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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
231.9
nTPM
FANTOM5:
114.0
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
231.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 231.6
1984
Male, age 76, both hemispheres
278.8
2090
Male, age 80, both hemispheres
242.1
2188
Female, age 91, both hemispheres
204.9
2301
Female, age 85, both hemispheres
200.7
Dorsal cochlear nucleus nTPM: 223.4
2378
Male, age 80, both hemispheres
251.3
2370
Male, age 61, both hemispheres
230.9
2802
Male, age 74, right hemisphere
220.7
2058
Male, age 76, both hemispheres
216.8
2187
Female, age 91, both hemispheres
197.4
Dorsal tegmental nucleus nTPM: 205.6
2358
Male, age 61, both hemispheres
232.1
1936
Male, age 76, left hemisphere
210.2
2326
Male, age 74, both hemispheres
201.4
2083
Male, age 80, both hemispheres
178.8
Dorsolateral tegmental area nTPM: 213.1
2141
Male, age 76, both hemispheres
253.9
2360
Male, age 74, both hemispheres
220.1
2337
Male, age 61, both hemispheres
198.4
2654
Male, age 80, both hemispheres
198.0
2751
Female, age 85, both hemispheres
195.3
Kolliker-Fuse nucleus nTPM: 193.7
2793
Female, age 91, left hemisphere
211.4
2315
Male, age 76, right hemisphere
204.2
2163
Male, age 80, both hemispheres
165.4
Lateral lemniscal nuclei nTPM: 226.5
2036
Male, age 80, both hemispheres
273.3
2453
Male, age 74, right hemisphere
241.3
2746
Female, age 85, left hemisphere
217.5
2169
Male, age 76, both hemispheres
215.3
2320
Female, age 91, left hemisphere
185.0
Lateral parabrachial nucleus nTPM: 216.2
2792
Male, age 76, both hemispheres
235.8
2790
Male, age 61, both hemispheres
231.8
2139
Female, age 85, right hemisphere
212.3
2013
Male, age 80, both hemispheres
184.9
Lateral vestibular nucleus nTPM: 200.3
2184
Male, age 76, both hemispheres
207.5
2311
Male, age 80, both hemispheres
193.2
Locus coeruleus nTPM: 203.2
2317
Female, age 72, unknown
235.3
2014
Male, age 55, unknown
222.1
1980
Male, age 76, both hemispheres
197.8
2162
Male, age 80, both hemispheres
195.3
2123
Female, age 91, both hemispheres
195.0
2720
Male, age 74, both hemispheres
190.1
2788
Male, age 74, unknown
187.1
Medial parabrachial nucleus nTPM: 222.1
2463
Female, age 85, right hemisphere
330.5
2156
Male, age 61, both hemispheres
219.6
2786
Male, age 76, both hemispheres
194.6
2854
Male, age 80, both hemispheres
190.0
2170
Female, age 91, both hemispheres
176.0
Medial periolivary nuclei nTPM: 220.9
2791
Male, age 74, right hemisphere
236.4
2063
Male, age 76, both hemispheres
235.2
2171
Female, age 85, both hemispheres
227.0
2081
Male, age 80, both hemispheres
217.9
2458
Female, age 91, both hemispheres
187.9
Motor facial nucleus nTPM: 211.4
2327
Male, age 80, both hemispheres
244.6
2795
Female, age 91, both hemispheres
218.5
2126
Male, age 61, both hemispheres
216.8
2062
Male, age 76, both hemispheres
204.8
2697
Female, age 85, both hemispheres
196.6
2365
Male, age 74, right hemisphere
187.5
Motor trigeminal nucleus nTPM: 223.3
2079
Male, age 80, both hemispheres
263.8
2335
Male, age 61, both hemispheres
246.4
2560
Male, age 74, both hemispheres
224.7
2309
Male, age 76, both hemispheres
191.6
2321
Female, age 91, both hemispheres
190.2
Nuclei of the trapezoid body nTPM: 217.9
2159
Male, age 61, both hemispheres
235.1
2735
Female, age 85, both hemispheres
228.5
2368
Female, age 91, both hemispheres
220.0
2166
Male, age 80, both hemispheres
203.4
1983
Male, age 76, both hemispheres
202.4
Nucleus raphe magnus nTPM: 224.3
2328
Male, age 80, both hemispheres
246.7
2172
Female, age 85, both hemispheres
243.2
2051
Male, age 76, both hemispheres
225.6
2160
Male, age 61, both hemispheres
216.2
2459
Female, age 91, both hemispheres
210.8
2455
Male, age 74, both hemispheres
203.3
Paramedian reticular nucleus nTPM: 190.7
2057
Male, age 80, both hemispheres
202.4
2313
Male, age 61, both hemispheres
190.9
2052
Male, age 76, both hemispheres
190.6
2050
Female, age 85, both hemispheres
178.9
Pedunculopontine tegmental nucleus nTPM: 192.3
2338
Male, age 61, both hemispheres
196.0
2334
Male, age 80, both hemispheres
193.1
1921
Female, age 85, both hemispheres
188.0
Pontine nuclei nTPM: 215.4
2787
Female, age 85, both hemispheres
234.2
1968
Male, age 76, left hemisphere
233.9
1863
Male, age 55, unknown
227.2
2115
Male, age 80, left hemisphere
218.9
2727
Male, age 61, right hemisphere
206.9
2109
Female, age 72, unknown
203.1
2319
Female, age 91, both hemispheres
201.7
2454
Male, age 74, left hemisphere
197.0
Pontine raphe nucleus nTPM: 218.5
2122
Female, age 85, midline
231.5
2853
Male, age 76, midline
205.6
Posteroventral cochlear nucleus nTPM: 218.3
2752
Female, age 85, both hemispheres
254.8
2371
Male, age 61, both hemispheres
227.1
2135
Female, age 91, both hemispheres
224.3
2070
Male, age 76, both hemispheres
197.7
2341
Male, age 80, both hemispheres
187.7
Principal sensory trigeminal nucleus nTPM: 224.5
2008
Male, age 80, left hemisphere
274.1
2158
Male, age 61, both hemispheres
239.0
2367
Female, age 91, left hemisphere
204.6
2324
Male, age 76, both hemispheres
180.2
Reticular pontine nucleus, caudal nTPM: 214.8
2332
Male, age 80, right hemisphere
233.4
2457
Female, age 91, both hemispheres
230.1
2092
Male, age 76, both hemispheres
219.6
2559
Male, age 74, both hemispheres
175.9
Reticular pontine nucleus, oral nTPM: 172.3
2167
Male, age 76, both hemispheres
216.1
2012
Female, age 85, both hemispheres
208.5
1939
Male, age 80, both hemispheres
191.5
2366
Female, age 91, both hemispheres
165.1
2361
Male, age 74, both hemispheres
80.3
Reticulotegmental nucleus nTPM: 222.9
2333
Male, age 80, both hemispheres
246.1
2322
Female, age 91, both hemispheres
223.0
2452
Male, age 74, both hemispheres
214.0
2325
Male, age 76, both hemispheres
208.4
Spinal trigeminal nucleus, oral nTPM: 218.2
2737
Female, age 85, both hemispheres
236.0
1978
Male, age 76, both hemispheres
223.8
2164
Male, age 80, both hemispheres
194.8
Subcoeruleus area nTPM: 217.1
2451
Male, age 74, both hemispheres
240.4
2089
Male, age 76, left hemisphere
226.7
1958
Male, age 80, both hemispheres
209.9
2369
Female, age 85, left hemisphere
208.4
2323
Female, age 91, left hemisphere
200.1
Superior olive nTPM: 227.0
2561
Female, age 91, both hemispheres
231.8
1875
Female, age 85, both hemispheres
231.7
2020
Male, age 76, both hemispheres
231.7
2329
Male, age 80, right hemisphere
222.0
2364
Male, age 74, right hemisphere
218.0
Ventral periolivary nuclei nTPM: 231.9
2165
Male, age 80, both hemispheres
253.9
2130
Female, age 85, both hemispheres
238.2
2023
Male, age 76, both hemispheres
233.0
2794
Female, age 91, left hemisphere
202.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 200.5
2359
Male, age 61, both hemispheres
207.8
2840
Female, age 85, both hemispheres
204.2
2449
Male, age 74, both hemispheres
201.4
2161
Male, age 80, both hemispheres
199.7
1959
Male, age 76, both hemispheres
197.3
2456
Female, age 91, both hemispheres
192.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
