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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
32.8
nTPM
HPA Brain:
65.6
nTPM
GTEx:
32.8
nTPM
FANTOM5:
134.9
Scaled Tags Per Million
Pig:
107.7
nTPM
Mouse:
157.8
nTPM
Allen mouse:
22.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
65.6
Sample id
Sample description
nTPM
Amygdala nTPM: 65.6
2814
Male, age 76, right hemisphere
85.6
1987
Female, age 91, left hemisphere
70.0
2514
Male, age 75, right hemisphere
66.5
2517
Female, age 94, left hemisphere
52.9
2695
Female, age 67, right hemisphere
52.8
Basal amygdala nTPM: 57.8
2243
Female, age 91, right hemisphere
68.3
2110
Male, age 80, left hemisphere
66.3
1955
Male, age 76, both hemispheres
63.2
2685
Female, age 94, left hemisphere
55.7
2609
Male, age 75, right hemisphere
53.4
2827
Female, age 67, right hemisphere
39.9
Central amygdala nTPM: 62.0
1905
Male, age 76, both hemispheres
79.0
2239
Male, age 80, left hemisphere
63.2
2701
Female, age 91, right hemisphere
59.7
2515
Male, age 75, right hemisphere
56.9
2826
Female, age 94, left hemisphere
51.0
Corticomedial amygdala nTPM: 63.4
2829
Male, age 80, left hemisphere
74.1
2242
Female, age 91, right hemisphere
73.1
2429
Female, age 94, left hemisphere
69.8
2240
Male, age 76, both hemispheres
63.7
2428
Male, age 75, right hemisphere
58.3
2535
Female, age 67, right hemisphere
41.4
Lateral amygdala nTPM: 57.7
1883
Male, age 76, both hemispheres
93.8
2516
Male, age 75, right hemisphere
59.3
2534
Female, age 94, left hemisphere
53.3
2255
Female, age 91, right hemisphere
49.6
2256
Male, age 80, left hemisphere
46.3
2830
Female, age 67, right hemisphere
43.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
32.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 32.8
Samples: 152
Max nTPM: 67.0
Min nTPM: 14.4
Std nTPM: 9.0
Median nTPM: 30.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
67.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
66.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
57.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
54.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
54.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
52.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
51.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
51.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
47.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
46.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
46.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
46.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
45.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
44.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
43.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
43.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
43.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
42.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
42.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
42.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
42.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
41.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
41.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
41.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
40.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
40.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
40.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
40.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
40.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
39.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
39.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
38.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
38.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
38.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
38.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
38.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
37.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
37.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
37.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
37.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
36.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
36.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
36.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
36.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
35.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
35.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
35.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
35.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
35.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
35.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
34.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
34.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
34.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
34.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
34.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
34.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
33.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
33.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
32.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
32.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
32.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
32.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
32.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
31.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
31.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
31.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
31.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
31.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
31.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
31.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
30.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
30.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
30.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
30.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
30.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
30.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
30.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
30.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
30.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
30.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
30.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
29.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
29.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
29.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
29.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
29.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
29.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
29.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
29.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
29.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
29.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
28.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
28.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
28.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
28.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
28.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
28.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
28.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
27.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
27.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
27.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
27.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
27.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
27.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
27.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
27.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
27.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
27.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
27.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
27.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
26.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
26.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
26.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
26.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
26.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
25.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
25.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
25.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
24.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
24.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
24.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
24.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
24.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
24.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
24.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
24.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
23.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
23.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
23.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
22.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
21.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
21.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
20.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
20.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
20.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
18.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
18.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
18.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
16.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
16.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
157.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 157.8
Samples: 4
Max nTPM: 173.9
Min nTPM: 145.0
Sample A
Male
173.9
Sample B
Male
156.7
Sample C
Female
145.0
Sample D
Female
155.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.