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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.4
nTPM
HPA Brain:
21.9
nTPM
GTEx:
37.4
nTPM
FANTOM5:
13.7
Scaled Tags Per Million
Pig:
2.0
nTPM
Mouse:
0.5
nTPM
Allen mouse:
1.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.9
Sample id
Sample description
nTPM
Amygdala nTPM: 14.7
2814
Male, age 76, right hemisphere
19.3
2517
Female, age 94, left hemisphere
19.0
1987
Female, age 91, left hemisphere
15.7
2514
Male, age 75, right hemisphere
10.1
2695
Female, age 67, right hemisphere
9.1
Basal amygdala nTPM: 20.2
2685
Female, age 94, left hemisphere
24.8
2243
Female, age 91, right hemisphere
24.7
1955
Male, age 76, both hemispheres
19.6
2827
Female, age 67, right hemisphere
19.6
2609
Male, age 75, right hemisphere
18.3
2110
Male, age 80, left hemisphere
14.5
Central amygdala nTPM: 19.6
2701
Female, age 91, right hemisphere
25.3
2826
Female, age 94, left hemisphere
20.7
1905
Male, age 76, both hemispheres
18.7
2239
Male, age 80, left hemisphere
16.9
2515
Male, age 75, right hemisphere
16.3
Corticomedial amygdala nTPM: 21.9
2429
Female, age 94, left hemisphere
28.3
2535
Female, age 67, right hemisphere
27.8
2242
Female, age 91, right hemisphere
23.8
2240
Male, age 76, both hemispheres
19.1
2428
Male, age 75, right hemisphere
16.4
2829
Male, age 80, left hemisphere
16.1
Lateral amygdala nTPM: 18.7
2255
Female, age 91, right hemisphere
25.9
2256
Male, age 80, left hemisphere
22.2
2534
Female, age 94, left hemisphere
19.5
1883
Male, age 76, both hemispheres
16.5
2830
Female, age 67, right hemisphere
14.4
2516
Male, age 75, right hemisphere
13.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
37.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 37.4
Samples: 152
Max nTPM: 70.2
Min nTPM: 3.3
Std nTPM: 12.6
Median nTPM: 36.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
70.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
69.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
66.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
64.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
62.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
60.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
57.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
56.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
56.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
55.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
55.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
55.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
55.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
55.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
55.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
53.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
52.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
52.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
52.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
52.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
52.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
52.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
51.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
50.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
50.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
49.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
49.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
48.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
48.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
48.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
48.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
47.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
47.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
46.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
46.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
46.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
46.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
45.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
45.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
45.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
45.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
44.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
44.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
44.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
44.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
44.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
44.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
43.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
42.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
42.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
42.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
41.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
41.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
41.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
40.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
39.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
39.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
38.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
38.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
38.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
37.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
37.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
37.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
37.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
37.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
37.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
37.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
37.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
37.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
36.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
36.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
36.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
36.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
35.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
35.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
35.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
34.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
34.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
33.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
33.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
33.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
32.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
32.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
32.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
32.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
32.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
32.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
32.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
31.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
31.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
31.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
30.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
30.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
30.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
29.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
29.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
29.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
29.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
29.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
28.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
28.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
28.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
28.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
27.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
27.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
27.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
27.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
27.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
27.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
26.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
26.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
26.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
26.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
26.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
25.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
25.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
25.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
24.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
24.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
23.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
23.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
23.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
22.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
22.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
22.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
21.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
20.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
18.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
17.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
17.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
15.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
13.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
11.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
11.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
10.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
10.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 0.6
Samples: 4
Max nTPM: 0.8
Min nTPM: 0.0
Sample A
Male
0.6
Sample B
Male
0.0
Sample C
Female
0.8
Sample D
Female
0.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.