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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOLLIP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
123.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
115.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
110.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
109.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
109.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
103.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
95.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
92.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
91.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
86.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
85.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
84.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
84.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
82.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
81.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
80.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
80.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
80.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
79.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
79.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
79.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
78.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
78.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
78.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
76.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
76.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
76.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
75.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
73.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
71.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
69.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
69.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
69.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
68.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
67.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
67.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
67.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
66.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
66.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
66.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
66.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
66.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
66.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
66.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
66.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
66.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
66.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
65.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
65.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
65.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
65.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
65.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
65.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
63.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
63.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
63.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
62.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
62.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
62.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
62.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
61.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
61.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
61.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
61.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
61.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
60.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
60.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
60.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
60.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
60.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
60.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
59.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
59.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
59.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
59.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
58.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
58.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
58.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
58.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
57.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
57.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
57.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
57.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
56.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
56.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
55.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
55.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
55.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
54.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
54.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
54.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
54.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
53.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
53.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
53.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
53.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
53.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
53.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
52.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
52.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
52.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
51.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
51.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
51.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
51.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
51.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
51.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
51.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
50.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
50.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
50.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
50.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
50.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
50.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
49.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
49.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
49.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
49.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
49.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
49.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
49.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
49.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
48.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
48.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
48.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
48.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
48.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
48.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
48.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
48.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
48.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
48.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
47.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
47.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
47.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
47.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
47.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
47.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
47.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
46.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
46.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
46.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
46.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
46.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
46.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
46.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
46.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
46.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
46.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
46.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
46.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
45.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
45.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
45.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
45.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
45.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
45.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
45.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
44.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
44.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
44.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
44.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
44.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
44.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
44.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
44.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
44.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
44.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
44.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
44.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
44.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
44.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
44.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
43.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
43.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
43.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
43.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
43.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
42.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
42.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
42.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
42.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
42.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
42.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
42.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
42.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
42.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
41.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
41.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
41.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
41.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
41.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
41.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
41.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
41.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
41.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
41.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
40.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
40.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
40.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
39.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
39.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
39.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
39.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
39.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
39.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
39.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
38.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
38.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
38.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
38.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
38.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
38.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
38.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
38.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
38.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
38.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
37.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
37.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
37.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
37.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
37.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
37.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
37.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
37.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
37.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
37.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
36.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
36.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
36.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
36.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
36.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
36.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
36.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
36.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
35.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
35.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
35.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
34.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
34.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
34.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
34.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
34.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
34.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
34.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
34.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
34.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
34.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
34.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
34.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
34.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
34.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
33.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
33.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
33.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
33.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
33.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
33.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
33.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
33.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
33.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
33.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
32.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
32.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
32.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
32.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
32.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
32.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
32.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
32.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
32.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
32.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
31.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
31.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
31.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
31.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
31.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
31.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
31.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
31.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
31.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
31.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
31.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
31.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
30.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
30.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
30.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
29.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
29.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
29.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
29.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
28.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
28.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
28.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
28.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
28.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
28.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
28.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
27.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
27.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
27.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
27.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
27.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
27.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
27.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
27.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
27.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
26.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
26.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
26.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
26.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
26.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
26.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
26.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
26.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
26.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
26.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
26.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
25.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
24.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
24.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
24.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
24.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
24.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
23.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
22.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
22.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
21.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
21.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
21.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
21.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
21.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
20.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
20.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
20.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
20.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
19.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
19.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
19.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
19.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
18.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
18.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
18.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
18.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
17.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
17.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
17.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOLLIP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
231
Samples
Sample
Description
TPM
DO45217
0 years, female, NA, stage:3, dead, 270 days
84.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
80.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
75.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
68.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
66.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
63.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
62.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
62.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
58.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
56.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
55.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
55.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
54.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
54.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
54.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
50.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
50.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
49.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
49.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
48.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
47.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
46.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
46.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
45.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
45.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
44.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
42.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
41.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
40.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
40.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
40.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
39.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
39.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
39.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
39.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
39.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
38.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
38.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
38.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
37.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
37.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
37.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
37.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
37.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
37.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
37.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
37.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
36.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
36.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
36.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
35.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
35.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
34.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
34.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
34.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
34.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
34.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
34.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
34.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
33.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
33.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
33.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
33.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
33.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
33.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
33.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
33.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
33.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
33.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
32.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
32.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
32.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
31.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
31.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
31.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
31.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
31.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
31.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
30.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
30.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
30.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
30.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
30.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
30.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
30.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
30.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
30.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
29.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
29.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
29.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
29.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
29.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
29.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
29.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
28.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
28.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
28.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
28.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
28.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
28.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
28.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
27.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
27.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
27.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
27.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
27.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
27.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
27.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
27.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
27.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
27.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
27.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
27.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
26.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
26.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
26.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
26.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
26.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
26.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
26.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
26.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
26.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
26.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
26.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
26.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
26.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
25.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
25.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
25.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
25.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
25.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
25.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
25.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
25.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
25.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
25.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
25.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
25.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
25.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
25.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
25.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
24.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
24.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
24.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
24.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
24.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
23.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
23.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
23.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
23.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
23.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
23.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
23.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
23.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
23.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
23.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
23.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
23.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
23.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
22.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
22.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
22.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
22.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
21.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
21.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
21.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
21.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
21.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
20.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
20.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
20.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
20.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
20.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
20.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
19.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
19.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
19.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
19.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
18.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
18.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
18.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
18.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
17.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
17.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
17.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
17.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
17.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
16.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
15.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
14.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
13.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
11.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1027
Tumor
1.2
777
Tumor
0.8
737
Tumor
0.8
911
Tumor
0.8
913
Tumor
0.7
515
Tumor
0.7
615
Tumor
0.7
746
Normal
0.6
616
Normal
0.6
627
Tumor
0.6
147
Tumor
0.6
981
Tumor
0.6
912
Normal
0.6
517
Tumor
0.5
648
Normal
0.5
436
Normal
0.5
868
Normal
0.5
867
Tumor
0.5
685
Tumor
0.5
756
Normal
0.5
727
Tumor
0.5
162
Normal
0.4
664
Normal
0.4
786
Normal
0.4
1041
Tumor
0.4
745
Tumor
0.4
663
Tumor
0.4
171
Tumor
0.4
824
Normal
0.4
354
Normal
0.4
363
Tumor
0.4
472
Normal
0.4
815
Tumor
0.4
666
Normal
0.4
482
Normal
0.4
723
Tumor
0.4
568
Normal
0.4
481
Tumor
0.4
636
Normal
0.4
554
Normal
0.4
1045
Tumor
0.4
564
Normal
0.4
642
Normal
0.4
462
Normal
0.4
714
Normal
0.4
938
Normal
0.3
271
Tumor
0.3
628
Normal
0.3
432
Normal
0.3
635
Tumor
0.3
618
Normal
0.3
446
Normal
0.3
285
Tumor
0.3
858
Normal
0.3
866
Normal
0.3
968
Normal
0.3
862
Normal
0.3
778
Normal
0.3
527
Tumor
0.3
428
Normal
0.3
394
Normal
0.3
136
Normal
0.3
882
Normal
0.3
356
Normal
0.3
864
Normal
0.3
755
Tumor
0.3
1022
Normal
0.3
977
Tumor
0.3
722
Normal
0.3
924
Normal
0.3
148
Normal
0.3
944
Normal
0.3
534
Normal
0.3
641
Tumor
0.3
278
Normal
0.3
716
Normal
0.3
558
Normal
0.3
341
Tumor
0.3
127
Tumor
0.3
884
Normal
0.3
365
Tumor
0.3
528
Normal
0.3
572
Normal
0.3
925
Tumor
0.3
487
Tumor
0.3
232
Normal
0.3
728
Normal
0.3
328
Normal
0.3
124
Normal
0.3
426
Normal
0.3
816
Normal
0.3
1043
Tumor
0.3
914
Normal
0.3
741
Tumor
0.3
1021
Tumor
0.3
743
Tumor
0.3
412
Normal
0.3
172
Normal
0.3
466
Normal
0.3
484
Normal
0.3
221
Tumor
0.3
1014
Normal
0.3
298
Normal
0.3
513
Tumor
0.2
964
Normal
0.2
414
Normal
0.2
464
Normal
0.2
361
Tumor
0.2
286
Normal
0.2
257
Tumor
0.2
526
Normal
0.2
222
Normal
0.2
1016
Normal
0.2
448
Normal
0.2
922
Normal
0.2
443
Tumor
0.2
533
Tumor
0.2
368
Normal
0.2
114
Normal
0.2
424
Normal
0.2
451
Tumor
0.2
926
Normal
0.2
573
Tumor
0.2
212
Normal
0.2
958
Normal
0.2
314
Normal
0.2
518
Normal
0.2
392
Normal
0.2
128
Normal
0.2
921
Tumor
0.2
1046
Normal
0.2
186
Normal
0.2
818
Normal
0.2
516
Normal
0.2
574
Normal
0.2
123
Tumor
0.2
742
Normal
0.2
952
Normal
0.2
617
Tumor
0.2
364
Normal
0.2
918
Normal
0.2
452
Normal
0.2
461
Tumor
0.2
695
Tumor
0.2
874
Normal
0.2
696
Normal
0.2
142
Normal
0.2
863
Tumor
0.2
396
Normal
0.2
1032
Normal
0.2
488
Normal
0.2
376
Normal
0.2
465
Tumor
0.2
686
Normal
0.2
915
Tumor
0.2
422
Normal
0.2
546
Normal
0.2
878
Normal
0.2
662
Normal
0.2
223
Tumor
0.2
1026
Normal
0.2
954
Normal
0.2
427
Tumor
0.2
514
Normal
0.2
284
Normal
0.2
456
Normal
0.2
111
Normal
0.2
953
Tumor
0.2
785
Tumor
0.2
738
Normal
0.2
982
Normal
0.2
494
Normal
0.1
112
Tumor
0.1
313
Tumor
0.1
258
Normal
0.1
1042
Normal
0.1
416
Normal
0.1
525
Tumor
0.1
721
Tumor
0.1
976
Normal
0.1
955
Tumor
0.1
421
Tumor
0.1
1015
Tumor
0.1
388
Normal
0.1
228
Normal
0.1
553
Tumor
0.1
386
Normal
0.1
358
Normal
0.1
261
Tumor
0.1
196
Normal
0.1
342
Normal
0.1
672
Normal
0.1
366
Normal
0.1
978
Normal
0.1
671
Tumor
0.1
943
Tumor
0.1
224
Normal
0.1
327
Tumor
0.1
272
Normal
0.1
471
Tumor
0.1
563
Tumor
0.1
331
Tumor
0.1
362
Normal
0.1
814
Normal
0.1
817
Tumor
0.1
916
Normal
0.1
713
Tumor
0.1
545
Tumor
0.1
433
Tumor
0.1
145
Tumor
0.1
813
Tumor
0.1
873
Tumor
0.1
857
Tumor
0.1
312
Normal
0.1
724
Normal
0.1
132
Normal
0.1
477
Tumor
0.1
352
Normal
0.1
463
Tumor
0.1
956
Normal
0.1
478
Normal
0.1
468
Normal
0.1
1013
Tumor
0.1
425
Tumor
0.1
262
Normal
0.1
126
Normal
0.0
483
Tumor
0.0
1028
Normal
0.0
744
Normal
0.0
353
Tumor
0.0
415
Tumor
0.0
384
Normal
0.0
538
Normal
0.0
431
Tumor
0.0
923
Tumor
0.0
214
Normal
0.0
698
Normal
0.0
268
Normal
0.0
984
Normal
0.0
455
Tumor
0.0
492
Normal
0.0
852
Normal
0.0
966
Normal
0.0
1044
Normal
0.0
877
Tumor
0.0
498
Normal
0.0
557
Tumor
0.0
231
Tumor
0.0
146
Normal
0.0
131
Tumor
0.0
218
Normal
0.0
493
Tumor
0.0
125
Tumor
-0.1
332
Normal
-0.1
865
Tumor
-0.1
344
Normal
-0.1
297
Tumor
-0.1
137
Tumor
-0.1
138
Normal
-0.1
1025
Tumor
-0.1
411
Tumor
-0.1
975
Tumor
-0.1
444
Normal
-0.1
883
Tumor
-0.1
445
Tumor
-0.1
823
Tumor
-0.1
283
Tumor
-0.1
647
Tumor
-0.1
983
Tumor
-0.1
665
Tumor
-0.1
113
Tumor
-0.1
188
Normal
-0.1
524
Normal
-0.1
567
Tumor
-0.1
343
Tumor
-0.2
963
Tumor
-0.2
267
Tumor
-0.2
571
Tumor
-0.2
434
Normal
-0.2
715
Tumor
-0.2
851
Tumor
-0.2
497
Tumor
-0.2
135
Tumor
-0.2
383
Tumor
-0.2
474
Normal
-0.2
413
Tumor
-0.2
917
Tumor
-0.2
435
Tumor
-0.2
375
Tumor
-0.2
217
Tumor
-0.2
423
Tumor
-0.2
861
Tumor
-0.2
141
Tumor
-0.2
192
Normal
-0.2
697
Tumor
-0.2
393
Tumor
-0.2
965
Tumor
-0.2
881
Tumor
-0.2
191
Tumor
-0.2
213
Tumor
-0.3
187
Tumor
-0.3
536
Normal
-0.3
161
Tumor
-0.3
195
Tumor
-0.3
277
Tumor
-0.3
357
Tumor
-0.3
491
Tumor
-0.3
395
Tumor
-0.3
227
Tumor
-0.3
1031
Tumor
-0.3
957
Tumor
-0.3
473
Tumor
-0.3
951
Tumor
-0.3
447
Tumor
-0.4
367
Tumor
-0.4
185
Tumor
-0.4
535
Tumor
-0.4
523
Tumor
-0.4
391
Tumor
-0.4
467
Tumor
-0.4
351
Tumor
-0.5
967
Tumor
-0.5
387
Tumor
-0.5
937
Tumor
-0.5
355
Tumor
-0.5
537
Tumor
-0.6
311
Tumor
-0.6
211
Tumor
-0.6
385
Tumor
-0.7
661
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
