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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FSCN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
174.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
66.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
55.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
30.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
19.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
18.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
9.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FSCN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
221.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
217.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
177.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
174.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
161.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
157.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
148.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
139.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
132.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
131.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
130.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
124.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
123.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
117.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
113.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
112.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
110.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
106.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
102.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
102.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
101.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
99.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
99.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
99.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
99.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
97.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
93.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
92.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
90.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
88.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
88.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
87.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
86.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
86.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
85.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
84.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
84.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
82.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
81.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
79.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
79.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
79.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
78.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
77.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
76.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
75.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
74.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
73.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
73.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
73.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
73.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
72.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
71.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
71.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
71.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
71.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
70.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
69.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
69.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
69.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
67.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
66.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
66.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
66.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
65.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
65.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
65.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
65.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
65.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
64.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
63.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
63.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
63.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
63.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
63.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
63.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
63.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
63.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
62.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
61.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
61.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
61.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
60.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
60.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
60.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
59.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
59.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
59.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
59.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
58.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
58.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
56.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
56.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
56.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
56.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
56.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
56.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
56.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
56.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
55.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
55.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
54.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
54.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
54.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
54.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
53.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
53.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
53.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
53.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
52.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
52.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
51.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
51.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
50.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
50.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
49.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
49.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
49.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
48.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
48.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
48.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
48.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
48.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
48.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
48.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
47.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
47.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
47.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
47.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
47.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
47.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
47.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
46.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
46.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
46.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
46.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
46.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
46.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
46.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
45.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
45.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
45.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
45.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
45.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
44.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
44.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
44.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
44.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
44.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
44.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
44.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
43.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
43.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
43.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
42.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
42.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
42.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
42.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
41.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
41.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
41.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
40.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
40.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
39.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
39.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
38.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
38.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
38.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
38.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
38.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
37.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
37.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
37.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
37.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
36.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
36.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
36.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
36.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
36.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
35.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
35.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
35.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
35.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
35.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
35.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
35.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
34.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
34.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
34.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
33.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
33.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
33.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
33.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
33.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
32.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
32.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
32.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
29.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
29.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
29.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
28.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
28.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
28.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
28.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
27.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
27.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
26.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
25.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
24.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
23.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
23.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
22.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
22.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
22.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
21.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
20.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
14.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
4.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
4.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
0.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FSCN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
256.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
180.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
167.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
144.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
136.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
117.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
94.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
93.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
87.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
80.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
79.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
78.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
76.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
68.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
67.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
66.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
62.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
56.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
52.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
50.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
50.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
49.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
45.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
45.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
43.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
39.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
38.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
38.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
37.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
36.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
36.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
35.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
32.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
23.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FSCN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
133.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
124.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
121.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
93.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
88.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
81.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
81.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
75.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
75.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
75.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
71.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
70.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
63.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
60.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
58.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
57.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
57.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
56.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
55.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
52.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
52.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
51.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
50.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
48.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
48.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
45.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
45.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
45.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
45.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
42.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
41.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
41.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
40.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
40.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
40.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
39.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
38.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
38.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
37.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
36.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
36.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
35.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
34.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
34.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
34.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
33.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
33.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
33.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
29.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
27.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
27.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
26.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
25.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
25.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
25.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
24.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
21.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
20.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
8.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
8.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
6.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
6.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
5.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
5.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
4.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
3.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
3.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
1.7
CPT0076330003
Tumor
1.3
CPT0001340003
Tumor
1.3
CPT0088760003
Tumor
1.1
CPT0077490003
Tumor
1.0
CPT0011410003
Tumor
1.0
CPT0088630003
Tumor
0.9
CPT0015910003
Tumor
0.9
CPT0021240003
Tumor
0.9
CPT0066470004
Tumor
0.9
CPT0092730003
Tumor
0.8
CPT0000780007
Tumor
0.8
CPT0088900003
Tumor
0.8
CPT0081880003
Tumor
0.8
CPT0015810003
Tumor
0.8
CPT0025350003
Tumor
0.7
CPT0012080003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0092790003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0065930003
Tumor
0.7
CPT0088480003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0081600003
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0025230003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0081990003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0063320003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0025170003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0065870003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0079480003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0084590001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0001270001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0006440003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0012920003
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0009020003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0012670003
Tumor
-0.3
CPT0078940001
Normal
-0.3
CPT0002350011
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0025050003
Tumor
-0.3
CPT0020020001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0092310003
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0089040001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0024670003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0078800003
Tumor
-0.5
CPT0026420001
Normal
-0.5
CPT0092160003
Tumor
-0.5
CPT0087050003
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0015730003
Tumor
-0.6
CPT0006730001
Normal
-0.6
CPT0088780001
Normal
-0.6
CPT0065450001
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0012180003
Tumor
-0.8
CPT0014450004
Tumor
-0.8
CPT0001180009
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
