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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
124.9
nTPM
HPA Brain:
98.2
nTPM
GTEx:
124.9
nTPM
FANTOM5:
82.8
Scaled Tags Per Million
Pig:
40.5
nTPM
Mouse:
75.1
nTPM
Allen mouse:
15.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
98.2
Sample id
Sample description
nTPM
Amygdala nTPM: 74.2
1987
Female, age 91, left hemisphere
97.0
2517
Female, age 94, left hemisphere
78.2
2514
Male, age 75, right hemisphere
67.3
2814
Male, age 76, right hemisphere
66.4
2695
Female, age 67, right hemisphere
62.0
Basal amygdala nTPM: 83.7
2243
Female, age 91, right hemisphere
106.5
2685
Female, age 94, left hemisphere
96.5
2609
Male, age 75, right hemisphere
86.0
2110
Male, age 80, left hemisphere
75.2
1955
Male, age 76, both hemispheres
70.1
2827
Female, age 67, right hemisphere
67.9
Central amygdala nTPM: 98.2
2826
Female, age 94, left hemisphere
114.1
2239
Male, age 80, left hemisphere
109.5
2515
Male, age 75, right hemisphere
105.8
2701
Female, age 91, right hemisphere
92.0
1905
Male, age 76, both hemispheres
69.7
Corticomedial amygdala nTPM: 83.7
2829
Male, age 80, left hemisphere
99.3
2242
Female, age 91, right hemisphere
93.6
2429
Female, age 94, left hemisphere
93.1
2428
Male, age 75, right hemisphere
80.6
2535
Female, age 67, right hemisphere
79.6
2240
Male, age 76, both hemispheres
55.7
Lateral amygdala nTPM: 90.7
2255
Female, age 91, right hemisphere
106.9
2256
Male, age 80, left hemisphere
104.1
2534
Female, age 94, left hemisphere
98.3
1883
Male, age 76, both hemispheres
80.2
2516
Male, age 75, right hemisphere
79.9
2830
Female, age 67, right hemisphere
74.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
124.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 124.9
Samples: 152
Max nTPM: 353.8
Min nTPM: 11.4
Std nTPM: 43.9
Median nTPM: 123.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
353.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
263.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
239.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
225.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
214.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
196.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
195.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
191.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
188.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
186.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
186.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
184.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
181.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
174.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
174.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
171.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
171.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
171.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
169.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
168.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
168.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
165.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
164.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
164.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
163.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
162.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
156.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
155.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
155.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
155.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
153.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
152.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
151.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
151.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
151.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
149.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
149.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
148.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
147.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
146.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
146.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
146.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
146.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
144.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
143.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
142.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
141.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
141.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
140.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
140.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
140.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
136.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
136.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
136.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
135.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
135.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
135.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
134.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
134.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
134.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
132.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
131.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
130.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
129.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
127.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
127.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
126.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
126.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
126.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
126.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
124.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
124.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
124.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
124.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
123.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
123.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
123.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
123.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
122.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
122.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
121.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
120.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
120.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
118.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
117.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
116.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
115.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
115.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
113.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
112.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
110.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
109.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
109.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
109.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
108.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
108.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
108.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
107.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
106.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
106.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
106.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
106.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
105.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
104.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
104.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
102.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
101.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
101.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
101.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
101.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
100.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
99.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
99.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
98.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
98.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
97.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
97.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
95.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
94.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
93.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
93.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
93.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
92.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
91.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
90.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
90.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
88.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
85.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
84.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
82.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
82.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
78.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
78.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
76.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
76.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
74.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
73.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
69.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
68.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
66.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
65.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
65.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
64.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
64.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
63.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
57.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
57.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
52.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
48.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
30.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
11.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 75.1
Samples: 4
Max nTPM: 79.4
Min nTPM: 72.7
Sample A
Male
72.7
Sample B
Male
75.4
Sample C
Female
79.4
Sample D
Female
73.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.