HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:42.3 nTPM
HPA Brain:62.7 nTPM
GTEx:42.3 nTPM
FANTOM5:19.3 Scaled Tags Per Million
Pig:5.8 nTPM
Mouse:4.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017700
Glial cells High
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 62.7
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
1911 Female, age 85, right hemisphere 59.5
1898 Male, age 80, left hemisphere 43.7
2621 Female, age 67, right hemisphere 43.7
2529 Female, age 94, left hemisphere 36.6
2148 Female, age 91, left hemisphere 34.0
1855 Male, age 76, left hemisphere 33.9
Dentate gyrus
nTPM: 43.8
2530 Female, age 94, left hemisphere 70.9
2528 Male, age 74, both hemispheres 44.7
2246 Female, age 85, both hemispheres 41.5
2531 Female, age 67, both hemispheres 39.1
2010 Male, age 76, both hemispheres 37.5
1927 Female, age 91, both hemispheres 28.9
Entorhinal gyrus
nTPM: 51.8
2117 Female, age 91, right hemisphere 82.8
2764 Male, age 80, right hemisphere 63.5
2613 Female, age 94, left hemisphere 49.4
1938 Female, age 85, left hemisphere 43.2
2686 Male, age 75, right hemisphere 41.3
1787 Male, age 76, left hemisphere 30.6
Hippocampus, CA1
nTPM: 35.5
2082 Female, age 91, right hemisphere 45.4
2527 Male, age 74, both hemispheres 44.1
1873 Female, age 85, both hemispheres 41.3
2749 Male, age 80, left hemisphere 33.7
2045 Male, age 76, both hemispheres 13.0
Hippocampus, CA2
nTPM: 44.0
2249 Male, age 74, both hemispheres 65.0
1963 Male, age 80, left hemisphere 49.0
2437 Female, age 94, left hemisphere 46.8
2113 Female, age 91, right hemisphere 40.5
1940 Female, age 85, left hemisphere 39.7
1892 Male, age 76, both hemispheres 23.0
Hippocampus, CA3
nTPM: 35.9
1891 Female, age 85, both hemispheres 58.4
2620 Female, age 94, left hemisphere 50.1
2436 Male, age 74, both hemispheres 31.4
1867 Male, age 76, both hemispheres 28.2
2861 Female, age 67, both hemispheres 26.2
2137 Male, age 80, left hemisphere 21.1
Parahippocampal cortex
nTPM: 38.4
2692 Male, age 74, both hemispheres 56.9
2532 Female, age 72, left hemisphere 53.7
1990 Female, age 91, right hemisphere 48.9
2693 Female, age 94, both hemispheres 47.3
1850 Male, age 80, both hemispheres 39.3
2245 Female, age 91, both hemispheres 34.5
1933 Female, age 85, both hemispheres 31.2
2018 Male, age 76, both hemispheres 25.4
2622 Female, age 67, right hemisphere 24.8
2250 Female, age 67, right hemisphere 22.1
Perirhinal gyrus
nTPM: 24.8
1794 Male, age 80, right hemisphere 32.7
2521 Female, age 94, right hemisphere 27.6
2848 Male, age 76, right hemisphere 24.1
1847 Female, age 91, left hemisphere 20.2
1841 Female, age 85, right hemisphere 19.4
Subiculum
nTPM: 62.7
2042 Male, age 76, both hemispheres 90.1
1901 Male, age 80, both hemispheres 76.2
1977 Female, age 85, both hemispheres 62.5
2619 Male, age 74, both hemispheres 55.0
2438 Female, age 94, left hemisphere 49.6
2729 Female, age 91, right hemisphere 43.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 42.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.3
Samples: 197

Max nTPM: 144.5
Min nTPM: 3.7
Std nTPM: 28.5
Median nTPM: 34.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 144.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 134.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 133.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 127.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 121.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 113.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 113.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 102.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 102.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 102.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 101.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.3
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 16.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.8
Pig sample Sample description nTPM
Subiculum
nTPM: 3.7
Samples: 4

Max nTPM: 3.7
Min nTPM: 3.6
Sample A Female 3.6
Sample B Female 3.7
Sample C Male 3.7
Sample D Male 3.6
Dorsal hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 9.1
Min nTPM: 2.9
Sample A Female 6.9
Sample B Female 4.2
Sample C Male 9.1
Sample D Male 2.9
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 3.1
Sample C Male 3.3
Sample D Male 3.7
Ventral hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 2.8
Sample A Female 4.1
Sample B Female 2.8
Sample C Male 5.0
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.1
Sample A Male 5.1
Sample B Male 4.4
Sample C Female 4.2
Sample D Female 4.1
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.4
Sample A Male 3.4
Sample B Male 3.5
Sample C Female 5.4
Sample D Female 5.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69059801 Antisense, RP_050317_04_A06, Mouse strain C57BL/6J (56 days, male) 0.6
73617582 Antisense, RP_051130_02_A08, Mouse strain C57BL/6J (56 days, male) 0.3
77620357 Antisense, RP_070205_01_C04, Mouse strain C57BL/6J (56 days, male) 0.1

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