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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM131 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
33.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
33.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
28.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
22.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
21.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
19.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
19.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
15.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
15.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
15.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
15.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
14.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
14.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
13.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
13.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
12.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
12.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
11.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
11.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
10.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
10.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
10.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
10.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
10.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
9.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
9.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
8.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
8.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
8.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
8.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
8.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
7.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
7.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
7.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
7.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
6.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
3.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
3.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM131 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
231
Samples
Sample
Description
TPM
DO23509
0 years, male, NA, stage:3, dead, 780 days
17.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
17.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
16.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
15.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
14.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
12.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
12.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
11.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
11.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
10.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
10.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
10.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
10.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
9.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
9.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
9.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
9.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
8.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
8.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
8.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
7.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
7.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
7.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
3.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
131
Tumor
1.1
743
Tumor
0.9
641
Tumor
0.8
567
Tumor
0.6
473
Tumor
0.6
527
Tumor
0.6
745
Tumor
0.6
877
Tumor
0.5
351
Tumor
0.5
161
Tumor
0.5
642
Normal
0.5
463
Tumor
0.5
357
Tumor
0.5
113
Tumor
0.5
533
Tumor
0.5
331
Tumor
0.5
537
Tumor
0.5
171
Tumor
0.5
368
Normal
0.5
191
Tumor
0.5
636
Normal
0.4
573
Tumor
0.4
943
Tumor
0.4
865
Tumor
0.4
327
Tumor
0.4
965
Tumor
0.4
393
Tumor
0.4
147
Tumor
0.4
277
Tumor
0.4
737
Tumor
0.4
365
Tumor
0.4
355
Tumor
0.4
221
Tumor
0.4
467
Tumor
0.4
517
Tumor
0.4
953
Tumor
0.4
135
Tumor
0.4
951
Tumor
0.4
1027
Tumor
0.4
523
Tumor
0.3
343
Tumor
0.3
671
Tumor
0.3
557
Tumor
0.3
983
Tumor
0.3
464
Normal
0.3
615
Tumor
0.3
727
Tumor
0.3
227
Tumor
0.3
125
Tumor
0.3
367
Tumor
0.3
863
Tumor
0.3
817
Tumor
0.3
628
Normal
0.3
363
Tumor
0.3
944
Normal
0.3
913
Tumor
0.3
881
Tumor
0.3
724
Normal
0.3
452
Normal
0.3
456
Normal
0.3
445
Tumor
0.3
285
Tumor
0.3
618
Normal
0.3
777
Tumor
0.3
635
Tumor
0.3
663
Tumor
0.3
515
Tumor
0.3
127
Tumor
0.3
435
Tumor
0.3
257
Tumor
0.3
424
Normal
0.3
361
Tumor
0.3
411
Tumor
0.3
666
Normal
0.3
258
Normal
0.3
525
Tumor
0.3
187
Tumor
0.3
217
Tumor
0.3
813
Tumor
0.3
497
Tumor
0.3
923
Tumor
0.2
627
Tumor
0.2
648
Normal
0.2
427
Tumor
0.2
1013
Tumor
0.2
451
Tumor
0.2
388
Normal
0.2
112
Tumor
0.2
395
Tumor
0.2
425
Tumor
0.2
111
Normal
0.2
268
Normal
0.2
114
Normal
0.2
383
Tumor
0.2
617
Tumor
0.2
313
Tumor
0.2
698
Normal
0.2
723
Tumor
0.2
123
Tumor
0.2
185
Tumor
0.2
545
Tumor
0.2
126
Normal
0.2
468
Normal
0.2
428
Normal
0.2
956
Normal
0.2
883
Tumor
0.2
713
Tumor
0.2
433
Tumor
0.2
172
Normal
0.2
814
Normal
0.2
422
Normal
0.2
1021
Tumor
0.2
874
Normal
0.2
616
Normal
0.2
414
Normal
0.2
162
Normal
0.2
267
Tumor
0.1
446
Normal
0.1
232
Normal
0.1
186
Normal
0.1
396
Normal
0.1
431
Tumor
0.1
857
Tumor
0.1
955
Tumor
0.1
952
Normal
0.1
925
Tumor
0.1
423
Tumor
0.1
387
Tumor
0.1
481
Tumor
0.1
1031
Tumor
0.1
272
Normal
0.1
1025
Tumor
0.1
223
Tumor
0.1
864
Normal
0.1
448
Normal
0.1
482
Normal
0.1
148
Normal
0.1
672
Normal
0.1
647
Tumor
0.1
957
Tumor
0.1
188
Normal
0.1
443
Tumor
0.1
815
Tumor
0.1
385
Tumor
0.1
571
Tumor
0.1
662
Normal
0.1
455
Tumor
0.1
785
Tumor
0.1
262
Normal
0.1
132
Normal
0.1
341
Tumor
0.1
922
Normal
0.1
554
Normal
0.1
866
Normal
0.1
861
Tumor
0.1
664
Normal
0.1
786
Normal
0.1
271
Tumor
0.1
222
Normal
0.1
392
Normal
0.1
924
Normal
0.1
465
Tumor
0.1
353
Tumor
0.1
526
Normal
0.0
421
Tumor
0.0
461
Tumor
0.0
851
Tumor
0.0
918
Normal
0.0
967
Tumor
0.0
514
Normal
0.0
665
Tumor
0.0
213
Tumor
0.0
366
Normal
0.0
311
Tumor
0.0
391
Tumor
0.0
128
Normal
0.0
823
Tumor
0.0
375
Tumor
0.0
462
Normal
0.0
868
Normal
0.0
394
Normal
0.0
386
Normal
0.0
218
Normal
0.0
568
Normal
0.0
852
Normal
0.0
426
Normal
0.0
434
Normal
0.0
1026
Normal
0.0
493
Tumor
0.0
914
Normal
0.0
483
Tumor
0.0
518
Normal
0.0
524
Normal
0.0
528
Normal
0.0
756
Normal
0.0
474
Normal
0.0
574
Normal
0.0
513
Tumor
0.0
697
Tumor
0.0
917
Tumor
0.0
816
Normal
0.0
964
Normal
0.0
553
Tumor
0.0
1046
Normal
0.0
564
Normal
0.0
415
Tumor
0.0
436
Normal
0.0
938
Normal
0.0
1043
Tumor
0.0
364
Normal
0.0
297
Tumor
0.0
342
Normal
0.0
124
Normal
0.0
145
Tumor
0.0
911
Tumor
0.0
444
Normal
0.0
136
Normal
0.0
196
Normal
0.0
741
Tumor
0.0
412
Normal
-0.1
746
Normal
-0.1
1044
Normal
-0.1
873
Tumor
-0.1
141
Tumor
-0.1
137
Tumor
-0.1
231
Tumor
-0.1
558
Normal
-0.1
867
Tumor
-0.1
328
Normal
-0.1
1045
Tumor
-0.1
487
Tumor
-0.1
1042
Normal
-0.1
916
Normal
-0.1
358
Normal
-0.1
416
Normal
-0.1
447
Tumor
-0.1
954
Normal
-0.1
958
Normal
-0.1
362
Normal
-0.1
975
Tumor
-0.1
728
Normal
-0.1
912
Normal
-0.1
477
Tumor
-0.1
1032
Normal
-0.1
778
Normal
-0.1
494
Normal
-0.1
278
Normal
-0.1
195
Tumor
-0.1
963
Tumor
-0.1
212
Normal
-0.1
695
Tumor
-0.1
484
Normal
-0.1
882
Normal
-0.1
715
Tumor
-0.1
878
Normal
-0.1
286
Normal
-0.1
283
Tumor
-0.1
546
Normal
-0.1
738
Normal
-0.1
926
Normal
-0.1
491
Tumor
-0.1
966
Normal
-0.1
661
Tumor
-0.1
413
Tumor
-0.1
915
Tumor
-0.1
968
Normal
-0.1
478
Normal
-0.1
535
Tumor
-0.1
344
Normal
-0.1
976
Normal
-0.1
696
Normal
-0.1
314
Normal
-0.1
352
Normal
-0.1
534
Normal
-0.1
862
Normal
-0.1
1028
Normal
-0.1
298
Normal
-0.1
466
Normal
-0.1
937
Tumor
-0.1
538
Normal
-0.2
356
Normal
-0.2
824
Normal
-0.2
146
Normal
-0.2
1041
Tumor
-0.2
1022
Normal
-0.2
192
Normal
-0.2
312
Normal
-0.2
858
Normal
-0.2
1015
Tumor
-0.2
472
Normal
-0.2
432
Normal
-0.2
332
Normal
-0.2
1016
Normal
-0.2
516
Normal
-0.2
498
Normal
-0.2
138
Normal
-0.2
376
Normal
-0.2
142
Normal
-0.2
572
Normal
-0.2
228
Normal
-0.2
563
Tumor
-0.2
742
Normal
-0.2
884
Normal
-0.2
744
Normal
-0.2
921
Tumor
-0.2
982
Normal
-0.2
536
Normal
-0.2
214
Normal
-0.2
722
Normal
-0.2
284
Normal
-0.2
818
Normal
-0.2
261
Tumor
-0.2
471
Tumor
-0.2
492
Normal
-0.2
721
Tumor
-0.2
354
Normal
-0.3
978
Normal
-0.3
984
Normal
-0.3
224
Normal
-0.3
686
Normal
-0.3
488
Normal
-0.3
685
Tumor
-0.3
1014
Normal
-0.3
977
Tumor
-0.4
755
Tumor
-0.4
714
Normal
-0.4
211
Tumor
-0.4
384
Normal
-0.4
716
Normal
-0.5
981
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
