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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
719.2
nTPM
GTEx:
719.2
nTPM
FANTOM5:
583.7
Scaled Tags Per Million
Pig:
560.5
nTPM
Mouse:
3635.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
719.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 719.2
Samples: 105
Max nTPM: 1268.2
Min nTPM: 347.2
Std nTPM: 199.1
Median nTPM:
218_1
71 years, female
1268.2
386_1
76 years, male
1230.9
379_1
60 years, male
1209.3
173_1
67 years, male
1198.0
308_1
70 years, female
1091.7
163_1
78 years, male
1051.1
6_1
73 years, female
1049.6
452_1
88 years, female
1041.4
375_1
74 years, female
975.7
317_1
60 years, male
965.3
295_1
61 years, female
965.2
137_1
83 years, male
953.7
17_1
71 years, male
951.2
145_1
84 years, male
948.8
384_1
83 years, male
947.9
321_1
62 years, female
933.0
447_1
81 years, male
929.0
351_1
91 years, male
922.1
4_1
88 years, female
916.0
347_1
72 years, male
904.3
353_1
82 years, female
900.6
319_1
81 years, male
898.8
307_1
66 years, female
894.3
120_1
70 years, female
891.1
237_1
82 years, male
870.8
377_1
82 years, female
863.7
322_1
76 years, male
858.3
316_1
62 years, male
849.5
506_1
65 years, male
839.8
2_1
77 years, female
816.4
18_1
88 years, male
812.0
503_1
68 years, male
809.9
99_1
64 years, male
804.2
177_1
74 years, male
803.5
318_1
68 years, male
803.5
376_1
75 years, female
803.1
501_1
88 years, male
790.1
264_1
73 years, female
782.2
243_1
75 years, male
781.6
495_1
57 years, female
778.5
288_1
66 years, female
778.2
42_1
85 years, male
771.6
406_1
79 years, male
764.7
354_1
81 years, female
751.6
315_1
62 years, female
732.4
189_1
76 years, male
724.4
35_1
74 years, female
721.5
291_1
76 years, male
719.3
518_1
75 years, female
707.8
490_1
67 years, female
699.2
320_1
89 years, female
696.3
491_1
89 years, female
691.4
404_1
82 years, female
689.5
350_1
84 years, female
687.9
311_1
78 years, male
681.5
389_1
86 years, female
680.0
349_1
83 years, male
676.9
394_1
75 years, female
675.8
172_1
72 years, female
665.9
41_1
94 years, female
665.8
314_1
67 years, male
644.0
126_1
63 years, male
638.1
117_1
61 years, male
638.0
348_1
84 years, male
628.5
413_1
59 years, female
623.0
115_1
83 years, male
619.1
414_1
84 years, female
618.9
356_1
87 years, female
617.7
119_1
70 years, female
615.3
139_1
64 years, female
613.2
246_1
77 years, male
606.4
43_1
64 years, female
602.8
526_1
61 years, male
600.6
335_1
73 years, female
596.1
251_1
78 years, male
595.1
425_1
59 years, female
594.9
405_1
91 years, male
592.2
396_1
62 years, male
584.8
517_1
88 years, male
571.5
313_1
79 years, female
562.0
153_1
70 years, female
559.0
254_1
77 years, female
556.5
292_1
71 years, male
551.1
89_1
63 years, male
546.5
109_1
81 years, female
545.4
324_1
76 years, male
543.5
468_1
89 years, male
541.6
355_1
70 years, female
537.1
265_1
87 years, male
531.1
293_1
68 years, female
528.1
142_1
61 years, female
504.7
480_1
63 years, male
500.6
266_1
85 years, male
488.1
352_1
62 years, male
484.7
81_1
67 years, male
477.0
286_1
68 years, female
464.1
499_1
55 years, female
452.1
466_1
57 years, female
451.8
415_1
77 years, female
443.9
217_1
76 years, male
426.8
149_1
88 years, male
406.1
9_1
66 years, female
397.8
162_1
79 years, female
391.0
229_1
69 years, female
388.4
32_1
67 years, male
347.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.