
50.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
50.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
48.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
47.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
47.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
47.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
47.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
47.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
47.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
46.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
46.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
45.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
45.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
45.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
45.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
44.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
44.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
44.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
44.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
44.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
43.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
43.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
42.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
42.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
42.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
42.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
42.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
42.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
42.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
42.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
41.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
41.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
40.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
40.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
40.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
40.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
40.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
40.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
40.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
40.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
39.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
38.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
37.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
37.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
37.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
36.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
36.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
36.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
36.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
35.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
35.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
35.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
34.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
34.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
34.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
33.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
33.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
33.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
31.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
31.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
31.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
31.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
31.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
30.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
30.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
30.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
30.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
30.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
29.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
29.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
28.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
28.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
28.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
27.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
26.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
26.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
24.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
23.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
22.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
22.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
16.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
13.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
7.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.6
CPT0026420001
Normal
1.4
CPT0007320003
Tumor
1.3
CPT0014160003
Tumor
1.0
CPT0006730001
Normal
0.9
CPT0086360003
Tumor
0.9
CPT0088780001
Normal
0.8
CPT0064370003
Tumor
0.7
CPT0063330001
Normal
0.7
CPT0024680001
Normal
0.7
CPT0086970003
Normal
0.7
CPT0078660003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0077140001
Normal
0.6
CPT0015730003
Tumor
0.6
CPT0065820001
Normal
0.6
CPT0007470001
Normal
0.6
CPT0065450001
Normal
0.6
CPT0018250001
Normal
0.5
CPT0092730003
Tumor
0.5
CPT0087050003
Normal
0.5
CPT0092740003
Normal
0.5
CPT0078800003
Tumor
0.5
CPT0012090003
Normal
0.5
CPT0088920001
Normal
0.5
CPT0088500001
Normal
0.5
CPT0065430003
Tumor
0.5
CPT0069010001
Normal
0.5
CPT0012290003
Normal
0.4
CPT0063640001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0065750003
Tumor
0.4
CPT0013790003
Normal
0.4
CPT0009080003
Normal
0.4
CPT0010170001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0017410003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0000790001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0089040001
Normal
0.4
CPT0006950001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0077500001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0086890003
Normal
0.2
CPT0066430001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0025610001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0012570003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0001220008
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0002370001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0092790003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0000870016
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0017450001
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0001540009
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0014370004
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0019160001
Normal
-0.5
CPT0088480003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0069190001
Normal
-0.5
CPT0009000003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0025170003
Tumor
-0.5
CPT0076350001
Normal
-0.6
CPT0079480003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0088690003
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0075130003
Tumor
-0.6
CPT0024670003
Tumor
-0.6
CPT0088900003
Tumor
-0.7
CPT0066470004
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0088630003
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0075720003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0000640003
Tumor
-0.8
CPT0089020003
Tumor
-0.8
CPT0025350003
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0001340003
Tumor
-0.9
CPT0023350003
Tumor
-0.9
CPT0025880003
Tumor
-0.9
CPT0077490003
Tumor
-0.9
CPT0012080003
Tumor
-0.9
CPT0001180009
Tumor
-1.0
CPT0000780007
Tumor
-1.0
CPT0069000003
Tumor
-1.1
CPT0081880003
Tumor
-1.1
CPT0084560003
Tumor
-1.1
CPT0002270011
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
