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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBXW11 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
54.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
52.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
41.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
32.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
30.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
28.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
28.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
27.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
26.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
25.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
23.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
23.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
23.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
21.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
20.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
20.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
20.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
20.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
19.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
18.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
18.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
18.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
18.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
18.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
17.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
17.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
17.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
16.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
16.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
16.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
16.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
15.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
14.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
14.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
13.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
13.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
13.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
13.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
12.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
11.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
11.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
11.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
9.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
9.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
8.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
8.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBXW11 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
38.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
32.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
28.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
24.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
22.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
21.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
20.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
19.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
18.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
18.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
18.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
17.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
17.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
17.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
17.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
16.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
16.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
15.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
15.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
15.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
15.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
14.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
14.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
14.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
14.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
14.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
14.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
13.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
13.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
13.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
12.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
12.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
12.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
12.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
11.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
11.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
10.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
9.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
9.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
9.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
9.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
8.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
8.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
8.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
5.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
5.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
4.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
3.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
3.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
777
Tumor
1.4
473
Tumor
1.0
865
Tumor
0.7
147
Tumor
0.6
353
Tumor
0.5
523
Tumor
0.5
515
Tumor
0.5
745
Tumor
0.5
427
Tumor
0.5
863
Tumor
0.4
395
Tumor
0.4
341
Tumor
0.4
112
Tumor
0.4
737
Tumor
0.4
471
Tumor
0.4
664
Normal
0.4
425
Tumor
0.4
191
Tumor
0.4
913
Tumor
0.4
671
Tumor
0.4
1026
Normal
0.4
268
Normal
0.4
463
Tumor
0.4
272
Normal
0.4
213
Tumor
0.4
351
Tumor
0.3
663
Tumor
0.3
223
Tumor
0.3
443
Tumor
0.3
1021
Tumor
0.3
332
Normal
0.3
145
Tumor
0.3
312
Normal
0.3
455
Tumor
0.3
573
Tumor
0.3
135
Tumor
0.3
161
Tumor
0.3
314
Normal
0.3
222
Normal
0.3
527
Tumor
0.3
533
Tumor
0.3
211
Tumor
0.3
618
Normal
0.3
285
Tumor
0.3
461
Tumor
0.3
1031
Tumor
0.3
452
Normal
0.3
258
Normal
0.3
428
Normal
0.3
188
Normal
0.3
221
Tumor
0.3
617
Tumor
0.3
436
Normal
0.3
355
Tumor
0.3
616
Normal
0.3
331
Tumor
0.3
648
Normal
0.3
187
Tumor
0.3
192
Normal
0.3
446
Normal
0.3
466
Normal
0.3
444
Normal
0.3
647
Tumor
0.3
467
Tumor
0.2
262
Normal
0.2
877
Tumor
0.2
415
Tumor
0.2
131
Tumor
0.2
185
Tumor
0.2
636
Normal
0.2
343
Tumor
0.2
665
Tumor
0.2
196
Normal
0.2
126
Normal
0.2
186
Normal
0.2
424
Normal
0.2
278
Normal
0.2
217
Tumor
0.2
1043
Tumor
0.2
814
Normal
0.2
571
Tumor
0.2
283
Tumor
0.2
297
Tumor
0.2
965
Tumor
0.2
277
Tumor
0.2
721
Tumor
0.2
218
Normal
0.2
813
Tumor
0.2
697
Tumor
0.2
557
Tumor
0.2
426
Normal
0.2
823
Tumor
0.2
558
Normal
0.2
572
Normal
0.2
298
Normal
0.2
422
Normal
0.2
114
Normal
0.2
685
Tumor
0.2
384
Normal
0.2
756
Normal
0.2
497
Tumor
0.2
468
Normal
0.2
857
Tumor
0.2
162
Normal
0.2
862
Normal
0.2
128
Normal
0.2
564
Normal
0.2
975
Tumor
0.2
376
Normal
0.2
123
Tumor
0.2
432
Normal
0.2
421
Tumor
0.2
113
Tumor
0.2
535
Tumor
0.2
563
Tumor
0.2
433
Tumor
0.1
967
Tumor
0.1
963
Tumor
0.1
627
Tumor
0.1
976
Normal
0.1
423
Tumor
0.1
267
Tumor
0.1
1025
Tumor
0.1
127
Tumor
0.1
148
Normal
0.1
141
Tumor
0.1
537
Tumor
0.1
478
Normal
0.1
232
Normal
0.1
568
Normal
0.1
861
Tumor
0.1
327
Tumor
0.1
311
Tumor
0.1
456
Normal
0.1
394
Normal
0.1
362
Normal
0.1
464
Normal
0.1
755
Tumor
0.1
132
Normal
0.1
966
Normal
0.1
472
Normal
0.1
642
Normal
0.1
125
Tumor
0.1
545
Tumor
0.1
964
Normal
0.1
494
Normal
0.1
195
Tumor
0.1
435
Tumor
0.1
868
Normal
0.1
393
Tumor
0.1
641
Tumor
0.1
943
Tumor
0.1
525
Tumor
0.1
445
Tumor
0.1
137
Tumor
0.1
1045
Tumor
0.1
713
Tumor
0.1
662
Normal
0.1
313
Tumor
0.1
955
Tumor
0.1
925
Tumor
0.1
172
Normal
0.1
414
Normal
0.1
817
Tumor
0.1
392
Normal
0.1
413
Tumor
0.1
383
Tumor
0.0
491
Tumor
0.0
261
Tumor
0.0
517
Tumor
0.0
1016
Normal
0.0
937
Tumor
0.0
434
Normal
0.0
412
Normal
0.0
474
Normal
0.0
661
Tumor
0.0
574
Normal
0.0
111
Normal
0.0
271
Tumor
0.0
778
Normal
0.0
724
Normal
0.0
1042
Normal
0.0
146
Normal
0.0
921
Tumor
0.0
1041
Tumor
0.0
352
Normal
0.0
484
Normal
0.0
365
Tumor
0.0
386
Normal
0.0
465
Tumor
0.0
1027
Tumor
0.0
628
Normal
0.0
924
Normal
0.0
212
Normal
0.0
447
Tumor
0.0
722
Normal
0.0
968
Normal
0.0
364
Normal
0.0
391
Tumor
0.0
214
Normal
0.0
492
Normal
0.0
615
Tumor
0.0
488
Normal
0.0
361
Tumor
0.0
448
Normal
0.0
342
Normal
0.0
388
Normal
0.0
922
Normal
0.0
923
Tumor
0.0
538
Normal
0.0
982
Normal
0.0
1032
Normal
0.0
672
Normal
0.0
786
Normal
0.0
396
Normal
0.0
536
Normal
0.0
513
Tumor
0.0
138
Normal
0.0
344
Normal
0.0
957
Tumor
0.0
368
Normal
0.0
1014
Normal
0.0
858
Normal
0.0
1046
Normal
0.0
231
Tumor
0.0
358
Normal
0.0
567
Tumor
0.0
487
Tumor
0.0
136
Normal
0.0
785
Tumor
0.0
483
Tumor
0.0
816
Normal
0.0
385
Tumor
0.0
938
Normal
0.0
686
Normal
0.0
518
Normal
0.0
915
Tumor
0.0
451
Tumor
0.0
715
Tumor
0.0
698
Normal
-0.1
363
Tumor
-0.1
375
Tumor
-0.1
257
Tumor
-0.1
514
Normal
-0.1
354
Normal
-0.1
124
Normal
-0.1
284
Normal
-0.1
864
Normal
-0.1
881
Tumor
-0.1
142
Normal
-0.1
958
Normal
-0.1
481
Tumor
-0.1
978
Normal
-0.1
224
Normal
-0.1
951
Tumor
-0.1
916
Normal
-0.1
416
Normal
-0.1
873
Tumor
-0.1
171
Tumor
-0.1
714
Normal
-0.1
328
Normal
-0.1
482
Normal
-0.1
866
Normal
-0.1
286
Normal
-0.1
366
Normal
-0.1
874
Normal
-0.1
926
Normal
-0.1
356
Normal
-0.1
387
Tumor
-0.1
746
Normal
-0.1
883
Tumor
-0.1
546
Normal
-0.1
727
Tumor
-0.1
917
Tumor
-0.1
696
Normal
-0.1
912
Normal
-0.1
851
Tumor
-0.1
228
Normal
-0.1
477
Tumor
-0.1
953
Tumor
-0.1
716
Normal
-0.1
1028
Normal
-0.1
498
Normal
-0.1
911
Tumor
-0.1
516
Normal
-0.1
728
Normal
-0.1
956
Normal
-0.1
824
Normal
-0.1
534
Normal
-0.1
882
Normal
-0.1
984
Normal
-0.1
1044
Normal
-0.1
635
Tumor
-0.1
431
Tumor
-0.1
743
Tumor
-0.1
742
Normal
-0.1
553
Tumor
-0.1
954
Normal
-0.2
852
Normal
-0.2
462
Normal
-0.2
952
Normal
-0.2
554
Normal
-0.2
528
Normal
-0.2
666
Normal
-0.2
493
Tumor
-0.2
878
Normal
-0.2
524
Normal
-0.2
1022
Normal
-0.2
1013
Tumor
-0.2
981
Tumor
-0.2
818
Normal
-0.2
944
Normal
-0.2
867
Tumor
-0.2
526
Normal
-0.2
411
Tumor
-0.2
741
Tumor
-0.2
918
Normal
-0.2
227
Tumor
-0.2
723
Tumor
-0.3
695
Tumor
-0.3
738
Normal
-0.3
884
Normal
-0.3
914
Normal
-0.3
744
Normal
-0.3
357
Tumor
-0.3
1015
Tumor
-0.3
367
Tumor
-0.3
977
Tumor
-0.3
983
Tumor
-0.4
815
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
