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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCF3 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
110.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
68.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
58.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
58.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
56.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
54.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
50.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
48.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
48.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
42.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
41.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
38.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
37.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
36.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
31.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
29.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
29.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
29.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
28.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
26.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
20.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
19.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCF3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
58.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
51.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
48.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
40.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
38.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
38.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
37.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
36.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
35.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
33.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
32.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
32.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
31.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
30.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
29.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
29.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
28.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
28.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
28.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
28.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
27.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
27.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
26.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
25.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
25.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
25.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
25.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
24.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
24.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
23.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
23.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
23.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
23.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
22.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
21.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
20.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
20.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
20.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
18.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
17.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCF3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
71.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
53.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
45.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
30.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
29.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
29.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
28.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
28.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
27.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
23.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
22.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
21.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
21.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCF3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
99.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
77.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
76.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
74.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
74.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
72.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
69.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
68.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
67.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
67.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
64.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
63.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
62.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
60.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
59.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
57.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
57.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
57.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
55.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
55.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
53.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
53.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
53.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
52.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
50.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
50.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
50.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
48.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
48.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
48.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
47.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
46.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
46.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
46.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
45.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
44.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
44.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
43.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
43.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
42.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
42.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
41.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
41.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
40.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
40.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
40.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
40.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
39.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
39.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
39.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
39.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
38.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
38.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
37.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
37.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
37.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
37.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
36.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
36.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
36.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
35.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
35.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
35.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
35.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
35.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
35.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
35.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
34.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
34.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
34.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
33.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
33.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
32.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
32.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
32.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
31.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
31.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
31.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
31.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
30.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
30.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
30.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
29.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
29.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
28.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
27.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
27.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
27.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
26.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
25.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
24.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
24.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
23.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
23.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
17.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
13.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
6.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0007320003
Tumor
2.2
CPT0079410003
Tumor
2.1
CPT0023350003
Tumor
2.0
CPT0011410003
Tumor
1.6
CPT0078530001
Normal
1.4
CPT0081880003
Tumor
1.4
CPT0079180003
Tumor
1.2
CPT0078510003
Tumor
1.1
CPT0088550004
Tumor
1.0
CPT0007860003
Tumor
0.9
CPT0011240003
Tumor
0.8
CPT0017850003
Tumor
0.7
CPT0006630003
Tumor
0.7
CPT0088500001
Normal
0.6
CPT0066480003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0006440003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0092730003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0010120001
Normal
0.4
CPT0001340003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0002350011
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0088570001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0079510001
Normal
0.2
CPT0019990003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0000890001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0065820001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0086950003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0078670001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0081620001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0001540009
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0086360003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0024670003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0014450004
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0019130003
Tumor
-0.4
CPT0078840001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0092800003
Normal
-0.5
CPT0089020003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0077140001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0076330003
Tumor
-0.6
CPT0020020001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0002270011
Tumor
-0.6
CPT0076350001
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0001260009
Tumor
-0.7
CPT0066430001
Normal
-0.7
CPT0077110003
Tumor
-0.7
CPT0001270001
Normal
-0.7
CPT0065810003
Tumor
-0.7
CPT0026420001
Normal
-0.8
CPT0088970003
Tumor
-1.0
CPT0069000003
Tumor
-1.0
CPT0087040003
Tumor
-1.1
CPT0065870003
Tumor
-1.2
CPT0092160003
Tumor
-1.4
CPT0069010001
Normal
-1.4
CPT0007470001
Normal
-1.8
CPT0010160003
Tumor
-2.0
CPT0086820003
Tumor
-2.1
CPT0086830003
Normal
-2.1
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0079380003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0014160003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0086030003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0001230001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0085670003
Tumor
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
