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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
635.1
nTPM
HPA Brain:
415.8
nTPM
GTEx:
635.1
nTPM
FANTOM5:
553.7
Scaled Tags Per Million
Pig:
272.6
nTPM
Mouse:
849.9
nTPM
Allen mouse:
5.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
415.8
Sample id
Sample description
nTPM
Amygdala nTPM: 408.0
1987
Female, age 91, left hemisphere
498.1
2514
Male, age 75, right hemisphere
458.6
2517
Female, age 94, left hemisphere
392.0
2814
Male, age 76, right hemisphere
356.7
2695
Female, age 67, right hemisphere
334.8
Basal amygdala nTPM: 394.7
2110
Male, age 80, left hemisphere
540.1
2609
Male, age 75, right hemisphere
503.6
2243
Female, age 91, right hemisphere
449.4
2685
Female, age 94, left hemisphere
349.3
1955
Male, age 76, both hemispheres
326.0
2827
Female, age 67, right hemisphere
199.5
Central amygdala nTPM: 391.3
2239
Male, age 80, left hemisphere
464.3
2515
Male, age 75, right hemisphere
445.9
2826
Female, age 94, left hemisphere
357.6
1905
Male, age 76, both hemispheres
346.5
2701
Female, age 91, right hemisphere
342.3
Corticomedial amygdala nTPM: 415.8
2829
Male, age 80, left hemisphere
544.0
2242
Female, age 91, right hemisphere
503.2
2428
Male, age 75, right hemisphere
469.2
2429
Female, age 94, left hemisphere
432.5
2240
Male, age 76, both hemispheres
295.2
2535
Female, age 67, right hemisphere
250.6
Lateral amygdala nTPM: 352.1
2516
Male, age 75, right hemisphere
455.7
1883
Male, age 76, both hemispheres
376.9
2534
Female, age 94, left hemisphere
370.9
2256
Male, age 80, left hemisphere
369.3
2255
Female, age 91, right hemisphere
351.5
2830
Female, age 67, right hemisphere
188.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
635.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 635.1
Samples: 152
Max nTPM: 1193.4
Min nTPM: 246.3
Std nTPM: 182.7
Median nTPM: 623.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1193.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1121.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1067.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1031.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1028.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
1017.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1013.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
994.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
948.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
904.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
893.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
891.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
885.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
882.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
872.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
869.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
863.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
855.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
851.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
848.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
842.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
839.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
831.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
825.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
812.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
807.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
800.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
799.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
798.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
796.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
788.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
787.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
782.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
782.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
781.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
775.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
774.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
766.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
764.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
757.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
755.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
753.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
741.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
731.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
710.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
706.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
699.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
685.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
683.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
683.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
680.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
680.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
678.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
677.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
669.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
669.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
664.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
659.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
658.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
658.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
655.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
654.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
653.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
651.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
649.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
648.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
643.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
642.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
642.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
637.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
633.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
630.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
629.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
629.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
629.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
626.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
621.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
619.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
619.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
615.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
614.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
606.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
605.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
604.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
601.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
600.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
597.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
596.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
595.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
593.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
588.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
585.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
584.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
583.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
577.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
577.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
576.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
575.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
575.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
573.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
569.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
568.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
568.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
562.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
558.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
551.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
546.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
540.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
527.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
524.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
516.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
508.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
508.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
507.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
506.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
490.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
489.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
488.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
486.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
486.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
482.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
479.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
472.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
471.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
469.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
468.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
464.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
461.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
457.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
452.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
450.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
436.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
432.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
415.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
409.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
406.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
403.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
392.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
388.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
381.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
377.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
369.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
363.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
360.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
336.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
335.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
331.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
302.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
297.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
284.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
282.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
246.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
849.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 849.9
Samples: 4
Max nTPM: 884.8
Min nTPM: 830.2
Sample A
Male
884.8
Sample B
Male
846.7
Sample C
Female
830.2
Sample D
Female
837.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.