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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
26.2
nTPM
HPA Brain:
104.7
nTPM
GTEx:
26.2
nTPM
FANTOM5:
71.5
Scaled Tags Per Million
Pig:
27.5
nTPM
Mouse:
60.4
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
104.7
Sample id
Sample description
nTPM
Amygdala nTPM: 97.7
2517
Female, age 94, left hemisphere
105.4
1987
Female, age 91, left hemisphere
101.1
2514
Male, age 75, right hemisphere
99.4
2814
Male, age 76, right hemisphere
91.9
2695
Female, age 67, right hemisphere
90.7
Basal amygdala nTPM: 99.4
1955
Male, age 76, both hemispheres
112.7
2685
Female, age 94, left hemisphere
106.4
2110
Male, age 80, left hemisphere
98.0
2609
Male, age 75, right hemisphere
95.3
2243
Female, age 91, right hemisphere
94.9
2827
Female, age 67, right hemisphere
89.3
Central amygdala nTPM: 94.3
1905
Male, age 76, both hemispheres
101.8
2701
Female, age 91, right hemisphere
101.8
2515
Male, age 75, right hemisphere
94.3
2239
Male, age 80, left hemisphere
93.5
2826
Female, age 94, left hemisphere
79.9
Corticomedial amygdala nTPM: 104.7
2429
Female, age 94, left hemisphere
118.6
2428
Male, age 75, right hemisphere
107.3
2829
Male, age 80, left hemisphere
104.0
2240
Male, age 76, both hemispheres
101.3
2242
Female, age 91, right hemisphere
99.1
2535
Female, age 67, right hemisphere
97.8
Lateral amygdala nTPM: 95.5
1883
Male, age 76, both hemispheres
113.3
2516
Male, age 75, right hemisphere
99.1
2255
Female, age 91, right hemisphere
95.8
2534
Female, age 94, left hemisphere
91.1
2256
Male, age 80, left hemisphere
88.9
2830
Female, age 67, right hemisphere
84.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
26.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 26.2
Samples: 152
Max nTPM: 44.0
Min nTPM: 13.9
Std nTPM: 4.7
Median nTPM: 26.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
44.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
38.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
37.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
37.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
35.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
35.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
34.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
34.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
32.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
32.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
32.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
32.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
31.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
31.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
31.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
31.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
31.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
31.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
31.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
31.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
30.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
30.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
30.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
30.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
29.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
29.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
29.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
29.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
29.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
28.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
28.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
28.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
28.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
28.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
28.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
28.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
28.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
28.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
28.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
28.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
28.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
27.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
27.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
27.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
27.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
27.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
27.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
27.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
26.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
26.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
26.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
26.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
26.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
26.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
26.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
26.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
26.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
26.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
26.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
26.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
26.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
26.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
26.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
26.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
26.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
25.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
25.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
25.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
25.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
25.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
25.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
25.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
25.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
25.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
25.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
25.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
24.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
24.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
24.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
24.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
24.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
24.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
24.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
24.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
24.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
24.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
24.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
23.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
23.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
23.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
23.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
23.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
23.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
23.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
23.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
23.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
23.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
23.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
23.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
23.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
23.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
23.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
22.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
22.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
22.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
22.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
22.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
22.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
22.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
22.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
22.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
22.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
22.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
22.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
22.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
21.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
21.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
21.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
21.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
21.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
21.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
21.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
21.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
21.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
21.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
20.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
20.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
20.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
20.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
20.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
20.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
19.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
18.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
17.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
16.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
14.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
13.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.