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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITCH is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
58.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
40.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
37.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
31.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
29.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
28.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
25.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
25.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
24.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
24.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
23.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
22.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
22.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
22.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
21.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
20.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
20.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
19.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
19.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
19.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
18.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
17.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
17.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
16.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
16.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
16.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
15.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
15.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
15.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
15.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
13.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
13.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
13.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
13.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
12.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
12.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
12.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
12.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
11.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
11.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
10.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
10.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
10.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
9.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
8.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
6.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
5.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITCH is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
231
Samples
Sample
Description
TPM
DO45197
0 years, male, NA, stage:2, alive, 1170 days
53.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
43.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
28.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
26.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
25.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
25.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
24.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
22.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
22.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
21.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
21.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
21.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
20.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
20.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
19.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
19.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
17.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
17.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
17.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
17.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
16.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
16.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
16.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
16.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
15.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
15.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
15.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
15.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
14.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
14.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
12.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
12.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
12.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
11.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
11.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
10.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
10.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
10.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
9.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
9.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
9.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
9.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
9.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
9.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
8.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
6.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
465
Tumor
0.9
1013
Tumor
0.7
435
Tumor
0.6
445
Tumor
0.6
981
Tumor
0.6
647
Tumor
0.6
123
Tumor
0.5
431
Tumor
0.4
112
Tumor
0.4
862
Normal
0.4
171
Tumor
0.4
414
Normal
0.4
426
Normal
0.3
785
Tumor
0.3
411
Tumor
0.3
422
Normal
0.3
818
Normal
0.3
376
Normal
0.3
482
Normal
0.3
786
Normal
0.3
428
Normal
0.3
286
Normal
0.3
815
Tumor
0.3
462
Normal
0.3
824
Normal
0.3
342
Normal
0.3
695
Tumor
0.3
436
Normal
0.3
912
Normal
0.3
358
Normal
0.3
446
Normal
0.3
186
Normal
0.3
128
Normal
0.3
472
Normal
0.3
615
Tumor
0.3
111
Normal
0.3
356
Normal
0.3
357
Tumor
0.3
618
Normal
0.3
483
Tumor
0.2
196
Normal
0.2
466
Normal
0.2
424
Normal
0.2
866
Normal
0.2
484
Normal
0.2
148
Normal
0.2
882
Normal
0.2
977
Tumor
0.2
868
Normal
0.2
742
Normal
0.2
142
Normal
0.2
481
Tumor
0.2
534
Normal
0.2
858
Normal
0.2
354
Normal
0.2
113
Tumor
0.2
926
Normal
0.2
124
Normal
0.2
298
Normal
0.2
864
Normal
0.2
664
Normal
0.2
162
Normal
0.2
914
Normal
0.2
716
Normal
0.2
258
Normal
0.2
432
Normal
0.2
728
Normal
0.2
878
Normal
0.2
314
Normal
0.2
332
Normal
0.2
1016
Normal
0.2
114
Normal
0.2
698
Normal
0.2
1026
Normal
0.2
277
Tumor
0.2
746
Normal
0.2
412
Normal
0.2
636
Normal
0.2
393
Tumor
0.2
341
Tumor
0.2
744
Normal
0.2
127
Tumor
0.2
778
Normal
0.2
714
Normal
0.2
884
Normal
0.2
385
Tumor
0.2
448
Normal
0.2
488
Normal
0.2
126
Normal
0.2
648
Normal
0.2
518
Normal
0.2
433
Tumor
0.2
686
Normal
0.2
396
Normal
0.2
546
Normal
0.2
1046
Normal
0.2
452
Normal
0.2
1022
Normal
0.2
172
Normal
0.2
388
Normal
0.2
423
Tumor
0.1
494
Normal
0.1
937
Tumor
0.1
568
Normal
0.1
392
Normal
0.1
554
Normal
0.1
616
Normal
0.1
362
Normal
0.1
222
Normal
0.1
146
Normal
0.1
628
Normal
0.1
218
Normal
0.1
642
Normal
0.1
344
Normal
0.1
572
Normal
0.1
966
Normal
0.1
468
Normal
0.1
756
Normal
0.1
368
Normal
0.1
528
Normal
0.1
394
Normal
0.1
272
Normal
0.1
456
Normal
0.1
968
Normal
0.1
964
Normal
0.1
421
Tumor
0.1
132
Normal
0.1
952
Normal
0.1
366
Normal
0.1
696
Normal
0.1
1014
Normal
0.1
881
Tumor
0.1
352
Normal
0.1
232
Normal
0.1
564
Normal
0.1
852
Normal
0.1
984
Normal
0.1
722
Normal
0.1
665
Tumor
0.1
364
Normal
0.1
425
Tumor
0.1
278
Normal
0.1
958
Normal
0.1
816
Normal
0.1
1045
Tumor
0.1
487
Tumor
0.1
514
Normal
0.1
136
Normal
0.1
883
Tumor
0.1
723
Tumor
0.1
261
Tumor
0.1
191
Tumor
0.1
627
Tumor
0.1
384
Normal
0.1
138
Normal
0.1
464
Normal
0.1
944
Normal
0.1
526
Normal
0.1
413
Tumor
0.1
477
Tumor
0.1
982
Normal
0.1
312
Normal
0.1
416
Normal
0.1
662
Normal
0.1
918
Normal
0.1
874
Normal
0.1
212
Normal
0.1
1032
Normal
0.1
187
Tumor
0.0
463
Tumor
0.0
434
Normal
0.0
738
Normal
0.0
635
Tumor
0.0
386
Normal
0.0
672
Normal
0.0
922
Normal
0.0
1015
Tumor
0.0
231
Tumor
0.0
574
Normal
0.0
954
Normal
0.0
228
Normal
0.0
863
Tumor
0.0
188
Normal
0.0
474
Normal
0.0
353
Tumor
0.0
516
Normal
0.0
745
Tumor
0.0
777
Tumor
0.0
365
Tumor
0.0
284
Normal
0.0
461
Tumor
0.0
515
Tumor
0.0
617
Tumor
0.0
217
Tumor
0.0
976
Normal
0.0
415
Tumor
0.0
214
Normal
0.0
666
Normal
0.0
924
Normal
0.0
147
Tumor
0.0
814
Normal
0.0
497
Tumor
0.0
755
Tumor
0.0
713
Tumor
0.0
1044
Normal
0.0
978
Normal
0.0
963
Tumor
0.0
313
Tumor
0.0
851
Tumor
0.0
267
Tumor
0.0
873
Tumor
0.0
663
Tumor
0.0
328
Normal
0.0
478
Normal
0.0
955
Tumor
0.0
195
Tumor
0.0
185
Tumor
0.0
444
Normal
0.0
813
Tumor
0.0
938
Normal
0.0
1042
Normal
0.0
538
Normal
0.0
493
Tumor
0.0
715
Tumor
-0.1
141
Tumor
-0.1
558
Normal
-0.1
1021
Tumor
-0.1
137
Tumor
-0.1
498
Normal
-0.1
1025
Tumor
-0.1
192
Normal
-0.1
916
Normal
-0.1
721
Tumor
-0.1
867
Tumor
-0.1
224
Normal
-0.1
262
Normal
-0.1
268
Normal
-0.1
131
Tumor
-0.1
492
Normal
-0.1
741
Tumor
-0.1
145
Tumor
-0.1
956
Normal
-0.1
351
Tumor
-0.1
355
Tumor
-0.1
524
Normal
-0.1
271
Tumor
-0.1
913
Tumor
-0.1
327
Tumor
-0.1
1028
Normal
-0.1
563
Tumor
-0.1
925
Tumor
-0.1
513
Tumor
-0.1
517
Tumor
-0.1
443
Tumor
-0.1
455
Tumor
-0.2
727
Tumor
-0.2
395
Tumor
-0.2
297
Tumor
-0.2
311
Tumor
-0.2
161
Tumor
-0.2
536
Normal
-0.2
641
Tumor
-0.2
211
Tumor
-0.2
975
Tumor
-0.2
915
Tumor
-0.2
533
Tumor
-0.2
857
Tumor
-0.2
361
Tumor
-0.2
917
Tumor
-0.2
391
Tumor
-0.2
817
Tumor
-0.2
427
Tumor
-0.2
671
Tumor
-0.2
451
Tumor
-0.2
923
Tumor
-0.2
125
Tumor
-0.2
213
Tumor
-0.2
951
Tumor
-0.2
383
Tumor
-0.2
911
Tumor
-0.2
387
Tumor
-0.2
447
Tumor
-0.2
221
Tumor
-0.2
367
Tumor
-0.3
571
Tumor
-0.3
1041
Tumor
-0.3
467
Tumor
-0.3
527
Tumor
-0.3
343
Tumor
-0.3
573
Tumor
-0.3
983
Tumor
-0.3
943
Tumor
-0.3
1031
Tumor
-0.3
557
Tumor
-0.3
375
Tumor
-0.3
473
Tumor
-0.3
553
Tumor
-0.3
471
Tumor
-0.3
227
Tumor
-0.3
823
Tumor
-0.3
957
Tumor
-0.3
525
Tumor
-0.3
921
Tumor
-0.3
1027
Tumor
-0.3
661
Tumor
-0.3
135
Tumor
-0.3
965
Tumor
-0.3
861
Tumor
-0.3
285
Tumor
-0.4
737
Tumor
-0.4
491
Tumor
-0.4
865
Tumor
-0.4
363
Tumor
-0.4
1043
Tumor
-0.4
331
Tumor
-0.4
283
Tumor
-0.4
523
Tumor
-0.4
257
Tumor
-0.4
967
Tumor
-0.4
697
Tumor
-0.4
537
Tumor
-0.4
724
Normal
-0.4
567
Tumor
-0.5
953
Tumor
-0.5
877
Tumor
-0.5
545
Tumor
-0.5
223
Tumor
-0.5
535
Tumor
-0.5
685
Tumor
-0.6
743
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
