We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELAVL1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
66.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
61.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
60.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
59.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
58.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
58.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
54.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
52.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
50.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
49.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
49.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
49.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
48.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
47.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
47.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
46.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
44.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
44.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
42.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
39.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
39.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
38.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
38.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
37.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
36.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
36.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
35.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
35.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
35.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
34.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
34.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
34.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
34.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
34.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
34.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
34.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
33.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
33.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
33.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
33.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
33.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
32.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
32.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
32.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
32.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
32.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
32.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
32.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
32.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
31.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
31.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
31.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
31.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
31.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
31.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
30.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
30.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
30.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
30.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
30.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
29.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
29.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
29.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
29.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
28.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
28.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
28.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
28.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
27.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
27.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
27.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
27.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
27.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
27.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
27.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
27.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
27.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
27.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
27.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
27.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
27.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
26.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
26.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
25.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
25.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
25.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
25.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
25.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
25.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
25.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
25.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
24.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
24.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
24.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
24.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
24.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
24.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
24.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
24.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
24.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
24.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
24.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
24.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
24.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
24.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
24.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
23.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
23.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
23.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
23.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
23.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
23.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
23.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
23.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
22.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
22.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
22.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
22.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
22.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
22.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
22.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
22.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
22.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
22.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
22.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
22.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
21.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
21.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
21.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
21.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
21.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
21.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
21.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
21.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
21.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
21.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
21.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
21.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
21.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
21.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
21.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
21.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
20.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
20.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
20.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
20.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
20.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
20.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
20.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
20.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
19.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
19.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
19.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
19.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
19.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
19.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
19.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
19.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
19.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
19.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
19.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
19.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
19.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
18.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
18.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
18.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
18.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
18.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
18.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
18.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
18.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
18.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
18.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
18.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
17.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
17.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
17.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
17.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
17.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
17.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
16.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
16.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
16.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
16.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
15.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
15.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
15.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
15.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
15.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
15.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
15.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
15.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
15.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
15.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
15.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
14.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
14.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
13.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
13.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
13.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
13.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
13.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
13.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
12.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
12.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
12.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
11.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
11.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
11.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
8.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
7.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ELAVL1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
18.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
16.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
14.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
13.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
12.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
12.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
11.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
10.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
10.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
10.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
9.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
8.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
7.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
7.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
6.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
6.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
5.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
331
Tumor
0.8
743
Tumor
0.8
443
Tumor
0.8
777
Tumor
0.7
615
Tumor
0.7
313
Tumor
0.7
277
Tumor
0.6
463
Tumor
0.6
123
Tumor
0.6
665
Tumor
0.6
357
Tumor
0.6
983
Tumor
0.6
523
Tumor
0.6
271
Tumor
0.6
865
Tumor
0.6
663
Tumor
0.6
267
Tumor
0.5
425
Tumor
0.5
285
Tumor
0.5
431
Tumor
0.5
661
Tumor
0.5
647
Tumor
0.5
393
Tumor
0.5
423
Tumor
0.5
131
Tumor
0.5
351
Tumor
0.5
515
Tumor
0.5
365
Tumor
0.4
141
Tumor
0.4
641
Tumor
0.4
445
Tumor
0.4
221
Tumor
0.4
161
Tumor
0.4
487
Tumor
0.4
881
Tumor
0.4
187
Tumor
0.4
467
Tumor
0.4
627
Tumor
0.4
171
Tumor
0.4
461
Tumor
0.4
433
Tumor
0.4
527
Tumor
0.4
877
Tumor
0.4
953
Tumor
0.4
863
Tumor
0.3
297
Tumor
0.3
367
Tumor
0.3
755
Tumor
0.3
137
Tumor
0.3
353
Tumor
0.3
737
Tumor
0.3
671
Tumor
0.3
545
Tumor
0.3
727
Tumor
0.3
375
Tumor
0.3
977
Tumor
0.3
147
Tumor
0.3
815
Tumor
0.3
451
Tumor
0.3
391
Tumor
0.3
814
Normal
0.3
513
Tumor
0.3
125
Tumor
0.3
724
Normal
0.3
427
Tumor
0.3
383
Tumor
0.3
813
Tumor
0.2
465
Tumor
0.2
311
Tumor
0.2
113
Tumor
0.2
355
Tumor
0.2
1013
Tumor
0.2
617
Tumor
0.2
497
Tumor
0.2
785
Tumor
0.2
557
Tumor
0.2
434
Normal
0.2
395
Tumor
0.2
444
Normal
0.2
873
Tumor
0.2
464
Normal
0.2
455
Tumor
0.2
563
Tumor
0.2
517
Tumor
0.2
411
Tumor
0.2
436
Normal
0.2
135
Tumor
0.2
1015
Tumor
0.2
213
Tumor
0.2
342
Normal
0.2
385
Tumor
0.2
358
Normal
0.2
567
Tumor
0.2
217
Tumor
0.2
1027
Tumor
0.2
222
Normal
0.2
883
Tumor
0.1
352
Normal
0.1
447
Tumor
0.1
192
Normal
0.1
923
Tumor
0.1
185
Tumor
0.1
491
Tumor
0.1
112
Tumor
0.1
635
Tumor
0.1
268
Normal
0.1
258
Normal
0.1
921
Tumor
0.1
172
Normal
0.1
571
Tumor
0.1
298
Normal
0.1
343
Tumor
0.1
394
Normal
0.1
911
Tumor
0.1
435
Tumor
0.1
424
Normal
0.1
426
Normal
0.1
867
Tumor
0.1
387
Tumor
0.1
553
Tumor
0.1
943
Tumor
0.1
188
Normal
0.1
384
Normal
0.1
344
Normal
0.1
481
Tumor
0.1
913
Tumor
0.1
468
Normal
0.1
136
Normal
0.1
967
Tumor
0.1
261
Tumor
0.1
195
Tumor
0.1
1031
Tumor
0.1
642
Normal
0.1
327
Tumor
0.1
211
Tumor
0.1
666
Normal
0.1
223
Tumor
0.1
162
Normal
0.1
695
Tumor
0.1
628
Normal
0.1
432
Normal
0.1
466
Normal
0.1
354
Normal
0.1
456
Normal
0.1
452
Normal
0.1
262
Normal
0.1
132
Normal
0.1
648
Normal
0.1
878
Normal
0.1
148
Normal
0.1
965
Tumor
0.1
341
Tumor
0.1
392
Normal
0.1
138
Normal
0.1
742
Normal
0.1
388
Normal
0.0
1045
Tumor
0.0
218
Normal
0.0
386
Normal
0.0
428
Normal
0.0
272
Normal
0.0
314
Normal
0.0
191
Tumor
0.0
446
Normal
0.0
196
Normal
0.0
414
Normal
0.0
232
Normal
0.0
912
Normal
0.0
366
Normal
0.0
412
Normal
0.0
422
Normal
0.0
396
Normal
0.0
715
Tumor
0.0
142
Normal
0.0
278
Normal
0.0
114
Normal
0.0
818
Normal
0.0
361
Tumor
0.0
882
Normal
0.0
744
Normal
0.0
664
Normal
0.0
356
Normal
0.0
786
Normal
0.0
421
Tumor
0.0
636
Normal
0.0
332
Normal
0.0
416
Normal
0.0
1025
Tumor
0.0
616
Normal
0.0
146
Normal
0.0
741
Tumor
0.0
573
Tumor
0.0
186
Normal
0.0
111
Normal
0.0
756
Normal
0.0
376
Normal
0.0
866
Normal
0.0
462
Normal
0.0
564
Normal
0.0
1016
Normal
0.0
364
Normal
0.0
473
Tumor
0.0
214
Normal
0.0
362
Normal
0.0
572
Normal
0.0
568
Normal
0.0
415
Tumor
0.0
713
Tumor
0.0
672
Normal
0.0
662
Normal
0.0
231
Tumor
0.0
478
Normal
0.0
1046
Normal
0.0
224
Normal
0.0
558
Normal
-0.1
1014
Normal
-0.1
721
Tumor
-0.1
312
Normal
-0.1
618
Normal
-0.1
126
Normal
-0.1
363
Tumor
-0.1
937
Tumor
-0.1
328
Normal
-0.1
738
Normal
-0.1
483
Tumor
-0.1
514
Normal
-0.1
368
Normal
-0.1
984
Normal
-0.1
884
Normal
-0.1
982
Normal
-0.1
858
Normal
-0.1
864
Normal
-0.1
917
Tumor
-0.1
128
Normal
-0.1
954
Normal
-0.1
127
Tumor
-0.1
493
Tumor
-0.1
851
Tumor
-0.1
546
Normal
-0.1
574
Normal
-0.1
257
Tumor
-0.1
728
Normal
-0.1
1043
Tumor
-0.1
1042
Normal
-0.1
145
Tumor
-0.1
723
Tumor
-0.1
955
Tumor
-0.1
518
Normal
-0.1
471
Tumor
-0.1
714
Normal
-0.1
472
Normal
-0.1
981
Tumor
-0.1
284
Normal
-0.1
874
Normal
-0.1
1021
Tumor
-0.1
857
Tumor
-0.1
922
Normal
-0.1
685
Tumor
-0.1
124
Normal
-0.1
686
Normal
-0.1
526
Normal
-0.1
498
Normal
-0.1
915
Tumor
-0.1
978
Normal
-0.1
914
Normal
-0.1
778
Normal
-0.1
516
Normal
-0.1
535
Tumor
-0.1
868
Normal
-0.1
746
Normal
-0.1
538
Normal
-0.1
1032
Normal
-0.1
528
Normal
-0.2
534
Normal
-0.2
488
Normal
-0.2
1041
Tumor
-0.2
861
Tumor
-0.2
824
Normal
-0.2
957
Tumor
-0.2
698
Normal
-0.2
212
Normal
-0.2
862
Normal
-0.2
474
Normal
-0.2
228
Normal
-0.2
966
Normal
-0.2
286
Normal
-0.2
227
Tumor
-0.2
926
Normal
-0.2
1028
Normal
-0.2
482
Normal
-0.2
537
Tumor
-0.2
697
Tumor
-0.2
492
Normal
-0.2
951
Tumor
-0.2
484
Normal
-0.2
524
Normal
-0.2
964
Normal
-0.2
975
Tumor
-0.2
448
Normal
-0.2
554
Normal
-0.2
938
Normal
-0.2
1026
Normal
-0.2
716
Normal
-0.2
536
Normal
-0.2
1022
Normal
-0.2
852
Normal
-0.2
696
Normal
-0.2
976
Normal
-0.2
963
Tumor
-0.2
944
Normal
-0.2
494
Normal
-0.2
477
Tumor
-0.2
283
Tumor
-0.2
925
Tumor
-0.2
817
Tumor
-0.3
1044
Normal
-0.3
918
Normal
-0.3
924
Normal
-0.3
916
Normal
-0.3
722
Normal
-0.3
816
Normal
-0.3
533
Tumor
-0.3
956
Normal
-0.3
958
Normal
-0.3
525
Tumor
-0.3
952
Normal
-0.3
968
Normal
-0.4
823
Tumor
-0.4
745
Tumor
-0.4
413
Tumor
-0.9
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
