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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA5B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
4.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
4.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA5B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
325.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
281.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
259.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
227.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
214.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
212.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
197.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
196.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
196.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
193.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
184.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
181.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
181.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
178.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
176.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
173.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
173.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
172.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
171.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
167.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
166.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
165.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
165.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
165.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
162.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
162.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
161.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
161.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
156.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
154.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
152.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
151.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
150.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
150.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
149.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
149.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
148.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
146.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
146.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
145.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
145.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
145.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
143.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
141.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
140.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
139.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
139.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
138.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
137.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
137.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
137.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
136.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
135.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
135.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
134.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
133.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
132.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
129.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
128.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
126.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
126.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
125.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
124.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
124.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
124.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
123.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
123.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
122.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
122.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
121.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
118.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
118.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
118.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
117.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
117.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
117.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
117.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
117.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
115.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
115.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
114.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
114.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
114.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
113.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
113.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
113.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
112.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
112.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
112.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
112.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
111.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
111.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
111.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
110.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
110.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
110.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
110.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
109.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
109.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
109.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
109.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
108.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
108.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
108.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
108.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
107.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
107.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
107.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
107.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
107.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
106.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
106.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
105.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
105.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
104.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
104.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
104.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
103.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
102.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
102.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
102.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
102.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
101.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
101.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
101.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
100.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
100.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
100.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
99.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
99.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
99.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
99.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
99.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
99.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
99.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
98.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
98.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
98.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
97.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
97.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
97.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
96.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
96.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
96.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
96.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
96.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
95.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
95.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
95.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
94.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
94.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
94.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
93.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
93.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
93.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
92.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
92.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
92.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
92.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
92.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
92.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
92.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
92.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
92.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
91.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
91.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
91.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
91.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
91.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
91.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
90.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
90.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
90.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
90.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
89.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
89.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
89.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
88.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
88.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
88.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
88.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
87.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
87.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
87.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
86.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
86.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
86.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
85.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
85.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
85.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
84.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
84.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
84.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
84.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
84.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
84.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
84.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
83.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
83.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
82.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
82.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
82.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
82.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
82.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
82.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
82.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
81.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
81.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
81.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
81.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
81.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
81.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
81.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
81.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
80.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
80.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
80.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
80.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
80.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
80.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
80.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
79.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
79.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
79.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
78.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
78.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
78.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
78.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
77.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
77.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
77.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
77.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
76.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
76.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
76.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
76.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
76.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
75.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
75.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
75.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
75.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
75.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
75.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
75.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
74.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
74.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
74.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
74.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
74.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
74.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
73.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
73.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
73.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
73.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
73.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
73.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
73.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
73.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
72.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
72.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
72.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
72.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
72.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
72.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
72.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
72.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
72.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
72.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
71.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
71.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
71.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
71.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
70.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
70.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
70.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
69.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
69.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
69.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
69.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
68.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
68.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
67.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
67.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
67.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
67.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
67.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
66.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
66.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
66.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
66.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
65.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
65.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
65.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
65.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
65.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
65.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
65.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
65.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
64.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
64.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
64.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
64.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
64.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
63.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
63.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
63.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
62.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
62.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
62.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
62.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
61.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
61.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
61.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
61.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
61.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
61.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
60.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
60.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
60.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
59.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
59.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
59.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
58.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
58.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
58.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
57.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
57.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
57.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
57.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
56.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
56.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
55.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
55.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
55.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
54.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
54.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
54.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
53.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
53.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
53.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
53.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
53.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
53.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
52.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
52.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
52.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
52.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
52.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
51.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
50.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
50.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
50.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
50.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
49.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
49.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
49.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
48.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
47.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
47.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
47.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
46.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
46.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
46.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
46.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
46.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
46.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
46.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
45.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
45.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
45.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
44.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
43.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
43.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
43.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
42.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
42.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
42.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
42.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
42.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
42.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
42.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
41.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
41.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
41.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
40.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
40.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
39.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
39.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
39.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
38.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
38.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
36.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
36.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
35.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
35.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
35.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
34.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
33.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
33.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
33.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
33.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
32.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
30.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
28.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
27.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
26.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
25.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
4.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
3.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
2.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
1.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
1.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA5B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
85.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
370.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
317.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
231.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
199.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
188.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
175.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
174.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
174.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
157.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
156.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
150.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
144.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
140.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
136.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
135.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
130.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
129.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
129.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
127.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
125.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
120.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
120.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
120.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
110.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
107.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
106.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
105.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
103.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
102.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
101.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
100.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
98.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
98.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
98.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
96.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
95.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
95.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
94.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
93.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
91.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
90.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
87.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
87.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
86.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
86.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
85.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
83.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
81.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
79.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
77.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
75.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
73.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
72.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
70.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
70.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
70.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
68.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
68.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
63.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
62.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
62.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
57.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
57.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
56.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
55.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
52.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
51.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
48.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
45.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
45.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
45.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
44.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
41.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
33.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
31.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
5.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
2.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
2.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA5B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
175.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
164.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
148.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
130.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
108.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
88.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
86.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
85.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
82.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
82.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
80.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
74.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
73.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
70.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
70.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
67.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
67.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
66.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
58.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
56.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
53.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
45.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
44.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
43.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
42.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
40.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
39.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
38.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
36.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
35.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
34.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
29.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
26.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
26.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
25.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
25.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
22.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
22.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
22.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
21.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
11.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
8.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
8.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
6.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
6.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
6.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
6.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
5.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
5.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
4.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
4.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
4.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
4.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
3.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
3.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
3.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
3.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
2.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
2.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
2.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
2.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
2.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
2.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
2.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
2.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
2.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
1.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
1.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
1.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
0.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
0.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
0.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
0.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001220008
Tumor
2.3
CPT0088480003
Tumor
2.3
CPT0086820003
Tumor
2.1
CPT0025580004
Tumor
2.0
CPT0009000003
Tumor
1.8
CPT0079480003
Tumor
1.8
CPT0025880003
Tumor
1.8
CPT0088630003
Tumor
1.7
CPT0071150004
Tumor
1.7
CPT0012280003
Tumor
1.7
CPT0007320003
Tumor
1.6
CPT0081600003
Tumor
1.6
CPT0025230003
Tumor
1.5
CPT0014370004
Tumor
1.5
CPT0001540009
Tumor
1.5
CPT0086950003
Tumor
1.4
CPT0077110003
Tumor
1.4
CPT0069000003
Tumor
1.4
CPT0001340003
Tumor
1.4
CPT0023350003
Tumor
1.3
CPT0065430003
Tumor
1.3
CPT0026410003
Tumor
1.3
CPT0025350003
Tumor
1.3
CPT0012670003
Tumor
1.2
CPT0063630003
Tumor
1.2
CPT0025110003
Tumor
1.2
CPT0079270003
Tumor
1.2
CPT0019130003
Tumor
1.1
CPT0088760003
Tumor
1.1
CPT0001260009
Tumor
1.1
CPT0085670003
Tumor
1.1
CPT0012370003
Tumor
1.1
CPT0019990003
Tumor
1.1
CPT0078990003
Tumor
1.1
CPT0086870003
Tumor
1.0
CPT0010160003
Tumor
1.0
CPT0010110003
Tumor
0.9
CPT0014450004
Tumor
0.9
CPT0092730003
Tumor
0.9
CPT0000780007
Tumor
0.9
CPT0081990003
Tumor
0.9
CPT0006440003
Tumor
0.8
CPT0077490003
Tumor
0.7
CPT0015810003
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0063320003
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0065870003
Tumor
0.6
CPT0087040003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0000870016
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0075720003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0006900003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0015910003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0092160003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0089460004
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0078930003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0017410003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0086030003
Tumor
-0.3
CPT0014160003
Tumor
-0.4
CPT0020120003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0025290003
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0078530001
Normal
-0.6
CPT0075560003
Tumor
-0.7
CPT0076330003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0078510003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0079380003
Tumor
-0.8
CPT0007860003
Tumor
-0.8
CPT0077140001
Normal
-0.9
CPT0001500009
Tumor
-0.9
CPT0084560003
Tumor
-0.9
CPT0011410003
Tumor
-1.0
CPT0079410003
Tumor
-1.0
CPT0012550003
Tumor
-1.0
CPT0092290003
Tumor
-1.0
CPT0066470004
Tumor
-1.1
CPT0023690003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0089480003
Normal
-1.1
CPT0081620001
Normal
-1.2
CPT0088550004
Tumor
-1.2
CPT0015730003
Tumor
-1.2
CPT0078940001
Normal
-1.2
CPT0076350001
Normal
-1.2
CPT0069010001
Normal
-1.3
CPT0088640003
Normal
-1.3
CPT0078670001
Normal
-1.3
CPT0006950001
Normal
-1.3
CPT0019160001
Normal
-1.3
CPT0078660003
Tumor
-1.3
CPT0017850003
Tumor
-1.3
CPT0084590001
Normal
-1.4
CPT0001190001
Normal
-1.4
CPT0088500001
Normal
-1.4
CPT0086830003
Normal
-1.4
CPT0014350001
Normal
-1.5
CPT0092190003
Normal
-1.5
CPT0014470001
Normal
-1.5
CPT0000660001
Normal
-1.5
CPT0088570001
Normal
-1.5
CPT0010120001
Normal
-1.5
CPT0025920001
Normal
-1.6
CPT0079300001
Normal
-1.6
CPT0012640003
Normal
-1.6
CPT0077320001
Normal
-1.6
CPT0001270001
Normal
-1.6
CPT0087050003
Normal
-1.6
CPT0007870001
Normal
-1.6
CPT0012090003
Normal
-1.6
CPT0018250001
Normal
-1.6
CPT0012180003
Tumor
-1.6
CPT0025610001
Normal
-1.7
CPT0023360001
Normal
-1.7
CPT0063330001
Normal
-1.7
CPT0001350001
Normal
-1.7
CPT0007470001
Normal
-1.8
CPT0020130001
Normal
-1.8
CPT0088970003
Tumor
-1.8
CPT0088920001
Normal
-1.8
CPT0075570001
Normal
-1.8
CPT0012290003
Normal
-1.8
CPT0006730001
Normal
-1.8
CPT0078800003
Tumor
-1.8
CPT0063640001
Normal
-1.8
CPT0012920003
Normal
-1.8
CPT0086890003
Normal
-1.9
CPT0092740003
Normal
-1.9
CPT0079510001
Normal
-1.9
CPT0064400001
Normal
-1.9
CPT0092790003
Tumor
-1.9
CPT0010170001
Normal
-1.9
CPT0066430001
Normal
-2.0
CPT0009020003
Normal
-2.0
CPT0065450001
Normal
-2.0
CPT0078840001
Normal
-2.0
CPT0001230001
Normal
-2.0
CPT0002270011
Tumor
-2.0
CPT0082010001
Normal
-2.0
CPT0000890001
Normal
-2.0
CPT0023710001
Normal
-2.0
CPT0088710001
Normal
-2.0
CPT0077500001
Normal
-2.1
CPT0020020001
Normal
-2.1
CPT0069190001
Normal
-2.1
CPT0079430001
Normal
-2.1
CPT0026420001
Normal
-2.1
CPT0009080003
Normal
-2.1
CPT0001550001
Normal
-2.1
CPT0006530001
Normal
-2.2
CPT0025060001
Normal
-2.2
CPT0014130001
Normal
-2.2
CPT0002370001
Normal
-2.2
CPT0000790001
Normal
-2.2
CPT0088780001
Normal
-2.2
CPT0017450001
Normal
-2.3
CPT0079180003
Tumor
-2.3
CPT0066520001
Normal
-2.3
CPT0012770003
Normal
-2.3
CPT0079000001
Normal
-2.3
CPT0075170001
Normal
-2.3
CPT0089040001
Normal
-2.3
CPT0086970003
Normal
-2.3
CPT0024680001
Normal
-2.4
CPT0012570003
Normal
-2.7
CPT0013790003
Normal
-2.7
CPT0092310003
Normal
-2.8
CPT0001510001
Normal
-2.8
CPT0092800003
Normal
-3.3
CPT0065820001
Normal
-3.4
CPT0086370003
Normal
-3.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.