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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
224.4
nTPM
HPA Brain:
184.4
nTPM
GTEx:
224.4
nTPM
FANTOM5:
157.4
Scaled Tags Per Million
Pig:
96.5
nTPM
Mouse:
79.4
nTPM
Allen mouse:
14.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
184.4
Sample id
Sample description
nTPM
Amygdala nTPM: 108.3
2517
Female, age 94, left hemisphere
146.8
1987
Female, age 91, left hemisphere
136.5
2514
Male, age 75, right hemisphere
99.4
2814
Male, age 76, right hemisphere
80.1
2695
Female, age 67, right hemisphere
78.9
Basal amygdala nTPM: 184.4
2827
Female, age 67, right hemisphere
234.6
2243
Female, age 91, right hemisphere
218.9
2685
Female, age 94, left hemisphere
211.2
2110
Male, age 80, left hemisphere
167.5
2609
Male, age 75, right hemisphere
150.2
1955
Male, age 76, both hemispheres
123.8
Central amygdala nTPM: 139.5
2826
Female, age 94, left hemisphere
231.6
2239
Male, age 80, left hemisphere
170.5
2515
Male, age 75, right hemisphere
130.7
2701
Female, age 91, right hemisphere
97.8
1905
Male, age 76, both hemispheres
66.6
Corticomedial amygdala nTPM: 179.1
2535
Female, age 67, right hemisphere
244.5
2829
Male, age 80, left hemisphere
226.2
2242
Female, age 91, right hemisphere
200.9
2429
Female, age 94, left hemisphere
165.3
2428
Male, age 75, right hemisphere
139.0
2240
Male, age 76, both hemispheres
98.7
Lateral amygdala nTPM: 148.6
2534
Female, age 94, left hemisphere
217.3
2256
Male, age 80, left hemisphere
182.3
2255
Female, age 91, right hemisphere
153.9
2830
Female, age 67, right hemisphere
149.0
2516
Male, age 75, right hemisphere
94.8
1883
Male, age 76, both hemispheres
94.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
224.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 224.4
Samples: 152
Max nTPM: 638.6
Min nTPM: 7.8
Std nTPM: 109.4
Median nTPM: 208.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
638.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
491.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
483.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
481.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
445.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
440.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
437.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
421.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
411.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
410.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
406.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
398.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
393.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
379.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
377.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
376.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
376.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
374.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
369.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
364.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
361.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
358.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
354.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
354.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
344.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
341.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
335.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
332.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
323.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
321.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
319.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
319.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
311.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
309.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
297.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
287.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
282.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
280.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
280.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
278.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
274.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
273.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
272.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
269.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
268.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
268.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
267.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
263.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
261.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
256.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
256.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
251.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
251.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
250.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
248.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
247.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
247.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
242.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
240.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
237.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
236.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
233.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
228.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
226.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
225.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
225.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
224.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
223.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
223.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
222.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
218.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
217.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
215.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
215.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
212.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
209.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
207.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
207.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
206.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
206.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
202.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
198.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
198.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
197.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
193.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
191.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
190.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
189.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
188.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
184.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
184.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
181.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
179.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
179.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
177.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
176.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
175.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
171.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
170.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
170.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
164.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
161.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
159.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
158.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
156.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
156.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
156.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
154.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
154.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
151.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
149.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
148.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
145.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
144.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
142.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
141.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
140.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
137.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
137.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
137.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
136.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
130.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
128.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
127.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
126.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
125.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
119.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
118.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
116.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
114.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
113.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
110.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
110.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
109.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
107.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
101.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
100.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
99.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
99.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
93.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
91.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
80.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
77.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
71.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
68.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
68.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
66.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
61.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
52.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
43.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
79.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 79.4
Samples: 4
Max nTPM: 83.4
Min nTPM: 76.1
Sample A
Male
76.1
Sample B
Male
81.1
Sample C
Female
83.4
Sample D
Female
77.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.