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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
204.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
411.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
404.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
400.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
355.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
351.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
344.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
341.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
339.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
338.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
337.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
335.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
323.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
320.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
310.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
304.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
292.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
289.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
272.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
258.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
243.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
241.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
240.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
232.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
226.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
225.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
225.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
225.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
220.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
216.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
214.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
209.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
200.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
200.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
195.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
186.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
182.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
182.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
178.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
175.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
166.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
162.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
154.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
153.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
145.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
142.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
132.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
116.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
109.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
108.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
108.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
107.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
105.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
103.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
102.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
90.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
85.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
79.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
78.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
69.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
55.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
53.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
43.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
387.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
387.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
291.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
223.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
206.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
203.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
195.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
186.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
165.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
158.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
156.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
153.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
131.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
128.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
121.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
115.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
114.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
108.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
100.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
96.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
94.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
93.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
92.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
90.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
83.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
78.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
78.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
77.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
73.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
73.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
73.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
72.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
72.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
70.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
69.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
69.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
65.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
65.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
65.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
64.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
63.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
62.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
62.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
62.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
62.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
60.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
60.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
60.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
59.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
59.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
59.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
59.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
59.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
59.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
58.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
57.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
57.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
57.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
57.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
57.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
56.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
56.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
56.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
56.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
56.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
55.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
55.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
54.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
54.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
54.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
54.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
54.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
53.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
53.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
53.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
53.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
53.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
52.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
52.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
52.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
51.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
51.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
51.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
51.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
51.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
50.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
50.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
50.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
50.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
50.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
50.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
50.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
49.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
49.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
48.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
48.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
48.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
48.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
48.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
48.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
48.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
48.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
48.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
47.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
47.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
47.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
47.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
47.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
47.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
46.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
46.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
46.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
45.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
45.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
45.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
45.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
45.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
45.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
45.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
45.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
45.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
45.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
44.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
44.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
44.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
44.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
43.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
43.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
43.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
43.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
43.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
43.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
43.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
42.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
42.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
42.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
42.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
42.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
42.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
42.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
41.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
41.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
41.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
41.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
41.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
41.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
40.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
40.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
40.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
40.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
40.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
40.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
40.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
39.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
39.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
39.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
39.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
39.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
39.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
39.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
39.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
39.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
39.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
39.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
38.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
38.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
38.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
38.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
38.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
38.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
37.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
37.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
37.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
36.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
36.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
36.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
36.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
36.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
36.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
36.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
36.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
36.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
36.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
36.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
36.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
35.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
35.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
35.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
35.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
34.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
34.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
34.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
34.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
33.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
33.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
33.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
33.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
33.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
32.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
32.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
32.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
32.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
31.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
31.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
31.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
31.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
31.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
31.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
31.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
30.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
30.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
30.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
30.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
30.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
30.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
29.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
29.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
28.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
28.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
27.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
27.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
27.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
27.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
26.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
26.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
26.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
26.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
26.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
25.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
24.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
23.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
23.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
23.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
23.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
22.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
22.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
22.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
21.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
21.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
122.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
94.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
78.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
77.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
71.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
71.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
70.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
68.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
67.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
67.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
66.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
66.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
64.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
63.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
61.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
59.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
59.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
58.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
58.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
56.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
55.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
55.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
54.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
52.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
52.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
52.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
50.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
50.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
48.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
46.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
45.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
43.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
43.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
42.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
42.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
42.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
41.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
40.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
40.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
39.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
38.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
38.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
35.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
33.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
28.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
27.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
20.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBC1D1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
411.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
327.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
115.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
111.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
111.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
87.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
74.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
70.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
68.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
66.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
64.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
62.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
61.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
58.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
57.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
54.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
53.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
52.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
51.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
50.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
49.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
49.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
49.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
48.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
47.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
46.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
45.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
45.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
44.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
43.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
43.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
43.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
43.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
43.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
42.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
42.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
42.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
40.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
39.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
39.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
38.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
37.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
36.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
36.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
36.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
35.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
35.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
35.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
34.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
33.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
33.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
33.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
33.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
33.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
32.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
32.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
32.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
31.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
31.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
31.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
30.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
28.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
27.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
26.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
23.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
22.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
21.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
20.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
19.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
19.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
17.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
2.4
CPT0078660003
Tumor
2.0
CPT0088970003
Tumor
1.5
CPT0001190001
Normal
0.5
CPT0075570001
Normal
0.4
CPT0079430001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0079510001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0084590001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0000660001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0069190001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0088550004
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0006950001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0001270001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0086890003
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0082010001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0065450001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0088920001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0078530001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0000890001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0078990003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0081600003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0006440003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0021240003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0078800003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0025230003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0081880003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0009000003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0086950003
Tumor
-0.7
CPT0002270011
Tumor
-0.7
CPT0001340003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.