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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
45.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
32.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
31.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
28.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
22.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
20.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
14.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
7.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
142.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
120.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
85.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
80.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
75.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
66.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
64.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
61.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
60.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
58.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
54.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
53.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
53.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
47.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
46.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
41.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
40.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
39.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
38.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
36.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
36.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
36.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
35.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
33.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
33.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
33.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
32.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
32.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
32.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
31.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
27.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
25.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
24.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
24.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
24.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
23.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
23.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
20.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
20.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
20.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
20.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
20.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
19.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
15.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
14.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
8.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
8.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
8.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
7.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
7.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
7.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
7.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
7.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
7.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
7.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
6.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
6.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
5.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
5.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
5.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
5.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
5.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
5.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
5.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
5.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
4.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
4.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
3.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
3.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
3.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
3.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
3.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
3.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
3.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
3.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
3.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
3.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
3.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
3.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
3.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
3.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
2.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
2.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
2.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
2.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
2.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
1.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
1.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
0.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
0.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
0.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
104.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
58.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
47.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
43.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
38.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
22.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
11.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
10.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
9.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
9.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
8.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
8.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
5.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
4.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
3.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
3.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
3.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
2.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
1.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
1.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
0.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
0.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC4 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
211.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
163.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
162.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
158.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
133.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
133.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
128.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
126.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
122.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
122.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
113.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
112.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
104.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
104.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
103.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
100.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
99.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
99.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
99.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
98.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
97.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
93.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
92.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
92.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
92.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
90.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
90.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
89.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
89.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
88.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
87.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
87.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
87.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
87.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
87.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
85.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
84.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
83.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
83.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
83.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
83.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
82.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
81.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
80.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
80.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
80.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
79.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
78.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
78.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
76.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
74.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
72.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
71.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
71.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
71.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
70.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
69.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
68.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
68.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
68.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
67.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
67.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
66.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
65.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
65.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
64.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
63.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
63.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
63.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
63.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
62.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
62.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
61.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
61.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
61.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
60.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
59.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
58.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
58.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
58.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
56.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
56.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
54.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
53.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
52.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
52.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
52.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
51.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
51.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
49.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
48.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
48.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
47.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
47.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
46.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
45.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
45.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
45.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
45.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
44.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
44.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
44.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
44.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
43.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
43.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
42.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
41.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
41.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
41.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
40.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
40.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
39.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
39.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
38.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
38.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
37.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
37.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
37.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
37.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
37.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
36.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
36.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
35.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
35.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
35.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
35.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
34.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
34.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
34.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
33.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
33.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
31.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
31.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
31.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
31.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
30.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
29.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
28.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
28.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
27.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
27.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
27.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
27.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
26.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
25.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
25.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
25.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
24.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
23.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
22.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
22.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
22.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
21.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
16.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
4.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
3.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
2.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
1.6
CPT0084590001
Normal
1.2
CPT0001270001
Normal
1.1
CPT0077320001
Normal
1.0
CPT0000660001
Normal
0.9
CPT0001180009
Tumor
0.9
CPT0092190003
Normal
0.8
CPT0017850003
Tumor
0.8
CPT0075170001
Normal
0.8
CPT0088500001
Normal
0.8
CPT0077140001
Normal
0.8
CPT0002370001
Normal
0.8
CPT0025170003
Tumor
0.7
CPT0063640001
Normal
0.7
CPT0012640003
Normal
0.6
CPT0012920003
Normal
0.6
CPT0006530001
Normal
0.6
CPT0010120001
Normal
0.6
CPT0065820001
Normal
0.6
CPT0017450001
Normal
0.6
CPT0088780001
Normal
0.6
CPT0086830003
Normal
0.6
CPT0088710001
Normal
0.6
CPT0000890001
Normal
0.6
CPT0020130001
Normal
0.5
CPT0001190001
Normal
0.5
CPT0066480003
Tumor
0.5
CPT0088570001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0012290003
Normal
0.5
CPT0001510001
Normal
0.5
CPT0013790003
Normal
0.5
CPT0078800003
Tumor
0.5
CPT0007470001
Normal
0.5
CPT0069010001
Normal
0.5
CPT0018250001
Normal
0.5
CPT0009020003
Normal
0.4
CPT0079510001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0069190001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0084560003
Tumor
0.4
CPT0086890003
Normal
0.4
CPT0077500001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0011240003
Tumor
0.4
CPT0010170001
Normal
0.4
CPT0066520001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0082010001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0088920001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0063330001
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0020020001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0079430001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0026420001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0081600003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0014450004
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0063320003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0086820003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0021240003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0063630003
Tumor
-0.5
CPT0019990003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0079180003
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0025580004
Tumor
-0.6
CPT0077490003
Tumor
-0.6
CPT0065870003
Tumor
-0.6
CPT0089020003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0088900003
Tumor
-0.6
CPT0001540009
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0012370003
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0079230003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0012550003
Tumor
-0.7
CPT0086950003
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0079410003
Tumor
-0.7
CPT0071150004
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0092160003
Tumor
-0.8
CPT0012900004
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0019130003
Tumor
-0.8
CPT0064370003
Tumor
-0.8
CPT0000780007
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0065810003
Tumor
-0.8
CPT0065750003
Tumor
-0.9
CPT0079380003
Tumor
-0.9
CPT0079480003
Tumor
-0.9
CPT0007860003
Tumor
-0.9
CPT0092290003
Tumor
-0.9
CPT0025350003
Tumor
-0.9
CPT0017410003
Tumor
-0.9
CPT0009000003
Tumor
-1.0
CPT0015810003
Tumor
-1.0
CPT0001220008
Tumor
-1.0
CPT0078830003
Tumor
-1.1
CPT0010160003
Tumor
-1.1
CPT0000870016
Tumor
-1.1
CPT0078930003
Tumor
-1.1
CPT0001260009
Tumor
-1.1
CPT0077110003
Tumor
-1.1
CPT0025880003
Tumor
-1.2
CPT0089460004
Tumor
-1.3
CPT0006630003
Tumor
-1.3
CPT0026410003
Tumor
-1.4
CPT0079270003
Tumor
-1.4
CPT0012180003
Tumor
-1.6
CPT0078990003
Tumor
-1.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.