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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP2R5C is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
118.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
114.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
110.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
102.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
94.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
87.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
84.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
81.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
79.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
79.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
76.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
75.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
74.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
73.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
73.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
72.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
72.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
70.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
70.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
66.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
66.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
66.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
66.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
66.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
66.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
66.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
66.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
65.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
64.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
64.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
63.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
60.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
60.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
59.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
59.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
59.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
59.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
58.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
58.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
58.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
57.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
57.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
57.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
57.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
57.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
57.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
57.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
56.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
56.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
56.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
56.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
56.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
56.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
56.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
56.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
56.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
55.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
55.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
55.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
55.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
55.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
54.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
54.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
54.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
54.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
53.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
53.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
53.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
53.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
53.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
53.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
53.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
53.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
52.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
52.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
51.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
51.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
51.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
51.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
50.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
50.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
50.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
50.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
50.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
50.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
50.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
50.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
50.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
50.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
50.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
50.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
50.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
50.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
49.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
49.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
49.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
49.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
49.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
49.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
49.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
49.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
49.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
49.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
49.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
49.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
48.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
48.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
48.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
48.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
48.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
48.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
48.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
48.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
48.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
48.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
48.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
47.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
47.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
47.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
47.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
47.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
47.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
47.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
47.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
47.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
47.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
46.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
46.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
46.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
46.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
46.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
46.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
46.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
46.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
45.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
45.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
45.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
45.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
45.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
45.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
45.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
44.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
44.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
44.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
44.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
44.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
44.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
44.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
44.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
44.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
43.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
43.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
43.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
43.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
43.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
43.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
43.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
42.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
42.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
42.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
42.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
42.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
42.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
42.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
42.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
41.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
41.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
41.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
41.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
41.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
41.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
41.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
41.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
41.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
41.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
41.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
41.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
41.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
41.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
41.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
40.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
40.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
40.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
40.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
40.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
40.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
40.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
40.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
40.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
40.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
40.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
40.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
39.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
39.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
39.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
39.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
39.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
39.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
39.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
39.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
38.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
38.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
38.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
38.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
38.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
38.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
38.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
38.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
38.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
37.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
37.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
37.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
37.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
37.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
37.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
36.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
36.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
36.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
36.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
36.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
36.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
36.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
36.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
36.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
36.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
36.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
36.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
36.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
36.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
36.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
35.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
35.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
35.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
35.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
35.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
35.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
35.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
35.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
34.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
34.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
34.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
34.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
34.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
34.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
34.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
34.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
34.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
34.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
33.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
33.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
33.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
33.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
33.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
33.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
33.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
33.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
33.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
33.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
33.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
33.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
33.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
33.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
33.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
32.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
32.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
32.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
32.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
32.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
32.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
32.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
32.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
32.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
32.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
32.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
31.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
31.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
31.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
31.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
31.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
31.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
31.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
31.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
31.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
31.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
31.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
31.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
30.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
30.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
30.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
30.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
30.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
30.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
30.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
30.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
29.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
29.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
29.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
29.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
29.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
29.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
29.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
29.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
29.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
29.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
29.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
29.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
29.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
28.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
28.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
28.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
28.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
28.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
28.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
27.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
27.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
27.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
27.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
27.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
27.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
27.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
27.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
26.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
26.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
26.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
26.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
26.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
26.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
25.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
25.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
25.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
25.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
24.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
24.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
24.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
24.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
24.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
23.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
23.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
23.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
23.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
23.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
22.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
22.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
22.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
22.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
21.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
20.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
20.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
18.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
18.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP2R5C is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
48.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
44.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
44.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
43.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
43.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
42.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
42.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
41.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
40.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
40.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
39.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
38.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
38.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
37.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
37.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
37.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
37.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
36.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
35.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
35.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
34.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
34.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
33.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
33.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
33.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
33.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
33.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
33.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
33.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
32.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
32.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
32.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
31.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
31.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
31.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
30.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
30.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
30.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
30.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
30.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
30.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
30.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
29.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
29.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
29.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
29.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
29.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
29.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
28.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
28.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
28.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
28.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
28.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
28.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
28.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
28.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
27.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
27.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
27.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
27.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
27.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
27.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
26.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
26.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
26.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
26.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
26.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
26.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
26.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
26.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
26.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
26.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
25.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
25.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
25.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
25.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
25.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
24.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
24.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
24.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
24.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
24.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
24.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
24.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
24.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
24.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
24.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
24.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
24.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
23.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
23.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
23.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
23.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
23.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
23.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
23.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
23.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
23.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
23.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
23.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
22.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
22.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
22.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
22.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
22.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
22.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
22.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
22.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
22.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
22.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
22.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
21.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
21.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
21.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
21.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
21.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
21.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
21.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
21.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
20.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
20.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
20.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
20.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
20.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
20.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
20.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
20.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
20.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
20.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
20.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
20.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
19.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
19.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
19.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
19.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
19.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
19.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
18.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
18.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
18.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
18.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
18.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
18.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
17.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
17.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
17.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
17.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
17.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
17.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
17.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
17.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
16.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
16.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
16.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
16.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
15.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
15.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
15.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
15.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
14.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
14.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
14.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
13.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
13.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
12.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
9.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
431
Tumor
0.8
663
Tumor
0.6
112
Tumor
0.6
445
Tumor
0.5
661
Tumor
0.5
285
Tumor
0.5
375
Tumor
0.4
135
Tumor
0.4
463
Tumor
0.4
497
Tumor
0.4
277
Tumor
0.4
863
Tumor
0.4
388
Normal
0.4
126
Normal
0.4
332
Normal
0.4
422
Normal
0.4
533
Tumor
0.4
111
Normal
0.4
132
Normal
0.3
741
Tumor
0.3
451
Tumor
0.3
977
Tumor
0.3
467
Tumor
0.3
394
Normal
0.3
213
Tumor
0.3
385
Tumor
0.3
261
Tumor
0.3
433
Tumor
0.3
298
Normal
0.3
641
Tumor
0.3
146
Normal
0.3
426
Normal
0.3
192
Normal
0.3
141
Tumor
0.3
136
Normal
0.3
737
Tumor
0.3
114
Normal
0.3
125
Tumor
0.3
386
Normal
0.3
127
Tumor
0.3
278
Normal
0.3
695
Tumor
0.3
128
Normal
0.3
396
Normal
0.3
943
Tumor
0.3
434
Normal
0.3
131
Tumor
0.3
222
Normal
0.3
392
Normal
0.3
571
Tumor
0.3
297
Tumor
0.3
411
Tumor
0.3
314
Normal
0.3
271
Tumor
0.3
813
Tumor
0.3
393
Tumor
0.3
425
Tumor
0.3
877
Tumor
0.2
461
Tumor
0.2
881
Tumor
0.2
814
Normal
0.2
214
Normal
0.2
746
Normal
0.2
312
Normal
0.2
272
Normal
0.2
743
Tumor
0.2
455
Tumor
0.2
564
Normal
0.2
413
Tumor
0.2
917
Tumor
0.2
424
Normal
0.2
138
Normal
0.2
727
Tumor
0.2
362
Normal
0.2
471
Tumor
0.2
414
Normal
0.2
137
Tumor
0.2
865
Tumor
0.2
357
Tumor
0.2
196
Normal
0.2
468
Normal
0.2
311
Tumor
0.2
777
Tumor
0.2
218
Normal
0.2
195
Tumor
0.2
568
Normal
0.2
383
Tumor
0.2
446
Normal
0.2
527
Tumor
0.2
124
Normal
0.2
873
Tumor
0.2
473
Tumor
0.2
428
Normal
0.2
627
Tumor
0.2
186
Normal
0.2
685
Tumor
0.2
715
Tumor
0.2
618
Normal
0.2
616
Normal
0.2
331
Tumor
0.2
436
Normal
0.2
815
Tumor
0.2
857
Tumor
0.2
744
Normal
0.2
283
Tumor
0.2
313
Tumor
0.2
221
Tumor
0.2
1043
Tumor
0.2
944
Normal
0.2
262
Normal
0.2
574
Normal
0.2
861
Tumor
0.2
938
Normal
0.2
866
Normal
0.2
742
Normal
0.2
231
Tumor
0.2
257
Tumor
0.2
975
Tumor
0.2
724
Normal
0.2
444
Normal
0.2
921
Tumor
0.1
191
Tumor
0.1
432
Normal
0.1
353
Tumor
0.1
1044
Normal
0.1
635
Tumor
0.1
267
Tumor
0.1
427
Tumor
0.1
862
Normal
0.1
148
Normal
0.1
145
Tumor
0.1
423
Tumor
0.1
217
Tumor
0.1
344
Normal
0.1
435
Tumor
0.1
628
Normal
0.1
188
Normal
0.1
492
Normal
0.1
376
Normal
0.1
342
Normal
0.1
911
Tumor
0.1
268
Normal
0.1
171
Tumor
0.1
874
Normal
0.1
384
Normal
0.1
365
Tumor
0.1
617
Tumor
0.1
648
Normal
0.1
647
Tumor
0.1
1015
Tumor
0.1
147
Tumor
0.1
421
Tumor
0.1
557
Tumor
0.1
187
Tumor
0.1
518
Normal
0.1
366
Normal
0.1
491
Tumor
0.1
123
Tumor
0.1
452
Normal
0.1
955
Tumor
0.1
456
Normal
0.1
358
Normal
0.1
662
Normal
0.1
642
Normal
0.1
967
Tumor
0.1
914
Normal
0.1
232
Normal
0.1
498
Normal
0.1
671
Tumor
0.1
466
Normal
0.1
1016
Normal
0.1
391
Tumor
0.1
494
Normal
0.1
738
Normal
0.1
462
Normal
0.1
387
Tumor
0.1
858
Normal
0.1
162
Normal
0.0
952
Normal
0.0
361
Tumor
0.0
745
Tumor
0.0
474
Normal
0.0
493
Tumor
0.0
816
Normal
0.0
172
Normal
0.0
817
Tumor
0.0
824
Normal
0.0
573
Tumor
0.0
786
Normal
0.0
472
Normal
0.0
956
Normal
0.0
722
Normal
0.0
363
Tumor
0.0
142
Normal
0.0
1027
Tumor
0.0
818
Normal
0.0
864
Normal
0.0
823
Tumor
0.0
343
Tumor
0.0
185
Tumor
0.0
368
Normal
0.0
515
Tumor
0.0
756
Normal
0.0
778
Normal
0.0
755
Tumor
0.0
636
Normal
0.0
878
Normal
0.0
916
Normal
0.0
554
Normal
0.0
484
Normal
0.0
227
Tumor
0.0
224
Normal
0.0
867
Tumor
0.0
665
Tumor
0.0
563
Tumor
0.0
464
Normal
0.0
351
Tumor
0.0
113
Tumor
0.0
258
Normal
0.0
352
Normal
0.0
664
Normal
0.0
572
Normal
0.0
882
Normal
0.0
615
Tumor
0.0
851
Tumor
0.0
728
Normal
0.0
356
Normal
0.0
161
Tumor
0.0
926
Normal
0.0
716
Normal
0.0
286
Normal
0.0
416
Normal
0.0
852
Normal
0.0
982
Normal
0.0
785
Tumor
0.0
918
Normal
0.0
546
Normal
0.0
534
Normal
0.0
526
Normal
0.0
714
Normal
0.0
723
Tumor
0.0
698
Normal
0.0
488
Normal
-0.1
883
Tumor
-0.1
954
Normal
-0.1
721
Tumor
-0.1
1045
Tumor
-0.1
228
Normal
-0.1
686
Normal
-0.1
447
Tumor
-0.1
284
Normal
-0.1
981
Tumor
-0.1
1026
Normal
-0.1
478
Normal
-0.1
517
Tumor
-0.1
354
Normal
-0.1
915
Tumor
-0.1
211
Tumor
-0.1
223
Tumor
-0.1
976
Normal
-0.1
516
Normal
-0.1
884
Normal
-0.1
364
Normal
-0.1
328
Normal
-0.1
966
Normal
-0.1
528
Normal
-0.1
696
Normal
-0.1
968
Normal
-0.1
713
Tumor
-0.1
983
Tumor
-0.1
953
Tumor
-0.1
558
Normal
-0.1
672
Normal
-0.1
924
Normal
-0.1
553
Tumor
-0.1
443
Tumor
-0.1
523
Tumor
-0.1
483
Tumor
-0.1
341
Tumor
-0.1
1028
Normal
-0.1
538
Normal
-0.1
481
Tumor
-0.2
666
Normal
-0.2
448
Normal
-0.2
1032
Normal
-0.2
513
Tumor
-0.2
1022
Normal
-0.2
412
Normal
-0.2
465
Tumor
-0.2
1041
Tumor
-0.2
327
Tumor
-0.2
1014
Normal
-0.2
984
Normal
-0.2
965
Tumor
-0.2
525
Tumor
-0.2
482
Normal
-0.2
964
Normal
-0.2
923
Tumor
-0.2
937
Tumor
-0.2
367
Tumor
-0.2
1025
Tumor
-0.2
922
Normal
-0.2
912
Normal
-0.2
913
Tumor
-0.2
212
Normal
-0.2
514
Normal
-0.2
1042
Normal
-0.2
524
Normal
-0.2
868
Normal
-0.3
1031
Tumor
-0.3
415
Tumor
-0.3
963
Tumor
-0.3
978
Normal
-0.3
1046
Normal
-0.3
487
Tumor
-0.3
395
Tumor
-0.3
545
Tumor
-0.3
1013
Tumor
-0.3
567
Tumor
-0.3
536
Normal
-0.3
958
Normal
-0.4
355
Tumor
-0.4
1021
Tumor
-0.4
477
Tumor
-0.5
951
Tumor
-0.5
957
Tumor
-0.5
925
Tumor
-0.5
697
Tumor
-0.6
537
Tumor
-0.7
535
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
