HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:20.4 nTPM
HPA Brain:19.6 nTPM
GTEx:20.4 nTPM
FANTOM5:75.1 Scaled Tags Per Million
Pig:21.5 nTPM
Mouse:11.0 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004102Antibody CAB010309
Glial cells LowLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.6
2529 Female, age 94, left hemisphere 21.9
1898 Male, age 80, left hemisphere 19.9
2148 Female, age 91, left hemisphere 19.5
2621 Female, age 67, right hemisphere 19.0
1911 Female, age 85, right hemisphere 18.7
1855 Male, age 76, left hemisphere 18.5
Dentate gyrus
nTPM: 17.6
2528 Male, age 74, both hemispheres 20.8
2246 Female, age 85, both hemispheres 19.2
2530 Female, age 94, left hemisphere 19.1
2010 Male, age 76, both hemispheres 17.0
2531 Female, age 67, both hemispheres 16.4
1927 Female, age 91, both hemispheres 13.1
Entorhinal gyrus
nTPM: 15.4
2117 Female, age 91, right hemisphere 24.9
1787 Male, age 76, left hemisphere 16.4
1938 Female, age 85, left hemisphere 14.8
2686 Male, age 75, right hemisphere 14.8
2764 Male, age 80, right hemisphere 11.3
2613 Female, age 94, left hemisphere 10.2
Hippocampus, CA1
nTPM: 16.2
2527 Male, age 74, both hemispheres 19.0
1873 Female, age 85, both hemispheres 17.0
2082 Female, age 91, right hemisphere 16.3
2045 Male, age 76, both hemispheres 15.5
2749 Male, age 80, left hemisphere 13.0
Hippocampus, CA2
nTPM: 17.8
2249 Male, age 74, both hemispheres 22.1
1940 Female, age 85, left hemisphere 21.8
2113 Female, age 91, right hemisphere 18.9
2437 Female, age 94, left hemisphere 18.4
1963 Male, age 80, left hemisphere 13.4
1892 Male, age 76, both hemispheres 12.2
Hippocampus, CA3
nTPM: 18.6
2436 Male, age 74, both hemispheres 24.9
2861 Female, age 67, both hemispheres 20.5
1891 Female, age 85, both hemispheres 18.6
2620 Female, age 94, left hemisphere 17.7
2137 Male, age 80, left hemisphere 16.1
1867 Male, age 76, both hemispheres 14.0
Parahippocampal cortex
nTPM: 14.7
2250 Female, age 67, right hemisphere 24.0
2245 Female, age 91, both hemispheres 15.5
2622 Female, age 67, right hemisphere 15.1
1990 Female, age 91, right hemisphere 14.9
2692 Male, age 74, both hemispheres 14.9
2018 Male, age 76, both hemispheres 14.6
1933 Female, age 85, both hemispheres 12.4
2532 Female, age 72, left hemisphere 12.4
1850 Male, age 80, both hemispheres 12.2
2693 Female, age 94, both hemispheres 11.2
Perirhinal gyrus
nTPM: 12.7
1841 Female, age 85, right hemisphere 13.7
2521 Female, age 94, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.8
1794 Male, age 80, right hemisphere 12.7
1847 Female, age 91, left hemisphere 11.2
Subiculum
nTPM: 17.2
2729 Female, age 91, right hemisphere 23.4
2042 Male, age 76, both hemispheres 20.0
1901 Male, age 80, both hemispheres 17.1
2619 Male, age 74, both hemispheres 17.1
2438 Female, age 94, left hemisphere 13.4
1977 Female, age 85, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 86.6
Min nTPM: 4.4
Std nTPM: 11.4
Median nTPM: 17.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 86.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 76.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 56.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 50.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 47.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 44.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 44.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 43.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 41.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 40.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 75.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.1
FF:10153-102I9 76 years, female 83.8
FF:10169-103B7 60 years, female 66.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.5
Pig sample Sample description nTPM
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 25.4
Min nTPM: 19.4
Sample A Female 25.4
Sample B Female 19.4
Sample C Male 19.4
Sample D Male 20.9
Dorsal hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 24.9
Min nTPM: 15.7
Sample A Female 24.9
Sample B Female 17.4
Sample C Male 23.9
Sample D Male 15.7
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 23.2
Min nTPM: 14.9
Sample A Female 23.2
Sample B Female 14.9
Sample C Male 20.1
Sample D Male 15.0
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.4
Sample A Female 24.0
Sample B Female 16.4
Sample C Male 26.7
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.5
Sample A Male 11.1
Sample B Male 9.5
Sample C Female 11.8
Sample D Female 11.4
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.6
Sample A Male 8.9
Sample B Male 8.6
Sample C Female 10.1
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
2689 Antisense, RP_040420_01_D04, Mouse strain C57BL/6J (56 days, male) 2.4
100144095 Antisense, RP_110421_01_F03, Mouse strain C57BL/6J (56 days, male) 1.3

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