HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:3.9 nTPM
HPA Brain:11.2 nTPM
GTEx:3.9 nTPM
FANTOM5:20.9 Scaled Tags Per Million
Pig:9.5 nTPM
Mouse:9.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037393
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
1911 Female, age 85, right hemisphere 10.9
1898 Male, age 80, left hemisphere 10.8
1855 Male, age 76, left hemisphere 10.5
2621 Female, age 67, right hemisphere 10.5
2529 Female, age 94, left hemisphere 10.2
2148 Female, age 91, left hemisphere 9.9
Dentate gyrus
nTPM: 10.5
2246 Female, age 85, both hemispheres 11.1
2528 Male, age 74, both hemispheres 10.8
2531 Female, age 67, both hemispheres 10.8
2010 Male, age 76, both hemispheres 10.7
1927 Female, age 91, both hemispheres 10.5
2530 Female, age 94, left hemisphere 9.3
Entorhinal gyrus
nTPM: 11.2
1787 Male, age 76, left hemisphere 11.8
1938 Female, age 85, left hemisphere 11.6
2613 Female, age 94, left hemisphere 11.6
2117 Female, age 91, right hemisphere 11.3
2764 Male, age 80, right hemisphere 10.5
2686 Male, age 75, right hemisphere 10.2
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 11.3
2527 Male, age 74, both hemispheres 10.9
2045 Male, age 76, both hemispheres 10.5
1873 Female, age 85, both hemispheres 10.4
2082 Female, age 91, right hemisphere 10.4
Hippocampus, CA2
nTPM: 10.6
2249 Male, age 74, both hemispheres 11.6
1963 Male, age 80, left hemisphere 11.0
1892 Male, age 76, both hemispheres 10.5
2113 Female, age 91, right hemisphere 10.4
1940 Female, age 85, left hemisphere 10.3
2437 Female, age 94, left hemisphere 9.6
Hippocampus, CA3
nTPM: 10.8
1891 Female, age 85, both hemispheres 11.5
2620 Female, age 94, left hemisphere 11.2
1867 Male, age 76, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.9
2137 Male, age 80, left hemisphere 10.3
2861 Female, age 67, both hemispheres 9.8
Parahippocampal cortex
nTPM: 10.6
2018 Male, age 76, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.3
1850 Male, age 80, both hemispheres 11.0
2693 Female, age 94, both hemispheres 10.8
2245 Female, age 91, both hemispheres 10.3
1933 Female, age 85, both hemispheres 10.1
2250 Female, age 67, right hemisphere 10.1
2532 Female, age 72, left hemisphere 10.1
2622 Female, age 67, right hemisphere 9.9
2692 Male, age 74, both hemispheres 9.8
Perirhinal gyrus
nTPM: 10.9
1847 Female, age 91, left hemisphere 11.6
1841 Female, age 85, right hemisphere 11.2
2848 Male, age 76, right hemisphere 10.6
1794 Male, age 80, right hemisphere 10.5
2521 Female, age 94, right hemisphere 10.4
Subiculum
nTPM: 10.9
1977 Female, age 85, both hemispheres 11.7
2042 Male, age 76, both hemispheres 11.3
2438 Female, age 94, left hemisphere 11.3
1901 Male, age 80, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.4
2619 Male, age 74, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.9
Samples: 197

Max nTPM: 6.4
Min nTPM: 2.1
Std nTPM: 0.6
Median nTPM: 3.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 6.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 6.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 5.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 5.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 5.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 5.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 5.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 5.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 5.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 5.1
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 5.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.9
FF:10153-102I9 76 years, female 21.2
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.5
Pig sample Sample description nTPM
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 9.9
Min nTPM: 9.1
Sample A Female 9.1
Sample B Female 9.2
Sample C Male 9.7
Sample D Male 9.9
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 8.9
Min nTPM: 8.4
Sample A Female 8.4
Sample B Female 8.8
Sample C Male 8.9
Sample D Male 8.7
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.9
Sample A Female 10.1
Sample B Female 9.0
Sample C Male 8.9
Sample D Male 7.9
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 8.6
Sample C Male 10.0
Sample D Male 9.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.8
Sample A Male 8.3
Sample B Male 7.8
Sample C Female 8.4
Sample D Female 10.0
Hippocampal formation
nTPM: 9.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.5
Sample A Male 8.5
Sample B Male 10.4
Sample C Female 10.2
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
74003379 Antisense, RP_051130_01_E05, Mouse strain C57BL/6J (56 days, male) 0.2

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