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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL31 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1632.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6697.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5049.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4774.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4565.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4384.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4291.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3995.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3951.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3927.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3722.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
3709.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3656.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3557.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3549.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3502.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3467.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3466.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3451.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
3430.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3257.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3247.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
3158.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3111.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2979.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2927.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2901.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2846.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2844.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2833.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2818.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2795.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2765.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2730.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2715.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2712.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2664.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2654.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2648.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2635.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2632.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2594.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2593.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2592.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2575.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2566.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2547.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2523.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2511.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2487.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2487.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2433.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2431.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2372.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2339.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2323.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2319.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2317.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2317.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
2309.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2302.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2265.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2250.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2248.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2242.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2223.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2222.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2221.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2211.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2206.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
2193.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2134.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
2131.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2097.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2092.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2079.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2076.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2073.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
2046.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2039.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2028.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2016.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1998.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1997.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
1991.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1978.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1974.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1964.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1963.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1955.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1950.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1941.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1908.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1905.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1901.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1901.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1900.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1895.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1889.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1885.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1877.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1861.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1845.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1840.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1834.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1818.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1805.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1799.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1795.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1794.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1788.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1782.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1762.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1757.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1753.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1750.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1745.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1744.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1740.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1736.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1734.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1733.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1732.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1727.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1727.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1724.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1724.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1721.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1717.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1710.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1708.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1703.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1697.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1691.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1691.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1659.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1652.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1649.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1641.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1630.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1627.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1617.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1610.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1609.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1605.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1605.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1600.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1598.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1591.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1591.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1581.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1578.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1571.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1567.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1564.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1564.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1556.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1554.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1553.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1537.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1519.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1511.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1501.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1499.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1496.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1483.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1483.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1481.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1476.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1471.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1464.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1463.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1462.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1458.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1454.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1451.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1446.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1445.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1442.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1433.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1426.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1422.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1421.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1412.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1399.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1398.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1387.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1387.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1387.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1382.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1380.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1373.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1372.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1371.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1369.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1367.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1365.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1362.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1353.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1352.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1350.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1341.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1340.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1330.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1326.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1318.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1314.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1313.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1309.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1306.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1300.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1296.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1296.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1282.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1279.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1276.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1276.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1273.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1271.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1270.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1268.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1264.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1248.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1247.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1244.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1238.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1238.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1235.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1233.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1226.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1225.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1224.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1212.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1212.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1200.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1198.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1198.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1198.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1197.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1194.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1190.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1190.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1181.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1178.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1177.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1176.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1167.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1166.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1166.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1165.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1164.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1162.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1155.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1150.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1147.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1142.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1139.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1127.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1126.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1122.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1122.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1119.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1111.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1111.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1106.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1102.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1095.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1092.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1087.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1080.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1074.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1072.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1071.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1069.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1067.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1060.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1058.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1054.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1050.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1048.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1045.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1045.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1043.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1042.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1037.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1035.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1027.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1026.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1026.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1025.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1021.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1019.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1019.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1018.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1015.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1002.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1002.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1000.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
995.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
980.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
972.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
967.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
964.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
954.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
954.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
952.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
950.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
948.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
944.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
940.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
939.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
932.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
932.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
930.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
917.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
912.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
903.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
898.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
891.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
880.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
870.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
868.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
865.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
864.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
862.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
860.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
854.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
848.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
844.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
827.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
827.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
816.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
812.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
812.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
809.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
801.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
787.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
787.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
785.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
785.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
782.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
781.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
751.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
746.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
743.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
734.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
717.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
695.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
695.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
694.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
689.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
681.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
678.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
668.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
656.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
654.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
636.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
634.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
605.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
581.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
540.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
509.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL31 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1064.4
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
5126.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
3992.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
3489.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
2576.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
2457.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2446.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
2406.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
2402.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
2322.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
2227.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
2199.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
2188.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2139.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
2079.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
2072.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
1987.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
1914.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
1849.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
1790.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
1753.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1738.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
1712.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
1682.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
1676.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
1649.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
1625.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1621.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
1602.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1592.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
1584.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
1584.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1577.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
1566.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
1556.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1540.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
1524.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
1521.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
1504.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1499.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
1488.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
1443.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
1433.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1423.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1420.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
1409.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
1404.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
1399.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
1399.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
1394.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
1386.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
1372.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
1368.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
1354.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1344.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
1330.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
1306.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
1305.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
1295.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
1291.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1290.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1284.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
1283.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1262.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
1259.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1255.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
1253.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1252.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1232.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
1229.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
1228.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
1222.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
1219.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
1211.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1182.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
1182.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
1164.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1156.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1154.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1152.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
1145.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1138.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
1129.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
1129.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
1124.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
1121.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
1110.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
1108.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
1072.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
1071.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1057.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
1052.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1049.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1045.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
1041.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
1023.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1022.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
1020.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
1019.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
1015.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
1015.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1005.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
1004.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
1003.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1002.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
996.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
994.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
993.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
990.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
971.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
962.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
958.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
957.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
941.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
935.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
932.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
924.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
918.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
901.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
901.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
900.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
893.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
881.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
881.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
880.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
879.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
878.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
875.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
871.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
870.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
863.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
860.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
857.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
852.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
851.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
848.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
841.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
837.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
836.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
834.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
833.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
827.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
821.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
799.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
785.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
783.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
783.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
771.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
757.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
755.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
751.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
747.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
744.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
744.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
743.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
741.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
734.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
734.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
733.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
726.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
723.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
721.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
713.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
704.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
703.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
703.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
693.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
689.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
687.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
683.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
680.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
673.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
673.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
667.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
667.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
664.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
655.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
648.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
641.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
634.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
621.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
619.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
619.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
614.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
610.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
608.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
606.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
602.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
595.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
595.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
592.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
591.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
579.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
573.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
570.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
570.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
568.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
566.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
565.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
564.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
563.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
558.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
556.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
553.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
546.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
538.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
536.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
524.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
524.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
518.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
518.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
516.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
512.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
510.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
503.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
499.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
486.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
482.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
482.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
480.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
463.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
442.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
438.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
425.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
412.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
382.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
382.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
381.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
378.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
375.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
364.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
318.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.6
685
Tumor
0.5
367
Tumor
0.5
285
Tumor
0.4
113
Tumor
0.4
393
Tumor
0.4
327
Tumor
0.4
481
Tumor
0.4
918
Normal
0.4
353
Tumor
0.3
395
Tumor
0.3
1021
Tumor
0.3
467
Tumor
0.3
331
Tumor
0.3
661
Tumor
0.3
131
Tumor
0.3
965
Tumor
0.3
537
Tumor
0.3
743
Tumor
0.3
922
Normal
0.3
135
Tumor
0.3
617
Tumor
0.3
983
Tumor
0.3
413
Tumor
0.3
964
Normal
0.3
636
Normal
0.3
387
Tumor
0.3
937
Tumor
0.3
966
Normal
0.3
724
Normal
0.3
267
Tumor
0.3
1025
Tumor
0.2
851
Tumor
0.2
223
Tumor
0.2
195
Tumor
0.2
958
Normal
0.2
385
Tumor
0.2
745
Tumor
0.2
955
Tumor
0.2
567
Tumor
0.2
944
Normal
0.2
232
Normal
0.2
865
Tumor
0.2
1027
Tumor
0.2
443
Tumor
0.2
376
Normal
0.2
672
Normal
0.2
815
Tumor
0.2
392
Normal
0.2
671
Tumor
0.2
777
Tumor
0.2
564
Normal
0.2
314
Normal
0.2
258
Normal
0.2
938
Normal
0.2
696
Normal
0.2
817
Tumor
0.2
412
Normal
0.2
523
Tumor
0.2
227
Tumor
0.2
662
Normal
0.2
191
Tumor
0.2
864
Normal
0.2
926
Normal
0.2
984
Normal
0.2
1044
Normal
0.2
212
Normal
0.2
362
Normal
0.2
414
Normal
0.2
968
Normal
0.2
572
Normal
0.2
666
Normal
0.2
257
Tumor
0.2
426
Normal
0.2
951
Tumor
0.2
422
Normal
0.2
923
Tumor
0.2
436
Normal
0.2
462
Normal
0.2
721
Tumor
0.2
568
Normal
0.2
332
Normal
0.2
214
Normal
0.2
497
Tumor
0.2
978
Normal
0.2
558
Normal
0.2
368
Normal
0.2
123
Tumor
0.1
446
Normal
0.1
518
Normal
0.1
664
Normal
0.1
1015
Tumor
0.1
1016
Normal
0.1
114
Normal
0.1
866
Normal
0.1
778
Normal
0.1
785
Tumor
0.1
957
Tumor
0.1
137
Tumor
0.1
628
Normal
0.1
278
Normal
0.1
128
Normal
0.1
648
Normal
0.1
384
Normal
0.1
142
Normal
0.1
448
Normal
0.1
222
Normal
0.1
517
Tumor
0.1
221
Tumor
0.1
528
Normal
0.1
952
Normal
0.1
218
Normal
0.1
665
Tumor
0.1
976
Normal
0.1
394
Normal
0.1
618
Normal
0.1
641
Tumor
0.1
466
Normal
0.1
356
Normal
0.1
1014
Normal
0.1
536
Normal
0.1
824
Normal
0.1
136
Normal
0.1
727
Tumor
0.1
756
Normal
0.1
473
Tumor
0.1
474
Normal
0.1
713
Tumor
0.1
715
Tumor
0.1
963
Tumor
0.1
358
Normal
0.1
912
Normal
0.1
714
Normal
0.1
388
Normal
0.1
1042
Normal
0.1
574
Normal
0.1
1026
Normal
0.1
112
Tumor
0.1
755
Tumor
0.1
217
Tumor
0.1
982
Normal
0.1
228
Normal
0.1
873
Tumor
0.1
231
Tumor
0.1
284
Normal
0.1
722
Normal
0.1
471
Tumor
0.1
635
Tumor
0.1
213
Tumor
0.1
451
Tumor
0.1
916
Normal
0.1
196
Normal
0.1
981
Tumor
0.1
272
Normal
0.1
852
Normal
0.1
277
Tumor
0.1
286
Normal
0.1
535
Tumor
0.1
862
Normal
0.1
1046
Normal
0.1
571
Tumor
0.1
386
Normal
0.1
716
Normal
0.1
573
Tumor
0.1
615
Tumor
0.1
312
Normal
0.1
728
Normal
0.1
396
Normal
0.1
738
Normal
0.1
464
Normal
0.1
298
Normal
0.1
1032
Normal
0.1
262
Normal
0.1
746
Normal
0.1
882
Normal
0.1
172
Normal
0.1
723
Tumor
0.1
546
Normal
0.1
187
Tumor
0.1
1031
Tumor
0.1
431
Tumor
0.1
663
Tumor
0.1
271
Tumor
0.1
1022
Normal
0.1
126
Normal
0.1
924
Normal
0.1
642
Normal
0.1
111
Normal
0.1
868
Normal
0.1
132
Normal
0.1
261
Tumor
0.1
127
Tumor
0.1
482
Normal
0.1
421
Tumor
0.1
366
Normal
0.1
162
Normal
0.1
452
Normal
0.1
975
Tumor
0.1
186
Normal
0.1
954
Normal
0.1
742
Normal
0.1
411
Tumor
0.1
1028
Normal
0.0
913
Tumor
0.0
432
Normal
0.0
351
Tumor
0.0
516
Normal
0.0
375
Tumor
0.0
967
Tumor
0.0
472
Normal
0.0
737
Tumor
0.0
515
Tumor
0.0
468
Normal
0.0
434
Normal
0.0
463
Tumor
0.0
534
Normal
0.0
697
Tumor
0.0
858
Normal
0.0
433
Tumor
0.0
138
Normal
0.0
424
Normal
0.0
456
Normal
0.0
686
Normal
0.0
124
Normal
0.0
525
Tumor
0.0
444
Normal
0.0
297
Tumor
0.0
1013
Tumor
0.0
211
Tumor
0.0
514
Normal
0.0
423
Tumor
0.0
526
Normal
0.0
455
Tumor
0.0
363
Tumor
0.0
352
Normal
0.0
786
Normal
0.0
145
Tumor
0.0
698
Normal
0.0
563
Tumor
0.0
915
Tumor
0.0
878
Normal
0.0
695
Tumor
0.0
647
Tumor
0.0
427
Tumor
0.0
818
Normal
0.0
268
Normal
0.0
342
Normal
0.0
361
Tumor
0.0
956
Normal
0.0
147
Tumor
0.0
953
Tumor
0.0
1043
Tumor
0.0
188
Normal
0.0
823
Tumor
0.0
391
Tumor
0.0
861
Tumor
0.0
884
Normal
0.0
344
Normal
0.0
493
Tumor
0.0
921
Tumor
0.0
355
Tumor
0.0
435
Tumor
0.0
917
Tumor
0.0
328
Normal
0.0
554
Normal
0.0
148
Normal
0.0
545
Tumor
0.0
354
Normal
0.0
357
Tumor
0.0
857
Tumor
0.0
447
Tumor
0.0
627
Tumor
0.0
616
Normal
-0.1
816
Normal
-0.1
488
Normal
-0.1
146
Normal
-0.1
461
Tumor
-0.1
425
Tumor
-0.1
533
Tumor
-0.1
161
Tumor
-0.1
465
Tumor
-0.1
513
Tumor
-0.1
874
Normal
-0.1
428
Normal
-0.1
814
Normal
-0.1
141
Tumor
-0.1
867
Tumor
-0.1
977
Tumor
-0.1
364
Normal
-0.1
943
Tumor
-0.1
494
Normal
-0.1
881
Tumor
-0.1
744
Normal
-0.1
445
Tumor
-0.1
883
Tumor
-0.1
813
Tumor
-0.1
524
Normal
-0.1
365
Tumor
-0.1
224
Normal
-0.1
171
Tumor
-0.1
415
Tumor
-0.1
1041
Tumor
-0.1
538
Normal
-0.1
341
Tumor
-0.1
185
Tumor
-0.1
416
Normal
-0.1
484
Normal
-0.1
383
Tumor
-0.1
477
Tumor
-0.1
478
Normal
-0.1
1045
Tumor
-0.1
527
Tumor
-0.1
487
Tumor
-0.1
925
Tumor
-0.1
343
Tumor
-0.1
914
Normal
-0.1
192
Normal
-0.2
553
Tumor
-0.2
498
Normal
-0.2
313
Tumor
-0.2
283
Tumor
-0.2
483
Tumor
-0.2
492
Normal
-0.2
863
Tumor
-0.2
311
Tumor
-0.3
911
Tumor
-0.3
125
Tumor
-0.3
877
Tumor
-0.3
741
Tumor
-0.4
491
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.