HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:47.7 nTPM
HPA Brain:78.0 nTPM
GTEx:47.7 nTPM
FANTOM5:46.7 Scaled Tags Per Million
Pig:62.6 nTPM
Mouse:30.4 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017375
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 78.0
Sample id Sample description nTPM
Hippocampus
nTPM: 73.4
2621 Female, age 67, right hemisphere 85.9
1898 Male, age 80, left hemisphere 78.3
2148 Female, age 91, left hemisphere 76.3
2529 Female, age 94, left hemisphere 71.0
1855 Male, age 76, left hemisphere 69.6
1911 Female, age 85, right hemisphere 59.2
Dentate gyrus
nTPM: 76.1
2530 Female, age 94, left hemisphere 87.1
1927 Female, age 91, both hemispheres 79.5
2531 Female, age 67, both hemispheres 79.4
2010 Male, age 76, both hemispheres 71.4
2528 Male, age 74, both hemispheres 70.7
2246 Female, age 85, both hemispheres 68.6
Entorhinal gyrus
nTPM: 74.9
2613 Female, age 94, left hemisphere 91.2
2764 Male, age 80, right hemisphere 82.7
1938 Female, age 85, left hemisphere 74.5
1787 Male, age 76, left hemisphere 73.6
2686 Male, age 75, right hemisphere 63.9
2117 Female, age 91, right hemisphere 63.4
Hippocampus, CA1
nTPM: 75.8
2749 Male, age 80, left hemisphere 99.0
1873 Female, age 85, both hemispheres 72.7
2045 Male, age 76, both hemispheres 72.6
2527 Male, age 74, both hemispheres 72.0
2082 Female, age 91, right hemisphere 62.5
Hippocampus, CA2
nTPM: 72.7
1963 Male, age 80, left hemisphere 90.5
1892 Male, age 76, both hemispheres 76.7
2437 Female, age 94, left hemisphere 72.8
2249 Male, age 74, both hemispheres 68.0
1940 Female, age 85, left hemisphere 64.7
2113 Female, age 91, right hemisphere 63.2
Hippocampus, CA3
nTPM: 76.0
2620 Female, age 94, left hemisphere 88.5
2137 Male, age 80, left hemisphere 85.0
2861 Female, age 67, both hemispheres 83.9
1867 Male, age 76, both hemispheres 72.2
2436 Male, age 74, both hemispheres 65.5
1891 Female, age 85, both hemispheres 60.6
Parahippocampal cortex
nTPM: 72.2
2245 Female, age 91, both hemispheres 86.0
2532 Female, age 72, left hemisphere 82.5
1850 Male, age 80, both hemispheres 74.7
2250 Female, age 67, right hemisphere 71.7
1990 Female, age 91, right hemisphere 71.4
2693 Female, age 94, both hemispheres 71.2
2622 Female, age 67, right hemisphere 71.1
1933 Female, age 85, both hemispheres 68.0
2692 Male, age 74, both hemispheres 68.0
2018 Male, age 76, both hemispheres 57.3
Perirhinal gyrus
nTPM: 78.0
1794 Male, age 80, right hemisphere 84.1
1847 Female, age 91, left hemisphere 82.5
2521 Female, age 94, right hemisphere 80.0
1841 Female, age 85, right hemisphere 72.0
2848 Male, age 76, right hemisphere 71.6
Subiculum
nTPM: 68.2
2619 Male, age 74, both hemispheres 75.6
2438 Female, age 94, left hemisphere 72.7
1977 Female, age 85, both hemispheres 68.8
1901 Male, age 80, both hemispheres 67.8
2729 Female, age 91, right hemisphere 63.1
2042 Male, age 76, both hemispheres 61.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 83.0
Min nTPM: 25.7
Std nTPM: 10.4
Median nTPM: 46.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 83.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 74.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 73.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 72.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 70.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 70.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 69.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 68.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 68.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 66.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 66.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 46.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.7
FF:10153-102I9 76 years, female 46.8
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 62.6
Pig sample Sample description nTPM
Subiculum
nTPM: 60.4
Samples: 4

Max nTPM: 75.1
Min nTPM: 51.9
Sample A Female 75.1
Sample B Female 55.0
Sample C Male 59.7
Sample D Male 51.9
Dorsal hippocampus
nTPM: 57.7
Samples: 4

Max nTPM: 66.6
Min nTPM: 49.1
Sample A Female 66.6
Sample B Female 59.0
Sample C Male 55.9
Sample D Male 49.1
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 69.0
Min nTPM: 56.5
Sample A Female 69.0
Sample B Female 56.5
Sample C Male 65.5
Sample D Male 59.2
Ventral hippocampus
nTPM: 61.5
Samples: 4

Max nTPM: 75.7
Min nTPM: 48.1
Sample A Female 57.9
Sample B Female 48.1
Sample C Male 75.7
Sample D Male 64.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 30.3
Min nTPM: 29.9
Sample A Male 30.3
Sample B Male 30.0
Sample C Female 30.2
Sample D Female 29.9
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 32.8
Min nTPM: 29.1
Sample A Male 29.9
Sample B Male 29.9
Sample C Female 32.8
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
583864 Antisense, RP_040831_01_C03, Mouse strain C57BL/6J (56 days, male) 7.0

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