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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGLL is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
185.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
151.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
131.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
124.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
122.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
110.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
110.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
109.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
108.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
101.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
88.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
86.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
85.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
85.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
84.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
84.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
81.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
81.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
80.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
74.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
74.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
73.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
72.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
72.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
71.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
69.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
68.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
67.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
67.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
67.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
65.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
65.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
64.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
64.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
63.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
63.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
63.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
62.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
62.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
62.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
61.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
61.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
60.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
59.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
58.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
58.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
56.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
55.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
54.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
54.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
53.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
53.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
53.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
53.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
53.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
53.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
51.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
51.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
51.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
51.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
50.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
50.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
50.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
50.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
49.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
49.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
49.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
49.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
49.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
48.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
48.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
47.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
47.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
47.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
47.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
47.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
46.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
46.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
46.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
46.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
46.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
46.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
46.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
45.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
45.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
45.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
45.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
45.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
44.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
44.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
44.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
44.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
43.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
43.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
43.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
42.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
42.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
41.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
41.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
41.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
41.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
41.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
40.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
40.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
40.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
40.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
39.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
39.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
39.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
39.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
39.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
39.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
38.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
38.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
38.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
38.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
38.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
37.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
37.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
37.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
36.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
36.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
36.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
35.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
35.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
35.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
35.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
35.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
34.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
34.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
34.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
34.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
33.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
33.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
33.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
33.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
33.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
32.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
32.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
32.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
32.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
32.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
31.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
31.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
31.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
31.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
31.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
31.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
30.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
30.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
30.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
30.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
30.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
30.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
29.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
29.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
29.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
29.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
29.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
28.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
28.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
28.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
27.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
27.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
27.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
27.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
27.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
27.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
26.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
26.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
26.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
26.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
26.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
26.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
26.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
25.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
25.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
25.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
25.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
25.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
25.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
25.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
25.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
24.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
24.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
24.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
24.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
24.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
23.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
23.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
23.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
23.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
23.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
23.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
23.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
22.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
22.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
21.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
20.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
20.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
20.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
20.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
20.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
20.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
20.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
19.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
19.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
19.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
19.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
19.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
19.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
19.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
18.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
18.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
18.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
18.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
18.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
18.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
18.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
18.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
17.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
17.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
17.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
16.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
16.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
16.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
15.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
15.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
15.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
14.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
14.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
14.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
14.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
13.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
13.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
13.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
12.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
12.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
12.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
12.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
10.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
10.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
10.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
9.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
7.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
6.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
3.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGLL is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.8
Number of samples
231
Samples
Sample
Description
TPM
DO45305
0 years, male, NA, stage:4, alive, 300 days
167.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
120.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
113.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
81.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
78.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
70.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
70.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
64.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
63.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
60.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
60.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
59.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
57.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
55.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
55.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
54.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
52.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
51.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
50.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
49.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
47.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
47.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
46.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
46.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
45.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
45.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
44.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
44.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
43.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
42.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
42.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
42.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
41.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
41.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
41.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
41.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
41.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
41.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
40.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
40.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
40.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
40.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
39.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
39.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
39.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
38.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
38.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
37.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
37.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
36.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
36.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
36.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
36.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
35.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
34.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
34.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
34.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
34.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
34.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
34.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
33.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
33.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
32.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
32.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
32.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
31.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
31.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
31.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
31.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
30.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
30.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
30.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
30.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
30.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
30.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
30.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
29.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
29.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
29.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
29.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
28.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
28.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
28.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
28.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
28.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
27.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
27.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
27.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
27.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
27.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
27.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
27.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
27.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
27.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
26.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
26.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
26.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
26.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
26.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
26.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
26.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
25.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
25.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
25.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
25.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
25.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
25.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
24.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
23.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
23.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
23.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
23.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
23.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
22.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
22.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
22.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
22.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
21.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
21.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
20.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
20.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
20.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
19.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
18.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
18.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
17.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
17.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
17.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
17.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
17.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
16.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
16.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
16.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
15.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
13.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
13.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
12.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
12.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
9.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
7.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
5.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
3.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
3.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
3.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
2.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
1.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
663
Tumor
1.2
111
Normal
1.1
523
Tumor
0.9
358
Normal
0.9
648
Normal
0.9
664
Normal
0.9
912
Normal
0.8
136
Normal
0.8
666
Normal
0.8
114
Normal
0.8
448
Normal
0.8
723
Tumor
0.8
487
Tumor
0.8
222
Normal
0.8
627
Tumor
0.8
464
Normal
0.8
746
Normal
0.8
436
Normal
0.7
278
Normal
0.7
866
Normal
0.7
616
Normal
0.7
868
Normal
0.7
214
Normal
0.7
135
Tumor
0.7
414
Normal
0.7
914
Normal
0.7
452
Normal
0.7
314
Normal
0.6
421
Tumor
0.6
952
Normal
0.6
428
Normal
0.6
617
Tumor
0.6
172
Normal
0.6
564
Normal
0.6
162
Normal
0.6
426
Normal
0.6
728
Normal
0.6
466
Normal
0.6
392
Normal
0.6
1022
Normal
0.6
816
Normal
0.6
955
Tumor
0.6
422
Normal
0.6
258
Normal
0.6
394
Normal
0.6
862
Normal
0.6
738
Normal
0.6
128
Normal
0.6
424
Normal
0.6
864
Normal
0.5
456
Normal
0.5
148
Normal
0.5
515
Tumor
0.5
286
Normal
0.5
636
Normal
0.5
126
Normal
0.5
312
Normal
0.5
232
Normal
0.5
138
Normal
0.5
386
Normal
0.5
218
Normal
0.5
125
Tumor
0.5
368
Normal
0.5
745
Tumor
0.5
968
Normal
0.5
786
Normal
0.5
921
Tumor
0.5
223
Tumor
0.5
628
Normal
0.5
388
Normal
0.5
662
Normal
0.5
132
Normal
0.5
272
Normal
0.5
188
Normal
0.5
228
Normal
0.5
298
Normal
0.5
982
Normal
0.5
572
Normal
0.5
956
Normal
0.5
396
Normal
0.5
722
Normal
0.5
642
Normal
0.5
284
Normal
0.4
714
Normal
0.4
1043
Tumor
0.4
187
Tumor
0.4
824
Normal
0.4
518
Normal
0.4
778
Normal
0.4
574
Normal
0.4
713
Tumor
0.4
618
Normal
0.4
354
Normal
0.4
445
Tumor
0.4
462
Normal
0.4
756
Normal
0.4
813
Tumor
0.4
364
Normal
0.4
124
Normal
0.4
1044
Normal
0.4
567
Tumor
0.4
432
Normal
0.4
416
Normal
0.4
884
Normal
0.4
742
Normal
0.4
858
Normal
0.4
376
Normal
0.4
558
Normal
0.4
362
Normal
0.4
874
Normal
0.4
1026
Normal
0.4
468
Normal
0.4
716
Normal
0.4
488
Normal
0.4
882
Normal
0.4
938
Normal
0.4
186
Normal
0.4
474
Normal
0.4
926
Normal
0.4
494
Normal
0.3
737
Tumor
0.3
327
Tumor
0.3
913
Tumor
0.3
262
Normal
0.3
698
Normal
0.3
1014
Normal
0.3
142
Normal
0.3
446
Normal
0.3
528
Normal
0.3
958
Normal
0.3
366
Normal
0.3
497
Tumor
0.3
434
Normal
0.3
343
Tumor
0.3
482
Normal
0.3
472
Normal
0.3
342
Normal
0.3
978
Normal
0.3
365
Tumor
0.3
526
Normal
0.3
568
Normal
0.3
924
Normal
0.3
271
Tumor
0.3
356
Normal
0.3
196
Normal
0.3
1016
Normal
0.2
918
Normal
0.2
412
Normal
0.2
878
Normal
0.2
976
Normal
0.2
332
Normal
0.2
554
Normal
0.2
1028
Normal
0.2
1046
Normal
0.2
785
Tumor
0.2
721
Tumor
0.2
463
Tumor
0.2
423
Tumor
0.2
777
Tumor
0.2
484
Normal
0.2
852
Normal
0.2
146
Normal
0.2
944
Normal
0.2
818
Normal
0.2
224
Normal
0.2
344
Normal
0.2
328
Normal
0.2
571
Tumor
0.2
257
Tumor
0.2
672
Normal
0.2
384
Normal
0.2
268
Normal
0.2
615
Tumor
0.2
984
Normal
0.2
1032
Normal
0.2
137
Tumor
0.2
191
Tumor
0.2
966
Normal
0.2
514
Normal
0.2
817
Tumor
0.2
352
Normal
0.1
686
Normal
0.1
823
Tumor
0.1
647
Tumor
0.1
395
Tumor
0.1
353
Tumor
0.1
922
Normal
0.1
964
Normal
0.1
857
Tumor
0.1
1042
Normal
0.1
444
Normal
0.1
481
Tumor
0.1
695
Tumor
0.1
534
Normal
0.1
461
Tumor
0.1
546
Normal
0.1
563
Tumor
0.1
145
Tumor
0.1
696
Normal
0.1
213
Tumor
0.1
916
Normal
0.0
983
Tumor
0.0
524
Normal
0.0
141
Tumor
0.0
267
Tumor
0.0
217
Tumor
0.0
447
Tumor
0.0
147
Tumor
0.0
212
Normal
0.0
573
Tumor
0.0
1045
Tumor
0.0
443
Tumor
0.0
192
Normal
0.0
536
Normal
0.0
1027
Tumor
0.0
277
Tumor
0.0
517
Tumor
0.0
641
Tumor
0.0
455
Tumor
0.0
393
Tumor
0.0
851
Tumor
-0.1
465
Tumor
-0.1
863
Tumor
-0.1
425
Tumor
-0.1
195
Tumor
-0.1
527
Tumor
-0.1
954
Normal
-0.1
755
Tumor
-0.1
361
Tumor
-0.1
516
Normal
-0.2
383
Tumor
-0.2
478
Normal
-0.2
957
Tumor
-0.2
814
Normal
-0.2
943
Tumor
-0.2
744
Normal
-0.2
363
Tumor
-0.2
297
Tumor
-0.3
953
Tumor
-0.3
492
Normal
-0.3
545
Tumor
-0.3
513
Tumor
-0.3
1031
Tumor
-0.3
375
Tumor
-0.3
357
Tumor
-0.3
113
Tumor
-0.3
697
Tumor
-0.3
471
Tumor
-0.3
161
Tumor
-0.3
433
Tumor
-0.4
221
Tumor
-0.4
341
Tumor
-0.4
498
Normal
-0.4
1025
Tumor
-0.4
311
Tumor
-0.4
975
Tumor
-0.4
557
Tumor
-0.5
923
Tumor
-0.5
727
Tumor
-0.5
313
Tumor
-0.5
491
Tumor
-0.5
553
Tumor
-0.5
415
Tumor
-0.5
867
Tumor
-0.5
411
Tumor
-0.5
391
Tumor
-0.5
635
Tumor
-0.5
427
Tumor
-0.6
525
Tumor
-0.6
671
Tumor
-0.6
477
Tumor
-0.6
533
Tumor
-0.6
538
Normal
-0.6
112
Tumor
-0.6
431
Tumor
-0.6
873
Tumor
-0.6
715
Tumor
-0.6
493
Tumor
-0.7
355
Tumor
-0.7
185
Tumor
-0.7
917
Tumor
-0.7
261
Tumor
-0.8
937
Tumor
-0.8
231
Tumor
-0.8
1013
Tumor
-0.8
535
Tumor
-0.8
883
Tumor
-0.8
665
Tumor
-0.8
467
Tumor
-0.8
127
Tumor
-0.8
387
Tumor
-0.8
1021
Tumor
-0.8
283
Tumor
-0.8
537
Tumor
-0.9
963
Tumor
-0.9
385
Tumor
-0.9
881
Tumor
-0.9
331
Tumor
-0.9
977
Tumor
-0.9
483
Tumor
-0.9
171
Tumor
-0.9
131
Tumor
-1.0
367
Tumor
-1.0
451
Tumor
-1.0
981
Tumor
-1.0
227
Tumor
-1.0
661
Tumor
-1.0
815
Tumor
-1.0
877
Tumor
-1.0
865
Tumor
-1.0
965
Tumor
-1.1
1041
Tumor
-1.1
911
Tumor
-1.1
861
Tumor
-1.1
1015
Tumor
-1.1
413
Tumor
-1.2
285
Tumor
-1.2
351
Tumor
-1.2
123
Tumor
-1.2
967
Tumor
-1.2
724
Normal
-1.3
685
Tumor
-1.4
741
Tumor
-1.4
951
Tumor
-1.4
915
Tumor
-1.4
473
Tumor
-1.4
211
Tumor
-1.5
435
Tumor
-1.5
743
Tumor
-1.6
925
Tumor
-1.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
