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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDIA5 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
128.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
100.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
85.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
84.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
83.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
82.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
81.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
78.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
76.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
75.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
72.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
70.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
69.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
67.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
67.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
67.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
66.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
66.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
65.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
65.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
64.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
64.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
63.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
63.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
63.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
63.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
62.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
61.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
60.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
59.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
58.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
58.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
57.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
56.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
56.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
55.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
53.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
53.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
53.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
52.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
52.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
52.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
52.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
52.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
52.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
51.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
51.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
51.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
50.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
50.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
49.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
49.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
49.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
48.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
48.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
47.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
47.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
47.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
47.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
46.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
46.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
46.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
46.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
46.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
45.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
45.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
45.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
45.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
45.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
45.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
45.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
45.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
45.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
44.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
44.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
44.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
44.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
44.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
43.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
43.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
43.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
43.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
43.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
42.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
42.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
42.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
42.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
42.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
42.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
41.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
41.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
41.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
40.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
40.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
39.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
39.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
39.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
39.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
39.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
39.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
39.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
39.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
39.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
39.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
39.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
38.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
38.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
38.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
38.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
38.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
38.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
38.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
38.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
37.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
37.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
36.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
36.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
36.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
36.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
36.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
36.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
36.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
36.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
35.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
35.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
35.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
35.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
35.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
35.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
35.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
35.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
35.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
35.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
35.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
34.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
34.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
34.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
34.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
34.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
33.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
33.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
33.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
33.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
33.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
32.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
32.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
32.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
32.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
31.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
31.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
31.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
31.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
31.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
31.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
31.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
31.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
31.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
30.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
30.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
30.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
30.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
30.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
30.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
30.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
30.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
29.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
29.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
29.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
29.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
29.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
29.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
29.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
29.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
29.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
29.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
28.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
28.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
28.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
28.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
28.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
28.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
28.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
28.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
28.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
28.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
28.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
28.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
27.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
27.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
27.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
27.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
27.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
26.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
26.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
26.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
26.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
26.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
26.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
26.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
26.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
26.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
26.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
25.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
25.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
25.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
25.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
25.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
25.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
25.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
24.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
24.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
24.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
24.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
24.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
24.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
24.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
24.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
24.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
24.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
23.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
23.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
23.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
23.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
23.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
23.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
23.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
23.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
23.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
22.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
22.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
22.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
22.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
22.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
22.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
22.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
22.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
22.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
22.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
22.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
22.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
21.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
21.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
21.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
21.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
21.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
20.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
20.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
20.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
20.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
20.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
20.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
20.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
20.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
19.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
19.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
19.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
19.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
18.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
18.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
18.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
18.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
18.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
18.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
17.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
17.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
17.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
17.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
16.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
16.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
16.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
16.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
15.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
15.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
15.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
15.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
14.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
14.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
14.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
14.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
13.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
13.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
12.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
12.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
12.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
8.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDIA5 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.3
Number of samples
231
Samples
Sample
Description
TPM
DO45179
0 years, female, NA, stage:2, alive, 600 days
122.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
91.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
80.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
78.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
77.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
75.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
75.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
70.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
70.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
66.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
65.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
62.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
61.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
61.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
60.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
60.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
59.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
59.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
58.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
57.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
57.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
57.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
57.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
56.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
56.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
51.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
50.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
50.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
48.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
48.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
48.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
47.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
47.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
47.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
47.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
47.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
46.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
46.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
46.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
46.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
45.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
45.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
45.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
45.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
44.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
43.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
43.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
43.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
43.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
43.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
42.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
42.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
41.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
41.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
41.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
41.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
40.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
40.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
40.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
40.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
39.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
39.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
39.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
39.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
39.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
39.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
39.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
38.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
38.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
38.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
38.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
37.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
37.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
37.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
37.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
37.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
36.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
36.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
36.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
35.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
35.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
35.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
35.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
35.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
34.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
34.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
34.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
34.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
34.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
34.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
34.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
34.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
33.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
33.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
32.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
32.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
32.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
32.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
32.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
32.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
31.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
31.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
31.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
31.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
29.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
29.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
28.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
28.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
28.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
28.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
28.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
27.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
27.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
27.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
27.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
27.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
27.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
27.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
26.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
26.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
26.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
26.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
25.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
25.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
25.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
25.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
25.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
24.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
24.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
24.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
24.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
24.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
24.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
23.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
23.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
23.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
23.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
23.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
23.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
23.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
23.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
23.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
22.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
22.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
22.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
22.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
22.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
22.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
22.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
22.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
22.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
21.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
21.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
21.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
21.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
21.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
21.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
20.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
20.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
20.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
19.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
19.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
19.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
19.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
19.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
19.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
18.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
18.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
18.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
17.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
17.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
17.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
17.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
17.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
17.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
16.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
16.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
14.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
13.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
13.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
12.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
9.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
727
Tumor
1.2
445
Tumor
0.9
186
Normal
0.7
745
Tumor
0.7
636
Normal
0.7
452
Normal
0.7
554
Normal
0.7
878
Normal
0.6
358
Normal
0.6
912
Normal
0.6
737
Tumor
0.6
742
Normal
0.6
448
Normal
0.6
938
Normal
0.6
426
Normal
0.6
778
Normal
0.6
142
Normal
0.5
568
Normal
0.5
744
Normal
0.5
1022
Normal
0.5
572
Normal
0.5
376
Normal
0.5
332
Normal
0.5
937
Tumor
0.5
286
Normal
0.5
696
Normal
0.5
518
Normal
0.5
698
Normal
0.5
952
Normal
0.5
124
Normal
0.5
984
Normal
0.5
1014
Normal
0.5
922
Normal
0.5
944
Normal
0.5
746
Normal
0.5
342
Normal
0.5
412
Normal
0.4
648
Normal
0.4
128
Normal
0.4
864
Normal
0.4
723
Tumor
0.4
111
Normal
0.4
314
Normal
0.4
618
Normal
0.4
112
Tumor
0.4
546
Normal
0.4
148
Normal
0.4
368
Normal
0.4
862
Normal
0.4
196
Normal
0.4
462
Normal
0.4
1016
Normal
0.4
926
Normal
0.4
968
Normal
0.4
756
Normal
0.4
672
Normal
0.4
1043
Tumor
0.4
114
Normal
0.4
738
Normal
0.4
955
Tumor
0.4
147
Tumor
0.4
356
Normal
0.4
686
Normal
0.4
534
Normal
0.4
1026
Normal
0.4
1027
Tumor
0.4
528
Normal
0.4
463
Tumor
0.4
446
Normal
0.3
494
Normal
0.3
464
Normal
0.3
866
Normal
0.3
1046
Normal
0.3
113
Tumor
0.3
982
Normal
0.3
526
Normal
0.3
1032
Normal
0.3
857
Tumor
0.3
662
Normal
0.3
468
Normal
0.3
714
Normal
0.3
214
Normal
0.3
716
Normal
0.3
422
Normal
0.3
1044
Normal
0.3
414
Normal
0.3
852
Normal
0.3
1028
Normal
0.3
392
Normal
0.3
664
Normal
0.3
232
Normal
0.3
132
Normal
0.3
882
Normal
0.3
432
Normal
0.3
666
Normal
0.3
818
Normal
0.3
918
Normal
0.3
137
Tumor
0.3
981
Tumor
0.3
488
Normal
0.3
436
Normal
0.3
388
Normal
0.3
352
Normal
0.3
484
Normal
0.3
222
Normal
0.3
954
Normal
0.3
298
Normal
0.3
786
Normal
0.3
924
Normal
0.3
424
Normal
0.2
558
Normal
0.2
284
Normal
0.2
228
Normal
0.2
642
Normal
0.2
481
Tumor
0.2
956
Normal
0.2
628
Normal
0.2
574
Normal
0.2
136
Normal
0.2
146
Normal
0.2
966
Normal
0.2
514
Normal
0.2
425
Tumor
0.2
354
Normal
0.2
466
Normal
0.2
1015
Tumor
0.2
824
Normal
0.2
394
Normal
0.2
728
Normal
0.2
363
Tumor
0.2
272
Normal
0.2
858
Normal
0.2
958
Normal
0.2
172
Normal
0.2
195
Tumor
0.2
162
Normal
0.2
472
Normal
0.2
564
Normal
0.2
261
Tumor
0.2
456
Normal
0.2
524
Normal
0.2
538
Normal
0.2
138
Normal
0.2
428
Normal
0.1
884
Normal
0.1
616
Normal
0.1
874
Normal
0.1
964
Normal
0.1
285
Tumor
0.1
868
Normal
0.1
344
Normal
0.1
816
Normal
0.1
863
Tumor
0.1
364
Normal
0.1
258
Normal
0.1
721
Tumor
0.1
617
Tumor
0.1
1021
Tumor
0.1
492
Normal
0.1
126
Normal
0.1
218
Normal
0.1
212
Normal
0.1
1042
Normal
0.1
755
Tumor
0.1
482
Normal
0.1
516
Normal
0.1
224
Normal
0.0
393
Tumor
0.0
777
Tumor
0.0
474
Normal
0.0
813
Tumor
0.0
914
Normal
0.0
722
Normal
0.0
467
Tumor
0.0
497
Tumor
0.0
278
Normal
0.0
978
Normal
0.0
976
Normal
0.0
396
Normal
0.0
433
Tumor
0.0
277
Tumor
0.0
221
Tumor
0.0
357
Tumor
0.0
416
Normal
0.0
851
Tumor
0.0
312
Normal
0.0
713
Tumor
0.0
435
Tumor
0.0
262
Normal
0.0
545
Tumor
-0.1
328
Normal
-0.1
743
Tumor
-0.1
447
Tumor
-0.1
434
Normal
-0.1
536
Normal
-0.1
362
Normal
-0.1
916
Normal
-0.1
953
Tumor
-0.1
384
Normal
-0.1
975
Tumor
-0.1
131
Tumor
-0.1
366
Normal
-0.1
431
Tumor
-0.1
478
Normal
-0.1
125
Tumor
-0.1
943
Tumor
-0.1
915
Tumor
-0.1
223
Tumor
-0.1
695
Tumor
-0.1
353
Tumor
-0.1
387
Tumor
-0.1
444
Normal
-0.1
386
Normal
-0.1
471
Tumor
-0.2
188
Normal
-0.2
415
Tumor
-0.2
963
Tumor
-0.2
443
Tumor
-0.2
515
Tumor
-0.2
785
Tumor
-0.2
465
Tumor
-0.2
145
Tumor
-0.2
423
Tumor
-0.2
921
Tumor
-0.3
268
Normal
-0.3
498
Normal
-0.3
185
Tumor
-0.3
913
Tumor
-0.3
873
Tumor
-0.3
421
Tumor
-0.3
135
Tumor
-0.3
567
Tumor
-0.3
647
Tumor
-0.3
192
Normal
-0.3
615
Tumor
-0.3
1025
Tumor
-0.3
523
Tumor
-0.3
487
Tumor
-0.3
741
Tumor
-0.3
517
Tumor
-0.3
461
Tumor
-0.4
814
Normal
-0.4
911
Tumor
-0.4
341
Tumor
-0.4
257
Tumor
-0.4
665
Tumor
-0.4
477
Tumor
-0.4
227
Tumor
-0.4
217
Tumor
-0.4
331
Tumor
-0.4
867
Tumor
-0.4
563
Tumor
-0.4
663
Tumor
-0.4
527
Tumor
-0.4
283
Tumor
-0.4
951
Tumor
-0.4
815
Tumor
-0.5
171
Tumor
-0.5
411
Tumor
-0.5
557
Tumor
-0.5
455
Tumor
-0.5
191
Tumor
-0.5
573
Tumor
-0.5
267
Tumor
-0.5
313
Tumor
-0.5
327
Tumor
-0.5
533
Tumor
-0.5
1031
Tumor
-0.5
1041
Tumor
-0.5
865
Tumor
-0.5
483
Tumor
-0.5
271
Tumor
-0.5
977
Tumor
-0.6
343
Tumor
-0.6
917
Tumor
-0.6
525
Tumor
-0.6
923
Tumor
-0.6
451
Tumor
-0.6
685
Tumor
-0.6
187
Tumor
-0.6
925
Tumor
-0.6
141
Tumor
-0.6
297
Tumor
-0.6
983
Tumor
-0.6
365
Tumor
-0.6
493
Tumor
-0.7
627
Tumor
-0.7
671
Tumor
-0.7
823
Tumor
-0.7
1045
Tumor
-0.7
965
Tumor
-0.7
213
Tumor
-0.7
127
Tumor
-0.7
881
Tumor
-0.8
724
Normal
-0.8
877
Tumor
-0.8
473
Tumor
-0.8
161
Tumor
-0.8
883
Tumor
-0.8
355
Tumor
-0.8
427
Tumor
-0.8
571
Tumor
-0.8
491
Tumor
-0.8
957
Tumor
-0.8
311
Tumor
-0.8
817
Tumor
-0.8
413
Tumor
-0.8
361
Tumor
-0.8
537
Tumor
-0.9
635
Tumor
-0.9
391
Tumor
-0.9
395
Tumor
-0.9
641
Tumor
-0.9
861
Tumor
-0.9
513
Tumor
-0.9
211
Tumor
-0.9
375
Tumor
-1.0
697
Tumor
-1.0
351
Tumor
-1.0
1013
Tumor
-1.0
231
Tumor
-1.0
367
Tumor
-1.1
383
Tumor
-1.1
123
Tumor
-1.2
385
Tumor
-1.2
967
Tumor
-1.2
535
Tumor
-1.2
661
Tumor
-1.3
715
Tumor
-1.3
553
Tumor
-1.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
