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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP4K4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
279.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
56.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
43.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
36.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
36.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
33.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
26.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
17.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP4K4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
120.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
116.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
107.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
106.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
99.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
98.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
95.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
91.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
90.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
83.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
82.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
81.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
81.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
80.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
77.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
77.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
75.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
74.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
71.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
71.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
71.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
69.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
68.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
67.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
67.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
66.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
66.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
65.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
65.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
64.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
64.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
64.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
64.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
64.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
64.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
63.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
63.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
62.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
62.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
61.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
61.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
61.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
61.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
60.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
60.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
59.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
59.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
59.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
57.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
57.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
57.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
57.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
56.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
56.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
56.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
56.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
55.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
55.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
55.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
55.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
55.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
54.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
53.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
53.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
53.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
52.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
52.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
52.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
52.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
52.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
52.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
52.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
52.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
51.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
51.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
50.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
49.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
49.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
49.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
49.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
49.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
49.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
48.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
48.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
47.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
47.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
47.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
47.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
47.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
47.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
46.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
46.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
46.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
45.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
45.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
45.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
45.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
45.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
45.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
45.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
44.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
44.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
44.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
44.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
43.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
43.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
43.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
43.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
43.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
43.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
43.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
43.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
43.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
42.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
41.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
40.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
40.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
40.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
40.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
40.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
40.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
40.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
39.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
39.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
39.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
39.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
39.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
38.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
38.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
38.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
37.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
37.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
37.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
37.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
37.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
37.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
36.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
36.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
36.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
36.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
36.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
36.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
36.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
36.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
35.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
34.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
34.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
34.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
34.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
33.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
33.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
33.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
33.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
33.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
33.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
33.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
32.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
32.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
32.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
32.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
31.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
31.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
31.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
31.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
31.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
30.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
30.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
30.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
30.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
30.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
30.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
30.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
30.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
29.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
28.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
28.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
28.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
28.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
28.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
27.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
27.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
26.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
26.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
25.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
24.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
24.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
24.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
24.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
23.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
23.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
23.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
23.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
22.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
21.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
20.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
20.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
17.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP4K4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
118.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
117.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
93.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
86.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
80.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
77.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
75.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
68.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
68.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
68.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
67.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
65.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
64.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
63.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
62.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
62.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
61.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
61.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
60.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
60.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
56.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
55.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
53.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
53.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
51.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
51.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
51.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
50.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
49.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
48.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
46.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
46.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
44.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
43.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
43.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
43.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
43.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
42.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
42.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
41.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
41.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
40.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
39.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
36.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
36.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
36.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
33.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
31.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
27.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP4K4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
90.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
85.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
79.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
70.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
65.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
57.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
55.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
55.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
52.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
51.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
50.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
49.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
48.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
48.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
48.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
46.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
46.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
44.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
43.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
43.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
42.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
42.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
42.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
42.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
40.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
39.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
39.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
38.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
36.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
35.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
34.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
34.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
33.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
33.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
33.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
32.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
32.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
32.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
31.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
31.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
31.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
30.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
30.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
30.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
29.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
28.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
27.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
27.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
26.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
24.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
24.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
23.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
23.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
22.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
19.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
16.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
14.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
14.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0066470004
Tumor
1.1
CPT0006630003
Tumor
0.9
CPT0088760003
Tumor
0.8
CPT0077490003
Tumor
0.7
CPT0088630003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0069160003
Tumor
0.7
CPT0092730003
Tumor
0.7
CPT0086030003
Tumor
0.6
CPT0025350003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0015910003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0078830003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0025880003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0079230003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0025290003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0019130003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0092160003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0075170001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0012180003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0012920003
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0001180009
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0009020003
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0079180003
Tumor
-0.5
CPT0078660003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
