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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT4A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT4A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
101.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
84.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
64.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
59.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
46.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
41.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
40.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
37.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
35.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
35.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
29.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
27.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
27.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
26.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
26.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
25.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
25.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
25.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
24.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
23.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
22.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
21.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
20.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
19.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
19.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
19.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
19.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
18.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
17.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
16.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
15.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
12.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT4A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
58.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
57.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
48.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
47.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
45.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
44.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
42.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
40.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
40.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
38.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
37.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
37.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
36.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
36.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
36.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
34.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
33.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
33.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
33.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
30.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
24.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
23.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT4A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
47.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
45.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
37.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
36.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
35.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
29.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
28.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
27.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
26.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
24.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
20.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
20.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
16.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
15.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
12.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
11.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
11.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
10.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
8.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
7.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
6.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
5.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025290003
Tumor
1.2
CPT0065750003
Tumor
1.0
CPT0086030003
Tumor
1.0
CPT0025170003
Tumor
0.9
CPT0015730003
Tumor
0.8
CPT0078510003
Tumor
0.8
CPT0076330003
Tumor
0.7
CPT0088920001
Normal
0.6
CPT0081880003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0065930003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0006730001
Normal
0.5
CPT0023360001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0079300001
Normal
0.4
CPT0089480003
Normal
0.4
CPT0088640003
Normal
0.4
CPT0087040003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0077140001
Normal
0.3
CPT0078930003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0092740003
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0087050003
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0078940001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0089040001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0065820001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0077500001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0014470001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0077110003
Tumor
-0.3
CPT0025350003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0079480003
Tumor
-0.5
CPT0085670003
Tumor
-0.6
CPT0000640003
Tumor
-0.6
CPT0088900003
Tumor
-0.6
CPT0086950003
Tumor
-0.6
CPT0086870003
Tumor
-0.7
CPT0014450004
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0007320003
Tumor
-0.7
CPT0010160003
Tumor
-0.8
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0024670003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0010110003
Tumor
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0014350001
Normal
N/A
CPT0006950001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0014160003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0078670001
Normal
N/A
CPT0088690003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0001230001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0075170001
Normal
N/A
CPT0088780001
Normal
N/A
CPT0013790003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
