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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
24.4
nTPM
HPA Brain:
102.8
nTPM
GTEx:
24.4
nTPM
FANTOM5:
57.2
Scaled Tags Per Million
Pig:
41.2
nTPM
Mouse:
79.7
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 91.5
2019
Male, age 18, unknown
105.6
2411
Female, age 72, unknown
101.5
1827
Male, age 72, unknown
100.9
2219
Male, age 76, both hemispheres
95.9
1830
Male, age 51, unknown
92.7
1870
Female, age 42, unknown
90.7
1833
Male, age 53, unknown
86.6
2828
Female, age 72, unknown
83.8
2666
Male, age 74, left hemisphere
82.6
2586
Male, age 75, left hemisphere
75.2
Dorsal raphe nucleus nTPM: 93.6
2016
Female, age 72, unknown
101.9
2047
Male, age 72, unknown
100.5
1828
Male, age 53, unknown
89.9
2750
Male, age 76, both hemispheres
88.2
2298
Female, age 72, unknown
87.4
Inferior colliculus nTPM: 102.8
2097
Female, age 72, unknown
110.8
1890
Male, age 53, unknown
104.2
1848
Female, age 42, unknown
102.0
2849
Male, age 72, unknown
94.3
Median raphe nucleus nTPM: 88.9
2220
Male, age 76, midline
88.9
Periaquaductal grey, anterior nTPM: 96.4
1947
Male, age 18, unknown
107.1
2502
Female, age 75, unknown
92.9
1795
Male, age 51, unknown
89.2
Periaquaductal grey, dorsal nTPM: 95.8
1840
Male, age 53, unknown
101.9
1831
Male, age 72, unknown
99.9
2464
Female, age 72, unknown
94.2
2850
Male, age 76, both hemispheres
87.3
Periaquaductal grey, lateral nTPM: 94.7
2053
Male, age 18, unknown
96.5
2272
Male, age 74, both hemispheres
95.6
2140
Male, age 76, both hemispheres
92.1
Pretectal area nTPM: 98.9
1944
Female, age 72, unknown
110.5
1816
Male, age 51, unknown
107.7
2007
Male, age 72, unknown
107.5
2273
Male, age 74, both hemispheres
102.0
2407
Male, age 75, both hemispheres
101.4
1817
Female, age 42, unknown
96.9
1815
Male, age 53, unknown
96.2
2316
Male, age 76, right hemisphere
93.0
2825
Male, age 18, unknown
92.0
2224
Female, age 72, unknown
90.8
2667
Female, age 75, unknown
90.2
Red nucleus nTPM: 91.0
1954
Female, age 42, unknown
97.1
1821
Female, age 72, unknown
96.0
2503
Female, age 72, unknown
95.9
2725
Female, age 75, unknown
95.4
2588
Male, age 74, left hemisphere
93.4
1865
Male, age 51, unknown
92.1
2823
Male, age 76, right hemisphere
90.6
2584
Male, age 75, left hemisphere
90.0
2785
Male, age 18, unknown
88.7
1904
Male, age 53, unknown
88.6
2769
Male, age 72, unknown
82.6
2227
Male, age 72, unknown
81.6
Substantia nigra nTPM: 97.4
2409
Female, age 72, unknown
118.0
1941
Male, age 53, unknown
113.3
1889
Female, age 72, unknown
99.9
2590
Female, age 75, unknown
98.2
1916
Female, age 42, unknown
97.7
2241
Male, age 72, unknown
96.9
2583
Male, age 75, right hemisphere
93.9
1851
Male, age 51, unknown
93.2
2665
Male, age 74, both hemispheres
86.0
2699
Male, age 18, unknown
76.8
Superior colliculus nTPM: 94.3
1895
Male, age 76, right hemisphere
107.7
2087
Female, age 72, unknown
102.3
2668
Female, age 75, unknown
99.8
2261
Male, age 18, unknown
98.8
2587
Male, age 74, left hemisphere
96.1
1995
Male, age 72, unknown
92.1
1913
Female, age 42, unknown
91.8
1839
Male, age 51, unknown
88.1
1796
Male, age 53, unknown
86.9
2664
Male, age 75, both hemispheres
79.3
Ventral tegmental area nTPM: 88.6
2410
Female, age 72, unknown
94.4
1942
Male, age 51, unknown
93.9
1915
Female, age 42, unknown
88.7
2218
Male, age 76, both hemispheres
87.7
2021
Male, age 53, unknown
86.9
2223
Female, age 72, unknown
80.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
24.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 24.4
Samples: 139
Max nTPM: 52.3
Min nTPM: 16.1
Std nTPM: 5.2
Median nTPM: 24.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
52.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
44.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
42.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
40.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
37.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
33.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
31.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
31.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
30.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
30.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
30.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
30.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
30.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
30.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
29.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
29.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
29.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
28.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
28.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
28.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
27.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
27.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
27.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
27.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
27.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
27.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
26.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
26.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
26.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
26.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
26.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
26.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
26.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
26.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
26.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
26.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
26.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
26.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
26.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
25.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
25.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
25.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
25.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
25.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
25.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
25.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
25.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
25.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
25.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
25.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
25.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
25.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
25.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
24.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
24.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
24.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
24.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
24.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
24.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
24.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
24.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
24.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
24.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
24.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
24.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
24.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
24.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
24.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
24.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
24.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
24.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
23.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
23.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
23.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
23.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
23.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
23.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
23.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
23.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
23.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
23.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
23.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
22.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
22.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
22.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
22.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
22.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
22.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
22.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
22.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
22.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
22.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
22.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
22.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
22.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
21.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
21.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
21.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
21.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
21.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
21.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
21.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
21.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
21.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
21.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
20.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
20.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
20.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
20.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
20.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
20.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
20.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
20.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
19.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
19.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
19.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
19.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
19.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
19.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
19.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
19.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
19.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
19.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
19.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
19.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
19.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
19.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
18.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
18.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
18.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
18.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
18.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
18.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
18.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
17.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
17.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
16.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
16.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
16.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.