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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.4
nTPM
HPA Brain:
82.9
nTPM
GTEx:
68.4
nTPM
FANTOM5:
52.4
Scaled Tags Per Million
Pig:
26.0
nTPM
Mouse:
108.6
nTPM
Allen mouse:
1.3
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
82.9
Sample id
Sample description
nTPM
Amygdala nTPM: 82.9
2814
Male, age 76, right hemisphere
185.6
2695
Female, age 67, right hemisphere
102.0
2514
Male, age 75, right hemisphere
64.6
2517
Female, age 94, left hemisphere
42.5
1987
Female, age 91, left hemisphere
19.9
Basal amygdala nTPM: 45.6
1955
Male, age 76, both hemispheres
92.6
2827
Female, age 67, right hemisphere
53.5
2110
Male, age 80, left hemisphere
38.5
2609
Male, age 75, right hemisphere
36.0
2243
Female, age 91, right hemisphere
32.4
2685
Female, age 94, left hemisphere
20.6
Central amygdala nTPM: 61.6
1905
Male, age 76, both hemispheres
117.6
2826
Female, age 94, left hemisphere
68.4
2515
Male, age 75, right hemisphere
61.9
2239
Male, age 80, left hemisphere
38.8
2701
Female, age 91, right hemisphere
21.4
Corticomedial amygdala nTPM: 50.3
2240
Male, age 76, both hemispheres
84.5
2428
Male, age 75, right hemisphere
74.6
2429
Female, age 94, left hemisphere
48.6
2535
Female, age 67, right hemisphere
41.0
2829
Male, age 80, left hemisphere
29.7
2242
Female, age 91, right hemisphere
23.4
Lateral amygdala nTPM: 65.6
2830
Female, age 67, right hemisphere
105.3
1883
Male, age 76, both hemispheres
81.7
2534
Female, age 94, left hemisphere
72.7
2516
Male, age 75, right hemisphere
70.9
2256
Male, age 80, left hemisphere
34.1
2255
Female, age 91, right hemisphere
29.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 68.4
Samples: 152
Max nTPM: 260.7
Min nTPM: 9.3
Std nTPM: 42.1
Median nTPM: 55.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
260.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
225.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
217.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
199.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
174.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
161.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
152.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
149.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
147.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
130.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
130.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
128.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
126.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
125.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
123.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
123.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
121.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
120.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
119.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
119.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
118.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
114.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
111.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
105.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
103.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
102.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
100.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
100.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
99.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
97.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
92.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
92.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
91.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
90.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
88.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
87.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
87.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
85.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
84.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
84.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
83.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
82.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
81.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
80.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
80.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
76.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
75.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
74.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
73.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
71.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
70.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
70.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
69.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
68.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
67.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
67.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
67.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
67.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
66.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
65.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
64.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
63.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
62.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
61.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
61.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
60.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
59.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
59.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
59.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
58.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
58.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
57.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
56.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
55.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
54.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
54.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
54.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
53.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
53.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
52.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
52.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
51.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
51.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
50.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
50.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
49.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
49.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
48.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
48.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
48.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
48.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
47.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
47.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
47.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
47.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
47.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
46.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
46.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
46.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
46.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
46.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
45.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
45.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
45.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
43.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
42.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
41.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
41.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
40.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
40.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
40.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
38.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
37.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
37.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
37.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
37.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
37.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
36.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
36.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
34.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
34.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
34.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
33.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
31.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
31.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
31.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
30.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
30.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
29.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
25.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
24.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
24.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
24.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
23.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
23.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
22.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
21.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
20.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
18.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
17.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
16.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
14.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
9.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
108.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 108.6
Samples: 4
Max nTPM: 121.9
Min nTPM: 97.6
Sample A
Male
97.6
Sample B
Male
103.2
Sample C
Female
121.9
Sample D
Female
111.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.