HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:93.0 nTPM
GTEx:39.8 nTPM
FANTOM5:167.9 Scaled Tags Per Million
Pig:156.0 nTPM
Mouse:165.9 nTPM
Allen mouse:20.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023738Antibody HPA023742
Glial cells MediumMedium
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 93.0
Sample id Sample description nTPM
Hippocampus
nTPM: 71.5
1898 Male, age 80, left hemisphere 109.1
1855 Male, age 76, left hemisphere 75.9
2621 Female, age 67, right hemisphere 71.4
2148 Female, age 91, left hemisphere 61.3
1911 Female, age 85, right hemisphere 60.2
2529 Female, age 94, left hemisphere 51.3
Dentate gyrus
nTPM: 75.7
1927 Female, age 91, both hemispheres 98.4
2010 Male, age 76, both hemispheres 85.7
2528 Male, age 74, both hemispheres 76.5
2246 Female, age 85, both hemispheres 69.3
2531 Female, age 67, both hemispheres 63.7
2530 Female, age 94, left hemisphere 60.9
Entorhinal gyrus
nTPM: 71.6
1938 Female, age 85, left hemisphere 85.6
2764 Male, age 80, right hemisphere 80.3
2613 Female, age 94, left hemisphere 79.7
1787 Male, age 76, left hemisphere 67.0
2686 Male, age 75, right hemisphere 62.9
2117 Female, age 91, right hemisphere 53.9
Hippocampus, CA1
nTPM: 88.4
2749 Male, age 80, left hemisphere 131.6
1873 Female, age 85, both hemispheres 90.6
2045 Male, age 76, both hemispheres 87.6
2527 Male, age 74, both hemispheres 71.2
2082 Female, age 91, right hemisphere 60.8
Hippocampus, CA2
nTPM: 76.6
1892 Male, age 76, both hemispheres 107.5
1963 Male, age 80, left hemisphere 94.6
2249 Male, age 74, both hemispheres 79.4
1940 Female, age 85, left hemisphere 61.1
2437 Female, age 94, left hemisphere 60.4
2113 Female, age 91, right hemisphere 56.7
Hippocampus, CA3
nTPM: 74.8
2137 Male, age 80, left hemisphere 100.8
1867 Male, age 76, both hemispheres 77.4
2436 Male, age 74, both hemispheres 76.6
2620 Female, age 94, left hemisphere 72.1
1891 Female, age 85, both hemispheres 67.3
2861 Female, age 67, both hemispheres 54.3
Parahippocampal cortex
nTPM: 74.3
1850 Male, age 80, both hemispheres 103.1
1990 Female, age 91, right hemisphere 83.2
1933 Female, age 85, both hemispheres 81.7
2693 Female, age 94, both hemispheres 79.6
2245 Female, age 91, both hemispheres 75.1
2250 Female, age 67, right hemisphere 74.7
2532 Female, age 72, left hemisphere 68.9
2018 Male, age 76, both hemispheres 62.8
2692 Male, age 74, both hemispheres 60.3
2622 Female, age 67, right hemisphere 54.1
Perirhinal gyrus
nTPM: 93.0
1847 Female, age 91, left hemisphere 117.5
1794 Male, age 80, right hemisphere 94.5
1841 Female, age 85, right hemisphere 91.4
2521 Female, age 94, right hemisphere 86.2
2848 Male, age 76, right hemisphere 75.7
Subiculum
nTPM: 64.3
1901 Male, age 80, both hemispheres 78.0
1977 Female, age 85, both hemispheres 77.9
2619 Male, age 74, both hemispheres 63.0
2729 Female, age 91, right hemisphere 58.5
2438 Female, age 94, left hemisphere 56.4
2042 Male, age 76, both hemispheres 52.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 98.0
Min nTPM: 16.2
Std nTPM: 15.7
Median nTPM: 37.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 98.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 85.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 80.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 79.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 74.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 74.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 73.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 72.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 70.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 167.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.9
FF:10169-103B7 60 years, female 224.3
FF:10153-102I9 76 years, female 111.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 156.0
Pig sample Sample description nTPM
Subiculum
nTPM: 140.6
Samples: 4

Max nTPM: 184.9
Min nTPM: 116.9
Sample A Female 184.9
Sample B Female 129.4
Sample C Male 116.9
Sample D Male 131.2
Dorsal hippocampus
nTPM: 146.3
Samples: 4

Max nTPM: 198.2
Min nTPM: 111.8
Sample A Female 198.2
Sample B Female 145.1
Sample C Male 130.2
Sample D Male 111.8
Entorhinal cortex
nTPM: 156.0
Samples: 4

Max nTPM: 186.3
Min nTPM: 135.4
Sample A Female 161.4
Sample B Female 186.3
Sample C Male 140.9
Sample D Male 135.4
Ventral hippocampus
nTPM: 128.3
Samples: 4

Max nTPM: 167.7
Min nTPM: 105.8
Sample A Female 167.7
Sample B Female 105.8
Sample C Male 107.8
Sample D Male 131.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 165.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.9
Samples: 4

Max nTPM: 184.6
Min nTPM: 152.1
Sample A Male 152.1
Sample B Male 168.3
Sample C Female 158.5
Sample D Female 184.6
Hippocampal formation
nTPM: 155.6
Samples: 4

Max nTPM: 162.8
Min nTPM: 141.1
Sample A Male 162.3
Sample B Male 156.1
Sample C Female 162.8
Sample D Female 141.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 20.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.5
67765709 Antisense, RP_040916_01_E02, Mouse strain C57BL/6J (56 days, male) 20.5

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