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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
73.2
nTPM
HPA Brain:
39.1
nTPM
GTEx:
73.2
nTPM
FANTOM5:
157.2
Scaled Tags Per Million
Pig:
48.6
nTPM
Mouse:
74.0
nTPM
Allen mouse:
2.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
39.1
Sample id
Sample description
nTPM
Amygdala nTPM: 38.8
2814
Male, age 76, right hemisphere
45.4
1987
Female, age 91, left hemisphere
42.9
2514
Male, age 75, right hemisphere
39.3
2517
Female, age 94, left hemisphere
34.4
2695
Female, age 67, right hemisphere
31.8
Basal amygdala nTPM: 37.3
2110
Male, age 80, left hemisphere
40.1
2609
Male, age 75, right hemisphere
39.9
2243
Female, age 91, right hemisphere
39.1
1955
Male, age 76, both hemispheres
38.2
2685
Female, age 94, left hemisphere
35.1
2827
Female, age 67, right hemisphere
31.6
Central amygdala nTPM: 37.2
2239
Male, age 80, left hemisphere
44.1
1905
Male, age 76, both hemispheres
40.0
2515
Male, age 75, right hemisphere
34.2
2701
Female, age 91, right hemisphere
34.1
2826
Female, age 94, left hemisphere
33.5
Corticomedial amygdala nTPM: 36.0
2429
Female, age 94, left hemisphere
41.6
2242
Female, age 91, right hemisphere
38.5
2240
Male, age 76, both hemispheres
37.5
2428
Male, age 75, right hemisphere
34.2
2535
Female, age 67, right hemisphere
32.9
2829
Male, age 80, left hemisphere
31.1
Lateral amygdala nTPM: 39.1
2516
Male, age 75, right hemisphere
44.1
2255
Female, age 91, right hemisphere
40.3
2256
Male, age 80, left hemisphere
39.0
1883
Male, age 76, both hemispheres
38.3
2830
Female, age 67, right hemisphere
36.9
2534
Female, age 94, left hemisphere
36.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 73.2
Samples: 152
Max nTPM: 148.9
Min nTPM: 33.4
Std nTPM: 18.6
Median nTPM: 70.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
148.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
144.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
119.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
115.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
113.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
110.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
109.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
106.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
101.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
100.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
100.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
99.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
99.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
97.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
96.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
95.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
95.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
94.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
94.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
93.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
92.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
91.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
91.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
90.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
89.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
89.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
89.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
88.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
88.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
87.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
87.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
87.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
87.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
86.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
85.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
85.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
85.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
85.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
84.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
83.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
83.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
83.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
83.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
83.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
82.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
82.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
80.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
79.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
79.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
79.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
79.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
79.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
77.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
77.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
77.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
76.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
75.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
75.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
75.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
75.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
75.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
74.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
74.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
74.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
74.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
73.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
73.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
73.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
73.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
72.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
72.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
72.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
71.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
71.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
70.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
70.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
70.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
69.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
69.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
69.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
68.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
68.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
68.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
67.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
67.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
66.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
66.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
66.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
66.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
66.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
66.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
65.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
64.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
64.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
64.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
63.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
63.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
63.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
62.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
62.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
61.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
61.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
61.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
60.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
60.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
60.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
60.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
60.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
59.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
59.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
59.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
58.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
58.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
58.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
58.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
58.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
58.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
58.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
57.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
57.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
57.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
57.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
57.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
57.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
57.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
56.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
56.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
55.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
55.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
54.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
54.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
52.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
52.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
51.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
50.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
50.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
50.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
50.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
49.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
46.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
45.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
45.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
45.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
43.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 74.0
Samples: 4
Max nTPM: 76.4
Min nTPM: 70.8
Sample A
Male
76.4
Sample B
Male
76.0
Sample C
Female
70.8
Sample D
Female
72.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.