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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
530.9
nTPM
HPA Brain:
552.0
nTPM
GTEx:
530.9
nTPM
FANTOM5:
500.3
Scaled Tags Per Million
Pig:
495.6
nTPM
Mouse:
690.0
nTPM
Allen mouse:
1.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
552.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 357.5
2411
Female, age 72, unknown
446.5
1870
Female, age 42, unknown
387.4
2586
Male, age 75, left hemisphere
384.8
1827
Male, age 72, unknown
372.9
2828
Female, age 72, unknown
363.8
2019
Male, age 18, unknown
337.2
1833
Male, age 53, unknown
332.7
2666
Male, age 74, left hemisphere
323.8
2219
Male, age 76, both hemispheres
322.6
1830
Male, age 51, unknown
303.0
Dorsal raphe nucleus nTPM: 552.0
2298
Female, age 72, unknown
736.3
2047
Male, age 72, unknown
612.3
1828
Male, age 53, unknown
521.2
2016
Female, age 72, unknown
468.6
2750
Male, age 76, both hemispheres
421.3
Inferior colliculus nTPM: 467.2
2097
Female, age 72, unknown
620.4
1890
Male, age 53, unknown
529.6
1848
Female, age 42, unknown
393.5
2849
Male, age 72, unknown
325.3
Median raphe nucleus nTPM: 505.8
2220
Male, age 76, midline
505.8
Periaquaductal grey, anterior nTPM: 411.3
1947
Male, age 18, unknown
437.7
1795
Male, age 51, unknown
432.0
2502
Female, age 75, unknown
364.1
Periaquaductal grey, dorsal nTPM: 394.7
2850
Male, age 76, both hemispheres
467.3
1840
Male, age 53, unknown
405.7
2464
Female, age 72, unknown
362.6
1831
Male, age 72, unknown
343.2
Periaquaductal grey, lateral nTPM: 408.1
2272
Male, age 74, both hemispheres
470.2
2140
Male, age 76, both hemispheres
395.6
2053
Male, age 18, unknown
358.6
Pretectal area nTPM: 395.9
2667
Female, age 75, unknown
509.1
2273
Male, age 74, both hemispheres
507.5
2224
Female, age 72, unknown
482.7
1817
Female, age 42, unknown
418.4
1944
Female, age 72, unknown
408.6
1816
Male, age 51, unknown
388.8
2825
Male, age 18, unknown
369.4
2007
Male, age 72, unknown
367.0
2316
Male, age 76, right hemisphere
319.8
1815
Male, age 53, unknown
310.7
2407
Male, age 75, both hemispheres
273.1
Red nucleus nTPM: 363.6
1821
Female, age 72, unknown
478.6
2725
Female, age 75, unknown
427.7
1954
Female, age 42, unknown
420.8
2227
Male, age 72, unknown
391.6
2769
Male, age 72, unknown
389.2
2503
Female, age 72, unknown
374.2
1865
Male, age 51, unknown
358.1
1904
Male, age 53, unknown
355.1
2823
Male, age 76, right hemisphere
336.0
2785
Male, age 18, unknown
334.1
2584
Male, age 75, left hemisphere
251.3
2588
Male, age 74, left hemisphere
247.1
Substantia nigra nTPM: 456.4
1916
Female, age 42, unknown
686.6
1941
Male, age 53, unknown
543.0
2699
Male, age 18, unknown
500.9
1851
Male, age 51, unknown
499.3
2241
Male, age 72, unknown
499.2
1889
Female, age 72, unknown
442.2
2409
Female, age 72, unknown
378.3
2665
Male, age 74, both hemispheres
364.7
2590
Female, age 75, unknown
326.4
2583
Male, age 75, right hemisphere
323.3
Superior colliculus nTPM: 346.1
2087
Female, age 72, unknown
393.4
2261
Male, age 18, unknown
383.6
1796
Male, age 53, unknown
374.4
1995
Male, age 72, unknown
364.3
1913
Female, age 42, unknown
355.8
2587
Male, age 74, left hemisphere
337.9
2668
Female, age 75, unknown
336.6
1839
Male, age 51, unknown
327.4
2664
Male, age 75, both hemispheres
305.4
1895
Male, age 76, right hemisphere
281.7
Ventral tegmental area nTPM: 464.1
1915
Female, age 42, unknown
532.1
1942
Male, age 51, unknown
480.4
2410
Female, age 72, unknown
467.7
2223
Female, age 72, unknown
458.1
2218
Male, age 76, both hemispheres
444.8
2021
Male, age 53, unknown
401.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
530.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 530.9
Samples: 139
Max nTPM: 1253.5
Min nTPM: 244.0
Std nTPM: 161.6
Median nTPM: 511.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1253.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1055.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1050.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
936.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
918.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
823.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
812.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
805.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
758.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
747.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
746.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
741.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
737.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
714.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
708.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
708.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
696.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
686.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
684.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
675.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
671.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
665.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
661.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
660.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
654.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
652.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
651.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
643.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
642.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
640.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
633.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
621.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
620.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
615.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
615.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
614.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
611.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
610.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
603.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
601.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
601.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
593.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
592.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
590.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
589.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
580.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
580.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
579.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
578.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
567.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
567.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
566.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
562.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
561.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
559.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
559.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
548.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
548.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
543.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
542.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
539.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
538.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
535.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
530.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
526.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
523.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
522.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
516.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
515.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
511.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
506.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
503.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
503.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
499.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
499.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
498.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
496.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
496.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
495.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
494.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
492.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
476.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
469.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
464.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
462.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
461.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
459.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
452.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
452.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
450.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
450.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
449.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
448.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
447.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
444.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
443.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
441.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
434.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
430.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
429.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
426.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
426.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
422.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
418.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
409.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
408.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
402.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
401.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
397.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
392.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
389.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
385.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
384.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
381.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
380.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
380.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
379.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
377.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
375.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
373.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
372.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
370.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
358.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
357.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
350.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
348.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
347.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
346.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
344.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
338.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
320.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
316.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
312.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
311.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
301.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
300.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
289.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
274.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
244.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
690.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 690.0
Samples: 4
Max nTPM: 727.4
Min nTPM: 650.7
Sample A
Male
727.4
Sample B
Male
663.3
Sample C
Female
650.7
Sample D
Female
718.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.