HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:47.1 nTPM
HPA Brain:95.5 nTPM
GTEx:47.1 nTPM
FANTOM5:35.6 Scaled Tags Per Million
Pig:51.7 nTPM
Mouse:32.3 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044341Antibody CAB026388
Glial cells MediumMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.5
Sample id Sample description nTPM
Hippocampus
nTPM: 89.4
2621 Female, age 67, right hemisphere 111.9
2529 Female, age 94, left hemisphere 107.6
2148 Female, age 91, left hemisphere 94.7
1855 Male, age 76, left hemisphere 76.2
1898 Male, age 80, left hemisphere 75.6
1911 Female, age 85, right hemisphere 70.6
Dentate gyrus
nTPM: 88.2
2531 Female, age 67, both hemispheres 127.1
2530 Female, age 94, left hemisphere 93.4
2246 Female, age 85, both hemispheres 87.1
2528 Male, age 74, both hemispheres 78.2
1927 Female, age 91, both hemispheres 77.0
2010 Male, age 76, both hemispheres 66.5
Entorhinal gyrus
nTPM: 92.4
2686 Male, age 75, right hemisphere 107.7
2613 Female, age 94, left hemisphere 95.2
2117 Female, age 91, right hemisphere 93.4
2764 Male, age 80, right hemisphere 91.8
1938 Female, age 85, left hemisphere 83.6
1787 Male, age 76, left hemisphere 82.9
Hippocampus, CA1
nTPM: 75.2
2082 Female, age 91, right hemisphere 87.7
2527 Male, age 74, both hemispheres 81.2
1873 Female, age 85, both hemispheres 75.0
2045 Male, age 76, both hemispheres 66.4
2749 Male, age 80, left hemisphere 65.7
Hippocampus, CA2
nTPM: 73.5
2437 Female, age 94, left hemisphere 92.8
1963 Male, age 80, left hemisphere 81.7
2113 Female, age 91, right hemisphere 78.1
1940 Female, age 85, left hemisphere 70.0
1892 Male, age 76, both hemispheres 63.0
2249 Male, age 74, both hemispheres 55.5
Hippocampus, CA3
nTPM: 95.5
2861 Female, age 67, both hemispheres 153.2
2620 Female, age 94, left hemisphere 141.0
2137 Male, age 80, left hemisphere 75.3
1891 Female, age 85, both hemispheres 72.1
1867 Male, age 76, both hemispheres 66.8
2436 Male, age 74, both hemispheres 64.3
Parahippocampal cortex
nTPM: 84.1
2622 Female, age 67, right hemisphere 111.9
2245 Female, age 91, both hemispheres 99.2
2693 Female, age 94, both hemispheres 89.4
2692 Male, age 74, both hemispheres 86.7
2532 Female, age 72, left hemisphere 84.1
2250 Female, age 67, right hemisphere 80.7
1933 Female, age 85, both hemispheres 80.6
1990 Female, age 91, right hemisphere 71.2
1850 Male, age 80, both hemispheres 68.9
2018 Male, age 76, both hemispheres 67.8
Perirhinal gyrus
nTPM: 80.0
2521 Female, age 94, right hemisphere 89.9
2848 Male, age 76, right hemisphere 82.6
1794 Male, age 80, right hemisphere 81.2
1841 Female, age 85, right hemisphere 74.1
1847 Female, age 91, left hemisphere 72.3
Subiculum
nTPM: 79.7
2619 Male, age 74, both hemispheres 89.7
2438 Female, age 94, left hemisphere 83.7
2042 Male, age 76, both hemispheres 80.2
1977 Female, age 85, both hemispheres 78.7
2729 Female, age 91, right hemisphere 76.9
1901 Male, age 80, both hemispheres 68.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 47.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.1
Samples: 197

Max nTPM: 83.4
Min nTPM: 21.9
Std nTPM: 11.8
Median nTPM: 46.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 83.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 82.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 80.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 77.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 75.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 73.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 70.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 69.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 69.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 69.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 68.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 35.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.6
FF:10153-102I9 76 years, female 44.3
FF:10169-103B7 60 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 51.7
Pig sample Sample description nTPM
Subiculum
nTPM: 40.1
Samples: 4

Max nTPM: 52.0
Min nTPM: 33.1
Sample A Female 52.0
Sample B Female 33.6
Sample C Male 41.7
Sample D Male 33.1
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 40.4
Min nTPM: 33.1
Sample A Female 40.4
Sample B Female 37.5
Sample C Male 35.2
Sample D Male 33.1
Entorhinal cortex
nTPM: 51.7
Samples: 4

Max nTPM: 59.6
Min nTPM: 40.7
Sample A Female 59.6
Sample B Female 40.7
Sample C Male 58.8
Sample D Male 47.8
Ventral hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 53.9
Min nTPM: 29.2
Sample A Female 29.2
Sample B Female 30.0
Sample C Male 53.9
Sample D Male 41.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 34.9
Min nTPM: 27.6
Sample A Male 34.3
Sample B Male 32.3
Sample C Female 27.6
Sample D Female 34.9
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 26.8
Min nTPM: 21.7
Sample A Male 21.7
Sample B Male 24.4
Sample C Female 23.7
Sample D Female 26.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
71307244 Antisense, RP_050825_01_E05, Mouse strain C57BL/6J (56 days, male) 4.7

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