HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:25.4 nTPM
GTEx:21.8 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:24.0 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
2529 Female, age 94, left hemisphere 25.4
1911 Female, age 85, right hemisphere 23.2
2621 Female, age 67, right hemisphere 23.1
1898 Male, age 80, left hemisphere 22.5
2148 Female, age 91, left hemisphere 21.4
1855 Male, age 76, left hemisphere 20.2
Dentate gyrus
nTPM: 23.5
2528 Male, age 74, both hemispheres 25.7
2010 Male, age 76, both hemispheres 25.5
2530 Female, age 94, left hemisphere 24.3
2531 Female, age 67, both hemispheres 22.2
2246 Female, age 85, both hemispheres 21.8
1927 Female, age 91, both hemispheres 21.7
Entorhinal gyrus
nTPM: 25.4
2764 Male, age 80, right hemisphere 29.9
2117 Female, age 91, right hemisphere 28.6
1787 Male, age 76, left hemisphere 25.3
1938 Female, age 85, left hemisphere 24.9
2613 Female, age 94, left hemisphere 23.0
2686 Male, age 75, right hemisphere 20.5
Hippocampus, CA1
nTPM: 23.4
2749 Male, age 80, left hemisphere 28.1
2082 Female, age 91, right hemisphere 23.8
2527 Male, age 74, both hemispheres 23.7
1873 Female, age 85, both hemispheres 22.3
2045 Male, age 76, both hemispheres 19.2
Hippocampus, CA2
nTPM: 24.2
2249 Male, age 74, both hemispheres 27.0
1963 Male, age 80, left hemisphere 24.6
1940 Female, age 85, left hemisphere 24.5
2437 Female, age 94, left hemisphere 23.9
2113 Female, age 91, right hemisphere 23.5
1892 Male, age 76, both hemispheres 21.6
Hippocampus, CA3
nTPM: 22.5
2137 Male, age 80, left hemisphere 24.0
2436 Male, age 74, both hemispheres 23.8
2620 Female, age 94, left hemisphere 23.5
1867 Male, age 76, both hemispheres 22.8
1891 Female, age 85, both hemispheres 22.7
2861 Female, age 67, both hemispheres 18.4
Parahippocampal cortex
nTPM: 22.8
1990 Female, age 91, right hemisphere 26.9
2245 Female, age 91, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.8
2018 Male, age 76, both hemispheres 23.7
2532 Female, age 72, left hemisphere 23.7
2250 Female, age 67, right hemisphere 23.2
1933 Female, age 85, both hemispheres 22.7
2693 Female, age 94, both hemispheres 20.7
2692 Male, age 74, both hemispheres 19.7
2622 Female, age 67, right hemisphere 19.4
Perirhinal gyrus
nTPM: 24.9
1794 Male, age 80, right hemisphere 28.1
1847 Female, age 91, left hemisphere 25.6
2521 Female, age 94, right hemisphere 24.9
1841 Female, age 85, right hemisphere 23.9
2848 Male, age 76, right hemisphere 22.0
Subiculum
nTPM: 24.1
1977 Female, age 85, both hemispheres 28.6
1901 Male, age 80, both hemispheres 25.3
2042 Male, age 76, both hemispheres 24.2
2619 Male, age 74, both hemispheres 24.2
2438 Female, age 94, left hemisphere 21.7
2729 Female, age 91, right hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 41.4
Min nTPM: 11.3
Std nTPM: 3.9
Median nTPM: 21.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 38.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 34.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 32.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 30.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 29.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 29.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 28.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 28.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 27.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.5
FF:10153-102I9 76 years, female 31.4
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.2
Pig sample Sample description nTPM
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.8
Sample A Female 16.0
Sample B Female 12.5
Sample C Male 12.2
Sample D Male 10.8
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 19.0
Min nTPM: 11.5
Sample A Female 19.0
Sample B Female 15.2
Sample C Male 14.9
Sample D Male 11.5
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.2
Sample A Female 13.1
Sample B Female 12.5
Sample C Male 12.5
Sample D Male 10.2
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 17.6
Min nTPM: 10.6
Sample A Female 14.4
Sample B Female 10.6
Sample C Male 17.6
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 22.5
Min nTPM: 22.0
Sample A Male 22.1
Sample B Male 22.0
Sample C Female 22.1
Sample D Female 22.5
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 25.2
Min nTPM: 22.4
Sample A Male 23.5
Sample B Male 22.4
Sample C Female 25.0
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69080055 Antisense, RP_050324_01_G06, Mouse strain C57BL/6J (56 days, male) 8.0

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